Seriola lalandi dorsalis (Yellowtail amberjack): 111644855
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Entry
111644855 CDS
T06058
Symbol
grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04020
Calcium signaling pathway
slal04080
Neuroactive ligand-receptor interaction
slal04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111644855 (grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111644855 (grin2c)
04082 Neuroactive ligand signaling
111644855 (grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111644855 (grin2c)
Ion channels [BR:
slal04040
]
Ligand-gated channels
Glutamate (ionotropic)
111644855 (grin2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
111644855
NCBI-ProteinID:
XP_023249581
Ensembl:
ENSSLDG00000007128
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPLLLLLFCTVPCCSGRPFGIPSPSVNVAVVFSGSAYQTEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNIGSEAVAQILDF
ISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYETYVDYIKSFTDTSYFMWDLQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCS
HEEAQYLFSMATEAGLVGPGYIWIIPSLAVGNPDNPPPDSFPVGLISIITDRWRMSLRKR
VRDGVAIVVKGVQSFRKQRGFIPEGHSDCHNPIKPSAANDTLFRHMLNVTWEHNDFSFNS
NGYLVNPAMIIITLDRERQWDKVGNYEMGILQMRYPVWPRYGSYLEPVSDYRHLTVATLE
ERPFVIVEAVDPITGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLSRT
IKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVE
TGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSLVT
AKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLA
AFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQ
KGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSR
WKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGL
SLLVFAWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEHTDRNGSMPSPDVTTNY
TQANMLKMLKTAKDMVSSARVENSLDNATKTIENWSRRGGDNVRAGLPPRVTTTDMTHGR
LPYISSITDNHSPYPQRALTPTFPLHYGDTSTQPLLDKPRVVTRPTPLRYTLPARSSQHV
LERTLPISSLSSPHIAMRDPAPSGTPTPHHSSRLYVENQARHPTSPFVPYREFQVPDIYV
EHRGPLRRKFSYPPDCVSRRRRSHSYVFDAADPRVRADYDEPRSCLAELRANHLLSNHAS
DAAAAMACTARHYPGGSTSCSSCMKSYLEPEMDDIPLLGKDKLNRRASFLRATWGNDRIH
QVDETKPSTSTSASTRVNMPDLFPRVVVANPKPHKLYGSLGHNLSCYPLAAEPAYLDPAH
MGSYPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGP
LAQGPSQLYDGSKDMCHLFPCTSHCPDNAAMLPRMSDRQVVYHNNMFGAYEGTGKREDPG
PGSRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccgtggtggccgccgccgctgctgctg
ctgctgttctgcactgtcccctgctgttcgggccggccgtttgggattccctcgccctcc
gtgaacgtggcggtggtgttcagcggctcggcctaccagacggagattaaggggcggcta
agccgggaaaacttcatggacctgcctctggaggtcaaccccatcactgtgctggtcaac
aacaccaatccacgggcgctgctcacgcgcatctgtgacaccctctccaccaaccgcgtc
catggcgtggtgtttgaggacaacattggctcggaggccgtggcacagatcttggacttc
atttccactcagacagctgtgcccattgtgggcatcagtggaggctctgctgtcgtcctg
ccatacaagggcgaaggctccaacttcctgcagctgggctcctccatcgagcagcagatc
aacggcatgttcaaggtgatggaggagtacaactgggacagctttgtggtcataaccagc
ctctacccgggctatgaaacctacgtggattacattaagtccttcactgacaccagctac
ttcatgtgggacctgcaggacgtgctgaccttcgacatgtctgccgacggcatgaacgac
atccgagcacgtaggctgctgcagcagatcgacgcccaggtgttgttggtctactgctca
cacgaagaggcccagtatctgttttccatggcgacagaggccggactagtggggccgggc
tacatctggattattcccagcttggctgtgggaaacccggacaaccccccacctgacagc
ttccctgtggggctcattagcatcatcacagaccggtggaggatgagcctgaggaagagg
gtgcgggacggggtggccatcgtggtgaaaggcgtgcagagcttccggaaacagaggggc
ttcattcctgagggccacagtgattgtcacaatcccatcaagccatcagctgctaatgac
actctgttcaggcacatgttgaatgtaacctgggaacacaacgacttctccttcaacagt
aacggttacctggtgaatccagccatgataattatcactctggacagagagagacagtgg
gacaaggtggggaactatgagatggggatcctccagatgagataccccgtgtggccgcgg
tacggctcctacctggaaccagtgtcggattacaggcatctgacggtggccacgctggag
gagcggccctttgtcatcgtggaggcagtggaccctataactggtacatgtgtcagcaac
accgtaccctgccgacgacaatccaacaaaactgaggccattgtgggtcacacggagcca
tacacaaaactgtgctgtaagggcttctgcatagacatcctgaagaagttgtcccgcacc
attaagttctcctacgacctctacctggtcaccaacggcaagcacggcaaactggtgcgg
ggcatttggaacgggatgatcggagaggtgttctacaagcgggcggacatggccatcggc
tccctgactataaacgaagagcgctccgagattattgacttctcggtgccgtttgtggag
acagggatcagcgtgatggtggccagaagtaacgggactgtctcaccatctgccttttta
gaaccatacagtccggcggtttgggtgatgatgttcgtcatgtgtctgactgttgtggct
atcacggtctttgtctttgaatactgcagtccagttgggtacaaccgcagcctggtcaca
gccaaagatcccggaggtcccaccttcaccattgggaagtcagtgtggctgctatgggga
atcgtcttcaacaactcggtccccatcgagaatccaaaggggaccaccagtaagatcatg
gtcctggtgtgggctttcttcgctgtcatcttcctggcttcctacacagccaacctggca
gccttcatgatccaggagcaatacatcgacaccgtctctggactgagtgacaaaaagttt
caaaagccacaggagcagtaccctccgttccgctttggtacggtcccaaatggcagcaca
gagcgcaacataaggagtaactaccccgagatgcactcccacatggtcaaatacaaccag
aagggagtagaggatgcccttaacagcctcaaaacagggaaactggatgcctttatctat
gatgctgctgtgctgaattacatggctggcaaagatgagggctgcaagctggtgaccatt
ggcagtggtaaagtgtttgctaccactggttatggcatcgccctgcagaaggattcacgc
tggaaacgacccatcgacctggccctgcttcagttcctggctgatggtgacacacaaaag
ctccagaccgtctggctcacaggcatctgccgtaatgagaagaaagaggtgatgagcagt
aagctggacattgacaatatggcaggagtcttctacatgctcctcgtggccatgggcctg
agcctgctggtttttgcttgggaacatctgctctactggaaactacgacattcagtccgc
aaatcagagcgcctggacttcctcctggctatcagtagaggcatctacagctgcttcaat
ggagtagagcacactgaccgcaacgggagcatgccgagtccagacgtcactaccaactat
acgcaagctaatatgctaaagatgctgaagacagccaaggacatggtgtcctcggccaga
gtggagaactctctggacaatgccaccaaaacaatagagaactggagcaggcgcgggggc
gacaatgtgcgggctggcctgccacccagggtgacgaccacagacatgacccacggccgt
ctaccctacatctccagcatcactgacaaccactcgccgtaccctcagagggccctcacg
ccgacgttcccgcttcattatggtgacacctccacccagcccctcctcgacaagccgcgc
gtggtgacccggcccaccccgctccgctacacgctgcccgcccgcagcagtcagcacgtc
ttagagaggactctgcccatctccagcctcagtagtcctcacatcgccatgagggacccc
gctccctcgggtacacctaccccgcaccacagcagcaggctgtatgtggagaaccaggcc
cggcaccccacgtccccttttgttccttacagggagtttcaggtgcctgatatctacgtg
gagcacagaggaccgctgaggaggaagtttagctacccgcctgactgtgtgagccggagg
aggaggtcgcacagctatgtgttcgatgctgcagaccccagagtgagggctgactatgat
gaacctcgatcctgccttgctgagttgagggccaatcatctcctgagcaaccacgcctct
gatgctgctgctgccatggcctgcactgcgagacactacccaggcggtagcaccagctgc
agctcctgtatgaagtcttacctggagccggaaatggatgatataccactcctggggaag
gacaaactcaaccgacgagcctcattcctcagagccacatggggcaacgataggatccat
caggtggatgaaacaaagccctccacgtccacatctgcctccacccgcgtaaacatgcct
gacctgtttccacgggtggtagtggccaacccaaagccccacaagctatacggcagtttg
gggcacaacctgtcctgctatcccttggctgctgagccggcctacttggacccagcccac
atgggctcctacccctacaagcaaaagctcaagtactctgaatccacccggctgccctcg
tacagggaagccatcctgcagaatgccgcagccctgcgccgctcctcctccacagtggtg
cacagacactactccacctacctaaactcgtacacagacttaccagtgtatgtggggccg
ctggcccagggaccatcccagttgtatgacggttccaaggacatgtgccacttgtttccg
tgtacaagccactgcccagataatgcagcgatgctgcctcgtatgagtgacaggcaggtg
gtgtaccacaacaatatgtttggggcctacgagggcacaggaaagagggaagacccaggc
cctgggagcagagagcggaggcaggtgttggtggcgcggagagtcaacagtccctatgtg
ccaaagccctggggcagggtatccagcctggagtctgaggtctga
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