Seriola lalandi dorsalis (Yellowtail amberjack): 111645318
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Entry
111645318 CDS
T06058
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111645318 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111645318 (pnpt1)
03016 Transfer RNA biogenesis [BR:
slal03016
]
111645318 (pnpt1)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111645318 (pnpt1)
Messenger RNA biogenesis [BR:
slal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111645318 (pnpt1)
Transfer RNA biogenesis [BR:
slal03016
]
Prokaryotic type
tRNA degradation factors
111645318 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
111645318
NCBI-ProteinID:
XP_023250231
Ensembl:
ENSSLDG00000023385
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MRYLLRLGPSFARLHVRLCHQSVYNSHANPRTVGVDLGEKKLEISSGKFARFADGSAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPAGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRVG
MVDGELLINPSRAEMTSSSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IIQAIQQLVREQKVTKRTPVKVFSAPTDMVEHVRQIASERIYAVFTDYTHDKISRDEAVN
KIRLETEEDVKEKFPQAEHFEVIESFNVVSKEVFRNLVLNEYRRCDGRELTALRNISCNV
DLFRPLHGSALFQRGQTQVLCSVTFDSLESSVKADIITTALSGVKDKNFMLHYEFPPYAT
NEIGKVGGINRRELGHGALAEKALRPIIPKDFPFTIRVSAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAVGLISKANPEKPSDIQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQGTVAKREILGIMNKCIVKPRETRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPSPGAMNEAQDFISEICKDDQE
QQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGKQIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMGSSNSQTTGSDL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttactccgtctggggccttcgtttgcccgtcttcatgtccgcttatgtcac
cagagtgtgtacaacagccacgcaaacccacgaacagtgggagtggaccttggggaaaag
aaacttgagatctcttcagggaaatttgccaggtttgctgatggatctgctgtagtacag
ctgggggatacctctgtgatggtgactgctgtgagcaaaaccaaaccttctccgtctcag
ttcatgcctcttgtggtggactacagacagaaagcagctgctgcaggtcgaatccccact
aactacttgaggcgagagctgggcaccaccgacaatgagattctcaccagcagactaata
gacagatctattagaccacttttccctgctggctacttttatgacactcagatcctttgc
aacctgctagctgttgatggtgtcaatgatccagatgtgctggctattaatgcagcttcc
gctgctctggccctgtctgacatcccctggaacggacccataggtgctgtgcgtgtgggc
atggtcgatggagagttgcttatcaacccctccagggcagagatgacttccagcagtctt
aatctgattgtggctggagcccccagcagtcaagtggtgatgattgaggcgtcagctgag
aacgtgctgcagcaggacttctgccatgcggtcaaggtgggagtcaaacacacccagcag
atcatacaggccatccagcagctggtgcgagaacagaaggtcaccaagcgcaccccggtc
aaggtgttctcagccccgactgacatggtggaacatgttcggcaaatagcttctgagagg
atctatgctgttttcactgattacacacatgataagatttctagagatgaagctgtcaat
aaaattcgactagaaacagaagaggacgtgaaagaaaaattccctcaggccgagcacttt
gaggtcattgaatccttcaacgtagtgagcaaagaagtcttccggaatttagtgcttaat
gagtacaggaggtgtgatgggagagaattgacggctttaaggaacatttcctgcaacgta
gacctctttaggccacttcatggctctgctctgttccagcgaggacaaacacaggtgctg
tgcagtgtcacatttgattccctggaatccagtgtcaaagcagatattatcaccacagct
ctgagtggcgtcaaagacaaaaacttcatgcttcattatgaattccctccatatgcaacc
aatgaaattggaaaggtgggaggcatcaaccggagagagcttggtcatggggccctggcc
gagaaggctctgagaccaatcattcctaaagacttccctttcactatcagggtcagtgct
gaagtgttagagtcaaacggatcctcgtcaatggcttcagcatgtggaggcagccttgca
ctaatggatgcaggtgtccccatctcctctgctgtggcaggtgtagccgttggcctcatc
tccaaggccaacccagagaaacctagtgacatccaagactacagattactaactgatatt
ctgggaatagaggattacctcggggacatggacttcaaactggcaggaacaaacaagggc
atcactgctttgcaggctgatgtgaagataccaggtttgcctctgaaagtggtcatggag
gctatccaacagggcacagtggcaaagagggaaatcttgggcatcatgaacaaatgtata
gtaaaacccagagaaactaggaaagagaatggacctgttgtcgaaaatgtccgggtgcct
gtttctagacgagctcgctttgttggtccaggaggatataaccttcgcaggctacaagct
caaacaggtgtgacaataagtcaggtggacgaggagactttctctgtgttcgctccatca
ccgggagccatgaacgaagctcaagacttcatcagtgagatctgcaaagatgatcaagaa
cagcagctggagtttggtgcaatctacacagcaaccatcactgaaataagggacattggt
gtgatggtgaaactttatcccaacatgagtgctgtcctgctgcacaactcacagctggac
cacaaacggatcaaacatccaagtgcattgggtttagaggtgggaaagcagatacaggtc
aagtactttggacgggacccaacagacggtagaatgagactttcacgtaaggtgctccaa
tctcctgctgcaactgttgtcaagacactaagtgagaaacagagcatctccatgggttca
agcaacagccaaacgaccggaagtgatttgtga
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integrated database retrieval system
