Seriola lalandi dorsalis (Yellowtail amberjack): 111645336
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Entry
111645336 CDS
T06058
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111645336 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111645336 (tpr)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111645336 (tpr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
CCDC89
Motif
Other DBs
NCBI-GeneID:
111645336
NCBI-ProteinID:
XP_023250267
Ensembl:
ENSSLDG00000004801
LinkDB
All DBs
Position
Unknown
AA seq
2371 aa
AA seq
DB search
MAALLLQEFEGSDLSKLPKTIQNKLEKIFSDQQYEIDSLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEEFLSQTQEHLKLKDEFTKLEEELKTVREKNRQNESAQEKLSSEQTLLSKAKEEL
EAEKRDLVRTLERRSLEVEHLNDDLRQLNDKLVEVSTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLHGQTSWLNGELKAKSEEMLSLSRQKGNEILELKCTLENKEDELNRLQDQV
ASLKTSNDNLQKQNEDMISKLKETKEQQATMEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSRAVEELHKLLKDAGEANKGLEEKVQEMNGATDKTVAELKERIQGLEKELDNANELL
SSSKLRGPVGTTSVLTEEQMTTMSPTAAAVSKIKPGMKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKAPLLKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQRESDEAN
KRSSVLERDNQRCELQLADMAQQVRVLLIELEEARGNHVVHEEEVSSADVSSTSEVISQH
LVTFRSVEELQKQNQRLLVALRELSDAQEKEEFEATGNKHGELVQSLEKAQAELESLKEQ
RSQQVKMTESIVRQRDMYRVLLAQATGVNFPQQGTSPDEFSLTTTPRRSPAATPTTGTPT
ALVSMATESAEALEAKAALRQLQEVFSTYKKERVESDKVLMEQNEKLQEQLSDLRSQNAK
ISTQLEFASKRYEMLQDNVEGYRKEIASLREKEQKMTASTQKHEQTVHTLNEDLRAAKEK
LTMAEGCAESLRKERNMLKLVESRLTQEKETVQSQQQSQKLLLTNLQSIQATLERSETDT
RQRLNSQLEKQEREISQLQKKLENEVEQRHLLSRNQEIQLMEAKRQLEIQVALHQKTKEL
LNAAELELNTHRLHQGSSEARHILSSPTTPNIRGLQGSDQDREDLLGRLRLAETQAEELA
ESLRAATSTMEQYRAMAQSLEESLDKEKQVTEQARASIEAHMKETEEQHRRLEEKLLEAE
KEKQGLEEQRKSALASLEEQINSLQRSLSNSQADHQAALQQVAVAEAQQQQALQDSQEQA
KLAAEAQDKYEREMMLHAADVEALQAAKAQALQAVELRHQLEEKVQRVSTELLEARVSWE
EQEKILKEEMSKMENRHEELQRQNALLHEQIQTMSSKMADNLQRAASESTMNIPLIEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRYRLRVEHLERELKEVQDSLSAARERMQV
TAKTLAQHDELMKKTETMSILMETNKMLREEKDKMEQELQQTQAKVQKLESDIMPLQQAN
SELSEKSGMLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQL
TEESTRLKAEVARTNNLTTSLQTQIQNLRDSMNKITDERNSLKKELDTKNQDLQEKVRTI
TQVKKIGRRYKTQYDELKVEHDKMVAEAAAGPSQEEEARQASVQELQGLRDSLSQAEAKT
KELEGQLENINKVVTERETEVRNAQEQCSRVQTELTRLRQELQDKTSQEDTLRQQMADKE
EKTRKAIVYAKQKINQLMGTKDQLKKENDELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVAPTASKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEG
PPVEHVTVYGSASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSMTHTEPAN
QEPPPVVIEATPSSQVEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESTTMVTDTEAT
QDDNSRAPIPKKLRIIQRVGPEEEVLAEDSAEADGVVPSDSQDGAEPSQTEEFPALEEGE
DSAASQSMTLDQEVTLTQSDTPDQLSQEVIVIITDTESDEDQEEEEEEEEEEQDYDEEEE
EEDEEEEEEEEEDEEEDEGGMGEEGEESNEGSRDGNEAYEEDDTEGADATDPGTETEESL
GASDSTQRPADSQTPSFEGSTMEAFSTEQPITSSGTRMPQSPRRPTHQLPPRLNIHPAPT
SELGPPAQRIPVRRQSVGRVPQLTPGVPVSAQHFFDEDDRMVPSTPTLVVPHRDGFDQAI
HSPQVAGVPRFRFGPSEDMPQTSSTSHSDLGQLASQGGLGMYESPLFLATHEEESGGRSV
PTTPLQVSAPVTVFSEVGQSDATEHASQSVPMVSTSTPGLVVPGAAGTGEERDDVFLEPD
TDRPSAEVSVDPVVSQGDLEEPGQPSDKGSLPSTSQEPSSSSADTSSAPPKPSRPGPSRQ
LQRWPESRGGRMKRGGQAFPSRGIHGRRFAR
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgttgctgcaggagtttgaaggttccgatctatctaaactacctaaaaca
attcaaaacaaactcgagaagattttttccgatcagcagtatgaaatcgattctttgaaa
gcacagcaagaacaatttcgggttgacagcgagcaacatttctttgaaaaagtgaaacaa
cttgcccaatgtcaggaagagtttttgtcccagactcaagaacatcttaagctcaaagat
gagtttaccaagcttgaggaagaacttaaaactgtgcgtgagaaaaacaggcaaaatgag
tctgcccaagagaagctgtcatcagaacagactctactgtcaaaagccaaagaggaactg
gaggcagaaaagcgagatcttgtacgaacactggaaaggagatccttggaagtggagcat
ttaaatgatgacttgaggcaactcaatgataagttggtggaagtcagcacctctaagatg
gccctgcagatgaagttagatgagcttgaagcagctgaagtcaatattaaatacaaggag
aagcgtatggaacaagagaaggagcttttacatggacagacatcttggctgaatggggag
ttgaaggccaagagtgaggagatgctgtctctctcccgacagaagggtaacgagatcctg
gagttgaaatgcaccctggaaaataaagaagatgagttgaaccgactccaagaccaagtg
gccagtttgaagacttcaaatgacaaccttcagaaacagaatgaggacatgatcagcaaa
ctcaaagaaaccaaggaacaacaagccaccatggaagaaaagttcagaaatgagttgaat
gccaacattaagctctccaatttatataagggtgcagcagcagattctgaggcgaaaagt
gaagagctgagtcgggctgtggaggagctacataaactgctgaaggatgctggagaagcc
aacaagggccttgaggagaaggtgcaggagatgaatggtgccacagacaagactgttgct
gaactaaaggagaggatccagggtctagagaaagagctggacaacgccaatgagttgctg
tcaagttctaaactcagaggtcctgttggtacaacatctgtactgacagaggagcaaatg
acaacaatgtctccaacagcagctgctgtatccaagatcaagcctggtatgaagctgact
gagttgtatactgcctatgtggagagccaggagcagctgcagttggagcgcttggagaac
aagcgagtcaacaagtacctggatgacatagtgcaggaagtggaagcaaaagcccccctc
ctcaaacggcaaagggatgagcatgagcgtatgcagaagtcagtggctagtctttctgcc
aaactggagcaggctgtaaaggaggtgcatcgtctgcagagggagtctgatgaggccaac
aagcgctcctctgtcttagaaagggacaatcagaggtgtgaactgcagctggcagacatg
gctcagcaggtgcgtgtgctgctgatcgagctggaagaggctcgtggaaaccatgtggtt
catgaggaggaggtgagctcagccgacgtcagcagcacatcggaggtgatcagccaacat
ttggtgaccttccgcagtgtggaagagcttcagaagcagaaccaacgtcttctggtggcc
ctcagggagctcagtgatgcccaagagaaagaggagtttgaagccaccggcaacaagcat
ggtgagctggtgcagagtttagagaaagcacaggctgagctggagtccctgaaggagcag
cgcagccaacaagtaaaaatgactgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaactggagttaacttccctcagcaaggtacatcacctgatgagttc
tccttgacgaccacccctcgacgctcacctgcagccactcccaccacaggaaccccaact
gctctcgtctccatggcaactgagtctgctgaagcactggaggccaaggcagctttgcga
cagttgcaggaggtgttctctacctacaaaaaagagcgtgtggagagtgacaaggtgctg
atggagcagaatgagaagcttcaggagcagctctctgaccttcgttcccagaatgccaaa
atatccacccagctggagtttgcctccaagaggtatgagatgctgcaggacaacgttgag
ggatacaggaaagagattgcctccctaagagagaaagaacagaagatgacggcttccacg
cagaagcatgagcagactgtccacactttgaatgaggacctgagagctgccaaagagaaa
ctcaccatggctgagggctgcgctgagagtctgcgtaaggagagaaacatgctgaagctg
gtggagtccaggctgactcaggagaaagaaacagtccagagccagcaacagagccagaag
ctgctgttgaccaacctccagagtattcaggccactctggagcgttcagagactgacaca
cgccagcgtctcaacagccagttagagaagcaggagcgggaaatctcccagctgcagaag
aagctggagaacgaagtggaacagcgccacctgctcagcagaaaccaagaaatccagctg
atggaggcaaagaggcaactagagatacaggtggctttacaccagaagaccaaagagctg
ctgaatgctgctgagttggagctcaacacacacaggctgcatcaaggcagcagcgaagca
cgtcatatcctgagttcccccaccacgcccaacatcagaggcctgcagggttcggatcaa
gacagagaggacctactgggtcgtctgaggttggctgaaacccaggccgaggagctggca
gagagcctcagggcagccacctccaccatggagcagtacagagccatggctcagagcctg
gaggaatctctggataaagagaagcaggtaacggagcaggcacgcgcctccatcgaagcc
catatgaaggaaactgaagagcagcaccgcaggctggaagagaagcttctggaagcagag
aaagaaaagcaaggcttagaggagcaaaggaagagcgccctagcctcactggaggagcag
atcaacagtctgcagagaagtttaagcaattcccaggcagatcaccaggcggcgctgcag
caagtggcagtggctgaagcccagcaacagcaggctctacaagacagccaggagcaggct
aagctggcagcagaagcgcaagataagtatgagcgagagatgatgttgcatgcggcagac
gtggaggcgctgcaggctgctaaggctcaggccctgcaggccgtggagctgagacaccag
ctggaggagaaagtccagagggtcagcactgagctactggaggcccgggtctcctgggag
gagcaggaaaagatcctcaaggaggagatgtcaaagatggagaatcgccacgaggagttg
cagaggcagaacgccctcctgcatgagcagatccagacgatgagcagcaagatggctgac
aatttgcagcgtgctgctagtgagagtaccatgaacatccctctgattgaagagggcaaa
tctcaagaccaagtccttgagatcctcagatttgtgcgtcgggagaaggagattgcagaa
tctcgctttgaggttgcccaaggtgagagtttgcgttatcgtctgagggtggagcacctg
gaacgagagctgaaagaggtgcaggacagtttgagtgccgcaagggagaggatgcaggtg
acagcaaagacccttgctcagcatgatgaactgatgaagaagacggaaactatgagtatc
ctgatggagaccaacaagatgctgagagaggagaaggacaagatggagcaggaactgcag
caaacccaagctaaggtgcaaaagctggagtcagacatcatgccactgcagcaagctaac
tctgagctgagtgagaagagtggcatgctgcaggcggagaagaagatactggaggaggag
atcaagcgctggaaggctcggacacagcatttggtgagtcaacagaaagattcagatcca
gaggagtacaagcgtctgcactctgagaaggaggcacatctaaaacgcatccagcagctc
actgaggagagtaccagactcaaagcagaagtggccaggaccaataacctaacaacatcc
ctgcaaacccagatacaaaacttgcgtgacagtatgaataagataactgatgagagaaat
tcgctgaagaaggaattggataccaagaaccaggatctccaggagaaggtgcgaactatc
acccaggtcaagaagattggacgccgctacaaaactcagtatgatgaactcaaggtggaa
catgacaagatggtagctgaggctgcagcaggtccttcccaagaagaggaggctcgtcag
gcttcagttcaggaactccagggcctcagagattctctgagccaggccgaagccaagacc
aaagagctggaaggacagctggagaacataaacaaggtggtcacagagcgtgagactgag
gtgcgtaatgctcaggaacagtgctccagggtgcagacagagctgaccaggctcaggcag
gagttgcaggataagacttcccaggaggatacactgaggcagcagatggccgacaaggag
gagaagaccagaaaagccattgtttatgccaaacagaagatcaaccagctcatgggcacc
aaagaccagctgaagaaggaaaatgatgagctaaagcagcagcgtgaggagctggaggtt
cgagtgagcgctctcaagtctcaatatgagggccgcctgagtcggcaggagagagaactg
agagacctgcgaggtcaacaggagagacaagagcaaagagatgagccacctgaggcaggt
ccaagcaagacacaggagcagcagaggagcacagaacagagacagatcagcctgaagaca
actccagctgcagacaggggcagtgccagcacctctgaacctccaactgccaacattaag
ccaacgcctgtagcccctacagccagtaagcagcctgtcaacccagggaacaaacccact
ccaagagcaagcatcaggcccatgatcaccccggctactgttcccacaccaacgcccaca
gctacggtcatgcccaccacacaggtggagacccaggaagccatgcagtctactgaaggt
ccaccagtggagcatgtgactgtgtacggcagcgccagcggttcagtgcgctccgccagc
cccaatgtccagactactttagctagccccatgttgactgttcagcagacccagacacag
gccacggcatttgttcagccaacgcagcaacagagcatgacccatacagagccagccaac
caggagccaccacctgtggtcatagaggcaacacctagctcacaggtggaatggccttcg
acttcctccacctcctctgtgtttggcactgtttcagcaacaccaggaacctcctcgatg
tccaagaggcctcgagaggaggaggaaagcaccaccatggtcactgacacagaagccacc
caggacgacaactccagagctcctatacccaagaagctgcgcatcatccagagagtgggt
ccagaggaggaagtgctggctgaggacagtgctgaggctgatggtgttgtgccctcagac
agtcaagatggtgcagaaccaagccagacagaggagtttccagcactggaggaaggagaa
gacagtgcagcctcccagtccatgacattggaccaagaggtgaccctgacccaaagtgac
acccctgaccagctgtcgcaggaagtaatcgtcataataacagacacagagagtgacgag
gatcaggaggaggaggaggaggaggaggaagaagagcaggactatgatgaggaggaggaa
gaggaagatgaagaggaggaggaggaagaagaagaagatgaggaggaagacgagggaggg
atgggggaggaaggagaggaaagtaacgaggggagcagagacggcaatgaggcttacgaa
gaagacgacacagagggagctgatgcaacagacccgggcacggagacagaggagagtttg
ggggcgtctgactccacccagaggccagcagattcccagacacccagctttgagggcagc
acgatggaagctttctccacagaacaacctatcacaagctctggtacacgcatgccccag
tcgccacggagaccaacgcatcagctgcccccacgcctgaacatccaccctgctccaaca
tcagaactaggaccacctgctcagcgtatccctgttcgtcggcagtcagtagggagagtc
cctcagctcacacccggggtgccggtcagcgctcagcacttcttcgatgaggatgaccgg
atggttcccagcactcccactctggtagtaccacaccgcgatggttttgaccaggccatc
cattctcctcaagtggctggtgtgcctcgcttccggtttggtccttcagaggacatgcct
cagaccagctccacctcgcactctgacctgggacaactcgcatcacaaggaggtcttgga
atgtatgaaagccccttgttcttagcaactcatgaagaagagtctggaggacgcagcgtt
cccaccacaccactacaagtttcagcgccagtaacagtattctccgaggtgggtcaatct
gacgccactgagcacgcctcccagtcagttcccatggtgagcacgtccacaccgggcctg
gtggtgccaggagcagccggtacaggggaggagagagacgatgtcttcctggagcctgac
actgataggcccagtgctgaagtgtcagtggatccagtggtgtctcagggagatttggaa
gagccaggtcagccctctgacaagggcagcctcccatccaccagccaggagccctcttcc
agctctgcagatacaagcagtgctccgcctaaaccctcgagacctggacccagcaggcag
ctgcagcgctggccagagagccgcgggggccgtatgaagagaggaggtcaagcatttcct
tctcggggtatacacggaagacgctttgcccgatga
DBGET
integrated database retrieval system
