Seriola lalandi dorsalis (Yellowtail amberjack): 111644442
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Entry
111644442 CDS
T06058
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111644442
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111644442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
111644442
NCBI-ProteinID:
XP_023249091
Ensembl:
ENSSLDG00000011936
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MGAKMIQIKGSICSAALLKLLLLAALALGAGGKTLRYKVYEEQKVGTVIARLREDVAGVL
SKLPSSLTFRFRAMQRGSTPFLSVREEDGEISIGTKIDREKLCEKNLNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFSRAIVPIEISESASVGTRIPLDGAVDADVGENSLHTYS
LTPNNFFKIEVRTRTDGAKYAELAVMRELDREVQSSYQLQLTASDNGMPPKSGSTLLKIS
ISDSNDNSPAFDEQAYIINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKINPENGHITLIKRVDYETTASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISEGAPVDTFIALVRVEDSDAGLNGEVVCRLHGHGHFRLQKTYEKNY
MILTNISLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPRFEKSHYEVFKS
ENNSPGAYLMTVVASDPDLGTNGQVTYTIIDAMVQGSPISTYVTIDPSNGAIYALRSFDH
EDVSRIAFTVQARDGGNPVLSANTTVLLTVLDENDNPPIIHSPSLQNHTAEILVWKYASP
GQLITTLKVTDRDAGANGELSCAIVGGNEDGLFVMDARRCELRTNASLEQAPRDVMEVKV
EVQDRGTSRMSTGALLRLSLQENMDILPPLYPTGSSQASMDLSLIVIISLGAVCALLLIV
MVMFATARCSREKKDPRHNYNCRVAESSYQNHPKKPARQIHKADITLVPTVNGTLPVRAH
PRSPSASPTPERGTLGSRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLL
SMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMDR
LLGEGFTEIYAPDGQHRPHAAMRLCTEECRVLGHSDQCWMPPLASPASTSSDYRSNLYIP
GEEARQTADLSQEKTPQPCTDTGTARNQSFSTFGKDLGGEDGGEEEGGEDGGAEDRDEDL
CGTTSLLSEMSSVFQRLLPQGLDSYVQVNENQKGTSLSGVGVPMTGSLDRRRGHLPGKPS
PSVHQQGVAAWAANTHFQNPGSSIGPSGHHQGGSYHTLKPSTKLGSQSNSHKGLQAPKNS
PQNSGHTPKPHSSPLLTALVSPTLMQPSPAPVAVPLPLPGPSCKWLPAMEEIPENYEEDD
FDSVLSHLQGKRSDSRHELVDASELVAEINKLLQDVRQS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaaaatgatccaaatcaagggaagtatttgctctgcggctctgctcaaactc
ctgctcctcgccgcgctcgcgctcggcgcaggcggtaagactttgagatacaaagtttac
gaggagcagaaagtcggcacggttattgcacggttaagggaggatgtagccggggtttta
tccaaactaccgagttccttgacctttcggttccgcgccatgcaacgagggagtacgccg
ttcctgtcggtccgggaggaggacggggagatcagcattggcaccaaaatcgaccgtgag
aagctttgtgagaaaaacttgaactgctcgattgaattcgacgtggtcacgctccccacg
gagtacctgcagctgttccatgtggaagtggaagtgctggacattaacgacaactccccg
cacttctcccgcgccattgtccccatcgagatctccgagagcgcatctgtggggacgcgc
atcccgctggacggcgcagtggatgcggacgtcggagagaactctttgcacacttactcc
ttaacacccaataacttctttaagattgaggtgcggacccggacggacggggcgaagtat
gcagagctggcggtgatgagggagctggaccgggaggttcagtccagctaccagctgcag
ctcacagcctcggataatggtatgccccccaagtctggctccactctgctcaaaatcagc
atttctgattccaacgacaacagcccagcctttgatgagcaggcttatatcatcaatctg
ctggaaaactccccccttgggactctaatcattgatttaaacgccacagatccagacgag
ggcactaatgggaagatagtctactctttcagcagccatgtctcgccaaaaatcctggag
acatttaaaataaatccagaaaacggccacattactcttattaaaagagtggactatgaa
accaccgcgtcctatgagctggatgttcaggctcaggacttaggccccaactctatccct
ggactttgcaaaattgtggtgaaggtggtggatgtaaatgacaacaaaccggagataaac
atcaacctgatgacgcctggcaaagaggaagtggcctacatttcagagggggcccccgtg
gacaccttcatagctctggtgcgtgttgaagacagcgacgcggggctcaacggcgaggtg
gtgtgcaggctgcacggccacggccacttcagactccagaagacgtacgagaagaactac
atgatcctcaccaacatctcgttggaccgggagaagaggtcggagtacagtctgacggtc
atagccgaggaccggggctctcccagcctctccaccatcaaacatttcaccgttcaggtt
ctggatgaaaacgacaatcctccacgtttcgagaagagtcactatgaggtctttaaatcg
gagaacaactccccaggagcctacctgatgaccgtggtggcctcagatccagatctgggc
accaatggccaagtcacttacaccatcatagacgccatggtccaagggagccccatctcc
acctatgtcaccattgacccctccaatggcgccatctacgccttgcgcagctttgaccac
gaagacgtcagccggatcgccttcacagttcaggcacgtgacgggggaaaccctgtgctg
tctgcgaacaccaccgtcctcctgactgttctggatgaaaacgacaacccgcctatcatc
cactccccctccctccagaatcacaccgctgagattctggtgtggaagtacgcgtcgccg
ggtcagctgatcaccacgcttaaagtcacagaccgcgacgccggcgccaatggagagttg
agctgcgccattgttggcggcaatgaggatgggctgtttgtgatggacgcccggcggtgt
gagctcagaaccaacgccagcttggagcaggctcctcgggatgtgatggaggtcaaggta
gaagtgcaggacagaggcacgagtcggatgtccacgggggccctcctcaggctctccctg
caggagaacatggacatcctcccccctctctaccccaccggctccagccaggcctccatg
gatctctccctcatcgtcatcatctctctgggtgccgtttgcgctctgctgctcatcgtc
atggtgatgtttgccaccgcccgctgcagccgggagaagaaagaccccagacacaactac
aattgccgtgtggcagagagcagctaccagaaccaccccaagaagcccgccaggcagatc
cacaaggctgacatcaccctggtccccactgtcaacgggactctgcctgtgcgggctcac
ccacgctccccctcggcctccccgacacctgagaggggcaccctggggagcaggcagagc
catcacagccgccagtcactcaacagtctggtcaccatctcctccaatcatgtgccggag
aattttgccttggagctggcccacgccacgcctcctgtagagcaagtctcacagcttctg
tccatgctccatcagggccagtaccagccacgacccagcttcagaggcaacaaatacacc
aggagctacagatacgccctgaatgagatggataagttcagtctgaaggacagcggccgc
ggagacagcgaggccggggacagcgactacgagccgggcagggagtcacccatggacagg
ctcctcggtgagggctttactgagatatatgcccctgatggccagcacagaccgcatgca
gctatgaggctctgcacagaggagtgtcgtgtcctgggtcactcagatcagtgctggatg
ccccccctggcctccccggcctcgacgtcttccgactaccgcagcaacctctacatcccc
ggggaagaagcccgccaaactgctgacctctcacaggaaaagaccccgcagccctgcact
gacaccggaaccgcccggaaccagagcttctccaccttcggcaaggacctgggtggagag
gacggcggcgaagaggaggggggagaagacggcggggctgaggacagagatgaagacctg
tgcgggaccacgtcgctgttgtcagagatgagcagtgtgttccagaggttgcttccccag
ggtctggactcgtacgtccaagtcaacgagaaccagaaagggactagcctgagcggtgtg
ggtgtacccatgactggatctttagaccgcaggaggggccatctacccggcaagcccagt
ccctctgtccaccagcagggcgtggcggcctgggctgccaacacccacttccagaacccg
ggaagcagcattggcccatctggccaccaccagggtggcagctaccacaccctgaaaccc
agcaccaagctcggctcccagagtaacagccacaagggcctgcaggcccccaaaaacagc
cctcagaacagcggccacacccccaaaccccacagcagccccctgctcacggcgctggtc
agccccactctgatgcagccgtcccctgcccccgtggcggtaccgctcccgctccccggg
ccctcctgcaagtggttacccgccatggaggagatcccagagaactacgaggaagacgac
tttgactctgtgctcagccacctgcagggcaaacgcagcgacagccgccacgagctggtg
gacgccagcgaactggtggctgagatcaacaaactcttacaggacgtccggcagagctag
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