Seriola lalandi dorsalis (Yellowtail amberjack): 111644218
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Entry
111644218 CDS
T06058
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111644218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111644218
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111644218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
Sina_RING
UvrD_C
Zn_ribbon_FGT1_2
T3SS_TC
DUF1664
Motif
Other DBs
NCBI-GeneID:
111644218
NCBI-ProteinID:
XP_023248761
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MQRKEEVNFGGAAMSLPADLSCLQGGGGADREAALATLEKQLICPICLELFNKPVVILPC
QHNLCRKCANELYQPSLFQARTTMMVNSGRFRCPSCRHEVVLDRHGVYGLQRNLLVENII
DIYKQEVSNNDNATSPLPLPPPPALPTCSDHEGERVNIYCLTCQVPTCSLCKVFGAHQSC
QVAPLTDIYQQQKDELSGGVSSLVAVNDKIQALIDELEETCRNIEENCKAQKQSVCDKFS
RMVSILDERHKAMTQRISSEQEEKTGHAQALVRCYGDSVEANAKLMERAASSMEEPDMAA
FVQNSRELITKVIAATSSCPTEMLTPGYENISDYKFNFSRQERALKSIDFIKAVEEPEDE
PEPEEPKEPSEPKHHQETSAQNLDSAVGPVKDTTPALISAPAEPVQTAAPTPALMPAAPG
LSRDSVEADLQPETDDADLNDEGLGRIKNKREEERDEGCAAADSVKEANICEHQEGMSTQ
QAVTLLFYLLAFLVILQRVWVYIGCFICT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaggaagaggtgaacttcggcggggcggccatgtcactgccggcggacctg
agctgcctgcagggcggcgggggagcagatcgtgaggcggcgctggcgacgctggagaaa
cagctgatctgcccgatctgcctggagctgttcaacaaaccggtggtgatcctgccctgc
cagcacaacctctgcaggaagtgtgccaacgagctctaccagccctccctgttccaggct
cggaccaccatgatggtgaacagcggccgtttccgctgtccgtcctgcagacacgaagtg
gtgctggatcgccacggcgtctacggccttcagcggaacctgctggtggagaacatcatc
gacatctacaaacaggaagtcagcaacaacgacaacgccacaagccccctccctcttcct
ccgcctcccgctctgccaacatgctcagaccacgagggtgagagggtgaacatctactgt
ctcacctgtcaggttcccacctgttctctctgcaaagtgttcggggctcatcagtcctgt
caggtggctcctctgacagacatctaccagcagcagaaggatgagctgagcgggggagtc
agttctctggtggcggtcaacgataaaatccaggctctgatcgatgagctggaggagacc
tgcagaaacatagaggagaactgtaaggctcagaaacagagtgtgtgtgacaagttcagc
cgcatggtctccatcctggacgagaggcacaaggcgatgacacagcgaatcagctccgag
caggaggagaagacaggccacgcccaggcgttggtgcgttgctatggagacagtgtggag
gccaacgccaagctgatggagagagcagcgagcagcatggaggagccggacatggctgct
tttgtgcagaattcaagagagctgatcacaaaagtgatcgcagcgaccagctcgtgtccg
accgagatgctgacaccaggatatgagaatattagcgactacaaatttaacttcagcaga
caggagcgagctctgaagagcatagactttattaaagctgtggaggaaccagaggatgaa
ccagagccagaagaacccaaagagcccagtgaaccaaaacaccatcaggaaacctccgcc
cagaacctggactctgctgtaggaccagttaaagacacaaccccagcactgatatcagca
ccagcggaaccagttcagacagcagcaccaacaccggccctgatgccagcagctccagga
ctgtcaagagactctgtggaggcagatctgcagccagagaccgacgacgcagacttgaac
gatgagggattaggtcggattaagaacaagagggaggaggagagagatgagggatgtgca
gctgctgactctgttaaagaggcgaacatctgtgaacatcaggagggaatgagcacgcaa
caggctgtcactctgctcttctacctgttggccttcctggtcatcctgcagagggtttgg
gtttacatcggctgcttcatttgcacataa
DBGET
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