KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111645143
Entry
111645143         CDS       T06058                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111645143 (atxn2)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111645143 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 111645143
NCBI-ProteinID: XP_023249980
LinkDB
Position
Unknown
AA seq 1153 aa
MSMKAGGNRSKPGGGNAAGAPASGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV
HVLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSPEPSIGPRKEDIVESII
FKASDVVVVTFKDVDLNFARKVSSDTDNFTDAAVSGRINGEHKEKDLEPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDNSEEFLKREARAAQL
AEEIEASATYKARVALENDDRSEEEKYTAVVRGERETHTLSRENKYIPPGQRNREAMSWG
PGRQNSPRLTQSSAGPSTPRPGPHDYSPSSGADQRVVNGGSSHWPSPCPSPSSRPPSRYQ
SGPSSLPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRMS
SEGPPRMSPKSQRTPRAHRVPPSRTTGVPPGVDLISHNAPGEVPVTPPTRSNSSGGTWSS
VVSGAHRPRSPRQNNMGGASPGSSSLPSPQTGTAPVETAATPTSVSSPTAASPAPNMVAS
PSGDAKECRVQETRQTSPTANKENIKPLDSSPSITRPVCKGPPSMAPDHRKQIDNLKKFS
VDFRLQSSSNPDPAFDQMMTKPPRDQADKPKDLPLDKASTVGREGTEEGVVGIAAGTPGG
APAPSTTTTNTSKPGSPAALSPSPSAPDQKRAGLDVTSQGVQTTSTFSGPKHEEKEEKKE
AVQDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQQPPAVYSQTVCF
PQMYPLTPVSPGVQKSIIWKSPAMYQVQMPHMTVSQSKPYRPGKVPNMTQQRSDQHHPPG
TPTMMHPATAAGPPIVAPSPAYSTQYFTCSPQQFTSQPLVQQMPHYQSQPQHVFSPVMQG
SARMMAPPTHGQPSLVSSSTTQYPEQTHTMYVSPGPMPQQYPHPSATLHPHPQHPQPSAT
PTGQAQQGGPPQHGGPPSHPAASPVQHPQHPQAAAAAAAAQALHLANQPPQQQMYSALAP
TPPSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNPNHMAHVQQAHMQSGIVPSHHPA
PTHPPMMLMATQGPPGGPQPPMPQTALNPIPVSSTTHFSYLAHPQERRLDIVSFYTEGTL
GRNLLQPHHQQQL
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgcagcaagcccggcggtggcaacgccgctggtgcc
cctgcctccggtgccggaggaagcggcggtggaagacagaatctgggcaggggaagacac
agtggtaaaggtcctgcagcagtcattttcaatggtgtatatgcaaatatgaggatggtc
catgtcttgacgtcagtggtggggaccaagtgtgagctgaaagtgaagaacggagcagtc
tatgaaggagtatttaagacatacggtccagagtgtgacttggtgttggatgcagcccac
aggaagagcccagagccgagcataggccccaggaaagaggatattgtggagagcatcatt
ttcaaggcctcagatgtggtagtagtgaccttcaaagacgtggacctgaatttcgccagg
aaagtctcctctgatacagacaacttcacagatgcagcggtgagtggtaggatcaatggt
gagcataaagagaaagatctagagccctgggatggaggagagacccacaactctgacagc
cttgagtctctggatacagatgtgtcaaatgggtgggaccctaatgacatgttcaagtac
aatgaggagaagtatggagtcttgtctacatatgacagcagcctgtccacatatacggtc
cccctggagcgggacaactcagaggagttcctcaagagggaagcgcgtgctgcccagctg
gcagaggagattgaggccagtgctacatacaaggcccgtgtggccctggagaatgatgac
cgctctgaggaggagaaatatactgctgtggtgcgaggggaaagggagactcacacactt
agcagagagaataagtacattcctccaggtcagaggaacagggaggcgatgtcatggggg
ccgggacgccagaattcacctcgtctgactcagagctcagctgggccctcaactcctcga
ccaggacctcatgactacagtcccagctccggtgctgaccagagggtggtgaacggaggt
tcatcccattggccctcaccctgtccgtctccttcctcccgccccccctctcgttaccag
tctggcccctcctccctgcctcctcgggcaaccacgcccacccggccaccctccagaccc
ccctctcgaccttccaggcctccctctcattcatcccacccctcctatccctcctcctca
tcctccttttcccaccatgggcccacgtcgccagcctccactctgcccaaacgcatgtct
tcagaaggtccacccaggatgtctccaaaatcccagcggacgcctcgtgctcacagagtg
ccacccagccggaccactggagtccctccaggagtggacttaatttcccacaatgcccct
ggggaggtaccagtgactcccccaactaggagcaactcctctggaggcacatggtcctca
gtggttagcggagctcacagacctcgctccccacgacagaataatatgggtggggcgtcc
cctggctcctcctccctcccgtcaccccagacaggaacagctcctgtggaaactgctgct
acaccaacatcagtttcctctcctactgctgctagccctgctcccaacatggttgcctct
ccatcaggagatgcaaaagagtgtcgtgttcaggagacaagacaaacatcccccacggca
aacaaggagaacatcaagcctttggacagctcacctagtatcaccagaccagtctgtaaa
ggacccccttctatggcaccagaccacagaaaacaaatagataatttaaagaaatttagt
gtagattttaggttgcagtctagttcaaacccagaccctgcctttgaccagatgatgacc
aagccacccagagatcaagcagacaagcctaaagaccttcccctggacaaagcctccaca
gtggggcgagagggcactgaagagggtgttgtagggattgctgctggcacccccggtggt
gcccctgctccatccactaccaccacaaacaccagtaagcctggcagccctgctgcactg
tccccgtctccctcagccccggaccaaaagagggcagggctggatgtgacatcgcaggga
gttcagacgacatccacattcagtggacccaagcatgaagagaaagaggagaaaaaggag
gctgtacaagatcaagtgagaaaatcaaccttgaacccaaatgccaacgagttcaaaccc
aggttcaatacacagcccaaaccagccaacaccccaacacccccccgacctcagggtcag
cccagcccctccatcgtggtccagcagcccccggctgtttacagtcagacagtctgcttc
ccccagatgtatcccctcacaccagtcagccctggagtgcagaaaagcataatatggaag
tctccagctatgtaccaggttcagatgcctcatatgacggtcagccagtctaaaccctac
agaccaggtaaagtacccaacatgacccagcagaggtcagaccagcaccacccaccaggc
acgcccaccatgatgcacccagcgacggcagcaggaccacctattgtagcaccaagcccc
gcctactctacccagtacttcacctgcagcccgcagcagttcaccagtcagccgctggtc
cagcagatgcctcactaccagtcacagccgcagcatgtgttcagtccagtaatgcagggg
agcgccaggatgatggcacctcctacgcacggacaacccagcctcgtctcttcctcaact
acacagtacccagagcagacacacaccatgtatgtgtctccagggccgatgcctcagcag
tacccccaccccagcgccaccttgcaccctcatccacagcacccccagccctctgccacg
cctacaggccaagcccagcagggtggtcccccacaacatggaggtcctcctagccatcca
gctgccagcccagtccagcacccacagcacccgcaggcagcagcagcggcagcagcagcc
caggccctccacctggccaaccagcccccacagcagcagatgtactcagccttggcgccc
acgcccccctccatgaccccggggcccaaccctcagtctccccaggcatcgttcccctct
gcccagcagactgtctatatccacccgcagcaggtgcagcacggctacaaccccaaccac
atggcacacgtgcagcaggcccatatgcagtctggtatagtaccgtctcaccacccggca
cccacccaccccccgatgatgctgatggctacccagggtcctccagggggtccacagcca
cccatgccccagactgccctcaaccccatccctgtttcctccaccacacatttctcctac
ctggcacatccacaagaacgaagactggatattgtcagcttttacactgaaggcacatta
ggaagaaatctcttgcagcctcatcatcagcagcagctgtag

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