Seriola lalandi dorsalis (Yellowtail amberjack): 111644322
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Entry
111644322 CDS
T06058
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111644322 (trpm5)
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111644322 (trpm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
DUF7695
Motif
Other DBs
NCBI-GeneID:
111644322
NCBI-ProteinID:
XP_023248927
Ensembl:
ENSSLDG00000008679
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MSAMQQRQDTPLGTLQPQTRCLRCGDVLEWSEEHSVLLGCSCCSTVDETLENVARGLASR
MKRERSHWAAGRVGDIDFVGSTKTRGKFMRVSSNTDPVLIYQMLTEEWGLAPPHLVVALV
GGDEVAQMKPWLRDTLRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSSKV
RVVAIGIAPWNMIHDRQALLTAKPDEPVAYKPQDLPHGSVYSLDSHHSHFVLVEEDPNRA
GATSEMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPKILKRMYKGIGNSTPWLILA
GSGGVADILVTLMNKGCWDTDSVHELLLDTFPNAHHSTDISNWVKLIQKILDHGHLLTVH
DPEQESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFNGDVEWKA
CDLEEVMMDALINDKPDFVRLFVDNGVNLGEFLTYGRLQELYWCVSEKSLLHNLLLKKYE
EKQLLLGAARSPGPPGHHPPEQGKPRFTLYEVAKVLKDFLHDSCKGFYQKSPTEKPAKGR
LFHSQKNLAELEERSEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKILKEMA
RLESEAESARSMKEAKYEQFALDVFGECYSNSEDRAYALLVRRTHCWSKSTVLNLATEAD
AKSFFAHDGVQALLTKIWWGAMTTDTAISKLVVSFFCPPLIWTNLIKFSDEELDNRNGRE
QFVELDSLDTEKALLLTDDDDPLDSPPGDPAAQSCASVWWRFLIRRWRRFWSAPVTVFLG
NVIMYFAFLCLFTYVLLLDFRPPPPSGPGAPEIMLYFWVFTLVLEELRQSFFTDEEMSIL
KKFKLYVEDNWNKCDMVAISLFVVGVSCRMVDHTYEAGRTVLAIDFMVFTLRLIHIFAIH
KQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRIDWVFRRALYRPYLH
IFGQIPLEEIDAARMPEINCTDDSEEIIMGLRPPCPNIYANWLVILLLVIFLLVTNVLLL
NLLIAMFSYTFQVVQGNTDIFWKFQRYNLIVEYHSRPALAPPFIIISHLSQILLSLVKQP
ESKQEHLERELPAGLDQRLITWETVQKENYLAKLERQHWESSEERLKSTSSKVQSLLRIV
SGFKDQEKRLASMEAQVRYCGEVLSWMAECFAQSTLKCGKEAPRSPPSLTGYKASSSNDA
AQGEPEKEDKQDRGEAKPGHPGYGANKKFPYIDE
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccatgcagcagagacaagacacacctctggggacactgcagccgcagacacgc
tgcctgagatgtggcgacgtactggagtggtcggaggagcacagcgtcctgctgggctgc
tcctgctgctccacggtggatgagacactggagaatgtagccagaggcctggccagcaga
atgaagagggagaggagtcactgggccgccggacgagtgggcgacatcgacttcgttggc
tccacaaagacgagaggaaagtttatgagggtgtccagcaacacggacccggtgctgatc
taccagatgctgacggaggagtggggcctggctcctccacacctggtggtggcactggtg
ggaggagatgaggtggctcagatgaagccctggctcagggacactctgagaaaaggactt
gtgaaggctgcacagagcacaggtgcatggattttaactaatggccttcgctttggcatc
accaagcacttgggccaggcggtgagagatcactccttggcgagcacctcctctaaagtt
cgagtagtggccattggcatcgcaccatggaacatgattcacgaccgacaagctctcctc
actgccaagccggacgagcctgtcgcgtacaagccacaggacctgcctcacgggtcggtc
tactccctggacagccaccactctcactttgtgctggtggaggaggatcccaacagagcg
ggagccaccagcgagatgagggtgaagctgctcaagcacatctctcttcagcgcactggt
tacggaggcgcggggagttttgagatccctgttctgtgtctcttggtccacggggaaccc
aagatcctaaagaggatgtataaaggcattggcaattcaacaccatggctgatcctggca
ggctcgggaggcgtggccgacatcctcgtcacgctgatgaataaggggtgctgggatacg
gacagtgttcacgagctgctgctggacacctttccaaatgcccaccacagcacagacatc
agtaactgggtcaagctgatccagaagatacttgatcacgggcatctcctcaccgtgcac
gaccccgagcaggagagctcggagctggatacagtcattctcaaagctctcgtcaaggct
tgtaagagccaaagtcaggaagctcaggacttcctggatgaactgaagctggctgtggcc
tggaaccgggtggacatcgccaagagtgacatcttcaacggggatgtggagtggaaggcg
tgcgacctggaagaggtgatgatggacgcgctgatcaatgacaaaccagactttgtgcgc
ctttttgtggacaacggggtgaacctgggcgagttccttacgtacggtcgcctgcaggag
ctctactggtgcgtgtcagagaagagcctgctgcacaacctgctcctcaaaaagtacgag
gagaagcagctcctgctcggagccgccaggtcgcccggtccacctgggcaccacccgccc
gagcaggggaaaccccgcttcaccctgtacgaggtcgccaaggtgctgaaggacttcctc
catgactcctgcaaaggcttttaccagaagagtcccacagagaagccggcgaagggtcga
ctgttccacagccagaagaacctggctgagttagaggagcgctctgaacatccttggagg
gatctcttcctctgggccgtccttcagaaccgacagcagatggctaactacttttgggcc
atgggccctgaggcggttgcggcagcgctggcgggttgtaagattctgaaagagatggca
cgactggaatctgaggctgagtctgcacgcagcatgaaggaggccaagtacgagcagttt
gcacttgatgtctttggagagtgttactcaaacagtgaagacagagcttatgctttgttg
gtgaggagaacacactgctggagcaaatctacagtcctcaacctggcaacagaggcagac
gccaaatccttctttgcccacgacggagtgcaggctctcctcacaaagatttggtggggg
gcgatgacgacagacacggccatctccaaactagtggtgtctttcttctgtccgccgctc
atctggaccaacctcataaagttcagtgacgaggaacttgacaaccgcaacggccgcgag
cagtttgtggagctggacagtctggatacagagaaggctttactgttgactgacgatgat
gaccctctggactctccacctggagatccagcagctcagagctgtgcctctgtctggtgg
cgtttcttaatccgccgctggcgtcgcttctggagcgctcccgtcaccgtgttcctcggt
aacgtcatcatgtacttcgccttcctctgcctcttcacctacgtgctcctgcttgacttc
cgcccaccgccgccctctggtcccggggccccggagatcatgctctacttctgggtcttc
acattggtgctggaggagcttcggcagagctttttcacggatgaagagatgagcatcttg
aagaagttcaagctctatgtcgaggacaactggaacaagtgcgacatggtcgccatctca
ctctttgttgttggggtttcatgcaggatggtcgatcacacctatgaggcagggaggacc
gtgctggccatagacttcatggtcttcactctacgtctcatccacatctttgccatccac
aagcagctcggccccaagatcattattgtggagagaatgatgaaggatgttttcttcttc
ctcttcttcctgagcgtgtggctcattgcgtacggcgttgccacccaggctctcctccac
cccaacgaccccaggatcgactgggtgtttcgcagagccttgtaccgcccctacctgcac
atcttcggtcagatccccttggaggaaatagatgctgctcgcatgcctgaaattaactgc
accgatgactcagaggagattatcatgggcctacggccgccgtgtcccaacatctatgcc
aactggctggtcattctgttgctggttatcttccttcttgtcaccaatgtcctgctgctc
aatctgcttattgccatgttcagctacacattccaggtagtgcagggcaacacggacatc
ttctggaagttccagagatacaacctgatagtggaataccacagccgtccggcactggct
ccgcccttcatcatcatcagccacctctctcagatcctcctcagcctggtcaaacagccc
gagtccaagcaggagcacctggagagggagctgccggcagggctagaccagaggctgata
acatgggagacggtgcagaaagagaactacctggccaaactggagcgccagcattgggaa
agcagtgaggagagactcaagagcacctcctctaaggttcagagcttgctgaggattgtc
agtgggtttaaggaccaagagaaacgactggcatccatggaggctcaggtcagatattgt
ggagaggtgttgtcctggatggcagagtgctttgctcagagcacactcaagtgtgggaaa
gaagctccgagatctccaccatcgctaacaggctacaaggcgagcagctccaacgacgca
gctcaaggagaaccagagaaagaagacaaacaggacagaggggaagccaaaccgggtcac
ccgggatacggagctaacaaaaaatttccttacattgatgaataa
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integrated database retrieval system
