Seriola lalandi dorsalis (Yellowtail amberjack): 111645115
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Entry
111645115 CDS
T06058
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03420
Nucleotide excision repair
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111645115 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
111645115 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111645115 (ercc8)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111645115 (ercc8)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111645115 (ercc8)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111645115 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
111645115
NCBI-ProteinID:
XP_023249946
Ensembl:
ENSSLDG00000020580
UniProt:
A0A3B4YE98
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLGFLTARQAGLDDPLRLRRAESTRRVLSLKLNPDRDVDRIHGNGINTIDIEAIEGRYML
SGGADGVIVIYDLENYSGKPQYTCKAVCTVGRSSQNVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGSLFTLDQHSGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNDSRKRLQFTV
SRGCSPEFVFVPCGSSIAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPALRASDVEEELHCANTAAAGQSSVNPAFQDAWSDED
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttgggatttctgacagcgagacaggctgggctggatgaccctctgcgactgcgacgt
gcagagtcaacgagaagggtcctcagtctgaagttgaatcctgacagagatgtggataga
atccatggaaatggcatcaacaccattgacattgaagcgatagagggcagatacatgttg
tctggaggagcagatggagtgatcgttatctatgacctggagaactacagtgggaaacca
cagtacacctgcaaggcagtctgcacagtaggcagatctagccagaatgtccacaaattc
agtgtagagaccgttcagtggtatccttacgacacaggcatgtttgtctccagttccttt
gataagaccatgaaggtctgggacactgagacactgaagcctgctgaagtctttgagttt
gagggtaatgtctacagccaccacctgtcccccatcgccaggaagcacagcctcattgca
gttggcaccaaaaaccctaaaatccagttgtgtgacctgaagtctggctcacggattcat
gttcttcagggtcacagagcagaggtcctgtctgtgcgatggtcgcccagatacgagcac
atattggccactgcgagtgcagacagcaaggtgaaagtatgggatgtgcgccgggcttct
ggtagtctcttcactctggaccagcacagtggagataagtcaaaagcctcctctgaggca
gtaaacacagcccataatggcagagtgaatggcctgtgcttcactggtgatggcctctac
ctcctcacaactggaactgatgaccgcatgagactatggaatagtgccactggggaaaac
acactggtgaattacgggaaggtctgcaacgacagtcgtaaaaggctacagttcacagtg
tcacgtggctgcagccctgagtttgtgtttgtgccatgcggcagctccattgcagtgtat
gccctccacactggagagctggtcactatgctcaggggtcactacaacaatgtcgattgc
tgtgagttccacccagactaccaggagctgtatagtggaggtaaagactgtaacatcctg
gcgtgggttcctgccctccgtgcctcagatgtggaagaagagttacactgtgcaaatacg
gctgctgctggccagtcttcagtgaaccctgcctttcaggacgcatggagtgatgaagat
taa
DBGET
integrated database retrieval system
