Seriola lalandi dorsalis (Yellowtail amberjack): 111645578
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Entry
111645578 CDS
T06058
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111645578
Transcription factors [BR:
slal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111645578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
111645578
NCBI-ProteinID:
XP_023250588
LinkDB
All DBs
Position
Unknown
AA seq
2529 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGVGDAPEGGEKRDSDENRDRSRSPQNQTSSSSFSSNS
HSESSQADPIRARDTSDREGLSETTVSLVMDSEKLLTSSDDRSGRSAVSSGSHSDSGGSS
CSNSSTPSANNSPNPASSRKTATFKARVPKKKYTSEHCLSNTAGNHSNPASSTPPPLPLS
SGVLNHGSTGSGSDISISHPDGGGQSRSLMDDFQVRTTGREGTQDSSPGPPTLSLGVERE
RPGGGEGVRDAERVSPSPLPRCSSTDTASEHSADLEVVGDTRALTQMSAHAPSSLPDALS
DALAKGLKNQRVLARQLRRRIDEEGGGERRDEGGISDLVFRAGVVRKVSGEYGSLEVQLN
GEKTLCRYPYRHDSPPGVVDIILDAPPPGVHPIPIGTRVCVPFGNEECSEGQWQWYREGV
VTQVDTHPAVANRYRVLLSEERAHSVDEEEDGRGAAGATQAVWVSRQTLRLLVPPWDLDL
PTGGGREGEDGVREKEREREDREEMDVEQEVCRLSRGMAPGVGSVGRGMPYPGMVPVSST
LGHSITSPVTPASVLSLAPGREWEIEKDLERERDLQRKQERERERERERENSVKHQQQQQ
HHPYMPLTPEEDMEVSHFNMVPMGAIIPGAKPMAVPQHRHIVSKPPPGYLSPHLSVVRGI
GIPSAHLALNPHPPPSPVLLGLDPATAAAAAAGAVLTTPQLPPLPPISSSTASSSRVEKA
SGGGSSSGGAGGGGSGSGSTSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWR
RLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRERGGASSTGTLTPSDLRLGGGRAS
SEFDWDETSRESSEASSRGGDSRPRLVLPSLLPQDLSRFDFDECEAATMLVSLGGSRSGT
PSFSPISNQSPFSPTPSPSPSPLFGFRPANFSPITAPASLTPRRHRQLSGTKMGTPGAER
ERHLSGIVPTFQTNLTFTVPMSPSKRKLDTHPPPPLPTVQDYQTKPEQQQLVGVGGGLVG
EPSLGHSPAAFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLP
QEPSPRRIVPLRDSPVIVRNPDVPLAKFSDGPLGRRERSRSREHSQPQHTAPPGLQAPVP
INGATTNGAVLLRNPTSTLVLVTSSSSLTPTTMSHTSLSSPSTPGSMSTSVLSSSGSGGR
ERERKPEGHQDASGGALPQPVACHPTPTALLPLILPAESPHPAPRKQIIMGRPGTVWTNV
EPRSVPVFPWHSLVPFLEPSQSGVAAQPADGQQLVNQSKEPRCGVALVSDGRTGPPDLER
GSPSCPPPTNDNPPTDRGGADSETESDTDDPFSPGVANDPAPSTGPMKRRTQSLSALPKD
GDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYH
DLAFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGTPKEARERSMSESIDPLSESQTVEEKG
GGSGWPGGSERRGGLFIGQQPRPRAFSQSAVHTLEQRERERDLEKEEGASLFRSRPPPQS
LYQGGASEDMTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDGQHGF
QPVARSSLPSSSPSIPPSDSTSSKGNGAGEGGGGGAEDGSERKRKRGTDGGEEGSEGGPK
REETAAGGGEGGGGGGQGVSSLSITGSTSSSQVPLTLAQQGLTQVLGGVRMAPTMVTNVV
RPIASTPIPIASKPVEGAVTLSSHPQDKKATLLIGGGGSQQLPITAGGGYLSSSSSPGPV
SVTPVGGSSLVTSLVLGGSYPAAQPVQLLTPQPPQPHTQAPLPVLQPQLHPTAAISSLTP
PSGSKPLTQVQYILPTENPSSPQLTHQQILSLPANAALANGVHSGAGIRVSPGTRVQTQS
PVLQSKMLVPMATVRTGSTPPHPSISLVAPPLPVQNGPATGNKIIQIAPMPVVQTNVHPS
GAATVHPGSPFPVSMATVMAPGAAPPQTVLLTSPPTRITYVQSGPGVTTATPQQATPAPG
PAYLPSSLATLGFTAIAPGGQTLVQPIVGQSPLLAPAPPLSCQSQTPPGQAAATAGRQVL
TAIYPAPTVGLPTGVVSVTTVPPAVGASAQDVINPSSPLATGLQGSAVVTLQPSVGAEVE
PKVEVKRERDSQLDAQTEDGGQGVSLANCMINSATVKKEEDIIGLYIKEENVRDGHSRDK
RNETDTERERGMRESSEKKRGREADREDHSMGDGCKEAGPRSPLPPPSGLDPPPPPPAER
EPPSSSKKTKFRPPPLKKTPDSLDKVLSETYFEERFAELPEFNPEEVLPSPTLQSLATSP
RAILGSYRKKRRNSTELEVTAEDPSSPRRKTRRLSSCSSEPNTPKSAAKCEGDIFTFDRA
GTEGEDLLGDLDRVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARFSDTFPTK
VCLQLKIREVRQKIMQTATPGALEPGGSAEINPAPSHSSSFNQSAREDGGAEQQGDKGRS
PEGPKSEGS
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcagggccggcgctctcctccttccactcgggccaaaggggga
aagcgtcgtggagtgggggacgccccagagggaggagagaagagagactcagatgagaac
agagacagaagcagatcaccacaaaaccaaacttcctcctcttctttttcctctaattca
cactcagagtcctcccaggccgacccaatcagagcgcgggacacttcagacagggagggg
ctatcagagacgacggtgtcgcttgtgatggattctgagaagttgttgacatcctcggat
gacagatcagggaggtcagctgtgagcagcgggagccacagtgacagcggaggcagcagc
tgtagtaacagcagtacaccgagcgccaacaacagcccgaaccccgcctccagccgaaaa
accgccaccttcaaggcccgtgtccccaagaagaagtacacctctgaacactgcttgtct
aacactgctggtaaccatagcaaccctgcctccagcacgccccctcctcttcctctgagc
agtggggtcctcaaccacgggtcaacaggttcaggaagtgacatcagcatctcacaccct
gatggcggtggtcagagtcggagcctgatggacgacttccaggtcaggactactggcagg
gaggggactcaggacagctccccaggaccccccaccctgtcgctgggagtggagagggaa
aggcctggaggaggggaaggggtgagagacgcagagcgagtgtcgcccagccccctcccc
cgctgctcctcgaccgacaccgccagcgagcactcagctgatctggaggtagttggcgac
acgcgtgccctcacacagatgtctgcacacgcaccatccagtctccctgacgcactgtca
gacgccctcgccaaagggctgaagaatcagcgtgtcctcgcccgccagctcaggaggaga
attgacgaggaaggaggaggcgaaaggagggatgaaggagggatttcagacctggtgttc
cgggctggggtggtccgtaaggtcagcggcgaatatggaagcctggaggtgcaactgaat
ggggagaagacgctgtgtcgttatccgtatcgccatgacagccccccaggggtggtggac
attattctagatgccccgccgcctggtgtccatccaatacctattggcacccgtgtctgt
gtaccgtttggcaatgaggagtgcagcgagggccagtggcagtggtaccgagagggtgtg
gtgactcaggtagacactcaccctgcagtggccaaccgctaccgtgtcctgctgtctgag
gagagggctcactctgtggacgaggaagaagacggcagaggggcagctggtgctactcag
gcggtgtgggtctcccgacaaacactccggcttctggtgccaccttgggatctggatttg
ccgactggaggaggacgagaaggggaagacggggtcagagaaaaggagagggagcgggag
gacagggaggagatggacgttgagcaggaggtgtgtcgtctgagccgggggatggctcca
ggagtgggctcagtggggagagggatgccctacccaggcatggtccctgtttcgtccaca
ttgggccacagtattacctccccagtaactccggcgtcagtcctcagcctggctccaggc
cgagagtgggaaattgagaaagacttggagagggagagagacctccagaggaaacaggaa
agagagagggaacgagagcgagaaagggagaacagtgtaaaacatcagcagcagcagcaa
caccacccgtacatgccacttacccctgaagaagacatggaggtgtcccactttaacatg
gtcccaatgggggcgatcatacctggggccaaaccaatggcagttccccaacaccgccac
atcgtctctaagcccccgcctggctacctcagtccccacctgtctgtggtgcggggcatc
gggatcccctccgcccacttggctttgaacccccatccccctccttcacctgtcctgtta
ggccttgacccagcaaccgcagcagctgcagcagctggtgctgtcctcaccaccccccag
ctccctcctctccctcccatctcatcatccactgcgtcctcctccagagtagagaaggcc
tcaggaggaggttcttccagcggaggagcaggtggcggtggatccggatcaggttcgacc
tcctcctcttcctcacgttcccgcaccccgctgacagctgcccagcagaagtacaagaag
ggagatgtggtgtgtacgccaacaggcatccggaagaagttcaacgggaagcagtggagg
agactgtgctctcgggagggctgctccaaagagtcccagcgccggggatactgctccaga
cacctctcaatgaggaccaaggagatggaggccagtggaggcggccgggagcggggcgga
gccagcagtacagggaccctaacgccctctgacctccgactgggaggtgggagagccagc
tcagagttcgactgggatgagacgtcacgggaaagcagtgaggccagcagccgcggagga
gactcccgtccccgccttgtccttccctctctgctcccccaggacctctctcgtttcgac
tttgatgagtgtgaggcagcaacaatgttggtctccctggggggctcccgctcaggcacg
ccatcattctcccccatctccaaccagtcgcccttctcccccaccccgtcgccttcaccc
tctccactctttggctttcgccctgccaacttcagccccatcactgctcctgcctcactt
acaccacgccgccatcgccagctcagcggcactaagatgggcacaccaggtgctgagcga
gaacgccacctgtcggggattgtgcccacttttcagaccaacctcacttttactgttccc
atgagccccagcaagaggaagctcgacacccacccaccccctccactgccgacagttcag
gactaccagaccaaacctgagcagcaacagcttgtgggtgtaggtggggggttggtggga
gagccatccctgggccacagccctgccgccttcagagtcctctccccccagagtcagccg
acaactccctcctcactctcttttccccggccccgtagcgccaccagcaggccaccatca
tcagccgcttccacgcctccaccaatgctggtctctcccacccctccctcccctctaccc
caggaaccctcaccacggcgcatcgtgcccctccgtgattccccggtcatcgtacgcaac
ccggatgtccccttggccaagttctctgatggcccattaggaaggagagagagaagcagg
tccagggagcacagccagccccaacacactgctccccccggccttcaggcccccgtccct
atcaatggggccaccaccaatggtgcagttcttctgcgcaaccccacatcaacacttgtc
ctggtcacctccagctcgtccttgaccccaaccacgatgagccacacatccctgtccagc
ccctccacccccgggtcgatgtccacctcagtcctgtcctcctctggctctggaggcagg
gagagggagaggaaacctgagggacaccaggacgcctctggaggcgcactgccacagccg
gtagcctgtcacccgacgccgaccgccctgctgccactcatactgccagctgagtcacct
caccctgccccacgcaagcaaatcatcatgggacgcccggggactgtttggaccaacgtg
gagcctcggtcggtgccagtgttcccttggcattcgctcgtccctttcctggagcccagc
caatcaggagtggctgcccagcctgctgatggccaacagcttgtcaatcagagcaaagag
cctcgctgcggcgtggccctggtgagtgacggtcgcactggccctccagacctagaaagg
ggctcgccatcatgccctcccccgaccaatgacaatcctcctacagataggggcggggct
gacagcgagacagagagcgatacagatgacccgttctccccaggtgtggccaacgatcca
gcgccctccactggccccatgaagagacgcacacagtccctcagcgccctgcccaaggac
ggagacaggaagagggagaaggaccacatccgccgtccaatgaacgcattcatgatcttc
agtaaacgccaccgggccctggtgcaccagcgacatcccaaccaggacaaccggacagtc
agcaagatcctgggggagtggtggtacgccctggggcccaatgagaagcagcagtaccac
gatctggccttccaggtgaaggaggcccacttcagagcccatccggactggaagtggtgc
aacaaggaccgcagaaagtcgctgtcagagggccgcgggacgccaaaggaggcgcgagag
aggagcatgtcagagagcatagatcctctgtcagagtcccagacggtggaagagaaggga
ggaggttcgggctggccagggggatcggagcgtcgaggggggctgtttatagggcagcaa
ccccgccccagagccttttcccagagtgccgtgcacactctggagcagagggagagagag
agagacctggagaaggaggagggggcgagtttgtttcgtagccggcccccgcctcagtcc
ctgtaccagggcggggccagcgaggacatgaccagtgatgaagagcgtatggtcatctgt
gaggaagagggggacgatgatgtcatggaagattcatgtccagagggttccatcgacctc
aagtgtaaagagagagtgacggacagtgatgaggacgaaccggatggacagcatggcttc
cagccagtggcccgctcctctctcccctcctcctctccctccatccctccgtctgactcc
acctcatctaaagggaatggagcaggagaaggaggaggcggaggtgctgaagatgggtct
gaaagaaagagaaagagaggcacagacggaggagaggagggcagtgagggaggacccaag
agagaagagacagcagcaggtggaggagaaggaggtggtggaggtgggcagggtgtctcc
tctctgtccatcacaggctcaacatccagctcccaggttcccctcactctggcccagcag
ggtctgacccaggtcctcggcggcgtccgcatggctcccactatggtgaccaacgtggta
cgacccatcgccagcacacccatccccatcgccagcaagccagtggaaggagccgtcacc
ctcagctcacacccccaggacaagaaagccacgctcctgattggaggaggcggatctcag
cagctgccaatcaccgcagggggtgggtacctgtcctcatcctcctctcctggtccagtg
agtgtaaccccggtggggggcagcagcctggtcactagcctagttctgggagggtcctat
cctgctgcccaaccagtgcagctcctcaccccgcaacccccacagccgcacacacaggcc
cccctccccgtcctccagccccagctccaccccactgccgccatctcctctctcacacct
ccctccggctccaagccgctaacgcaggtccagtacatcctgcccaccgagaacccctcc
tcccctcaactcacccaccagcaaatcctctccctgcccgccaatgccgccctggccaat
ggcgtacactcgggggcgggaatcagagtcagccccgggaccagagtccaaacccagtcg
ccggtcttgcagagcaagatgttggttcccatggcaacagtgagaacagggtctactcct
cctcatccttccatttccctggtggctccgcctcttcctgtgcagaacggacctgcaaca
ggaaacaagatcatccagatcgctcccatgcctgtggtccagaccaacgttcaccctagc
ggtgcagcaacagtacatcctgggagcccctttcctgtttccatggcaacggtgatggct
cctggtgctgcgcccccgcagactgttcttctgacctccccacccaccaggatcacttat
gtccagtctggtccaggagttaccacagcgacgccccaacaggccacacccgctccaggc
ccagcgtatctcccatcatctctggccactctgggattcaccgccatcgctccgggcggg
caaaccctggtacagccaattgtcggtcaatcgcctctgctggctccagccccgcccctg
agctgtcaatcacagactccccctggccaggccgcggcgactgctggtcgtcaggtacta
actgccatctaccctgcaccgactgttgggctgcctaccggcgtggtctctgtgacgacc
gtaccgcctgcagtaggagcttcggcccaagacgtcataaacccctcctctccgctggcg
acggggctgcagggttcagcggtagtgacccttcagcccagcgtgggagcggaggtggag
ccgaaggtggaggtgaagagggagagggacagtcagctggatgctcagactgaggatgga
gggcagggggtgtcattggccaactgtatgatcaattctgcaacagtaaaaaaagaggag
gacatcatcggcctttacatcaaagaggaaaatgtgcgagatggacacagcagggacaaa
cgaaatgaaaccgacacagagcgtgagagagggatgagggagagcagtgagaagaagaga
ggcagagaggcagacagagaggaccacagcatgggcgacggctgcaaagaggctggacct
cgttcccctcttccacccccctcaggtttggaccctcctccccctccccctgcagaaaga
gagcccccctcttcctcaaagaagaccaagtttcgacccccaccgctcaaaaagacaccc
gactcacttgacaaggtcttgtctgagacatacttcgaggagcgttttgctgagcttcca
gagtttaatccggaggaggtcctcccctcgcccaccctgcagagtctggccacctcgcca
agagccatcctggggagctaccgcaagaagaggcgcaactccaccgagctggaggtgaca
gcagaggaccccagctccccgaggaggaagactcgacgtctgtccagctgcagttcggag
ccaaacaccccgaagagcgccgctaagtgtgagggagacatcttcaccttcgacagagca
ggcacagaaggagaggatctcctaggagacttggaccgagtcccctactcgtctctgcgc
agaactctggaccagcggcgggctctggtcatgcagctgtttcaggaacatggtttcttt
ccatcagctcaggcgactgctgccttccaggctcgcttctcagacacgttccccaccaag
gtatgtctgcagctaaagatccgcgaggtccggcagaagatcatgcagacggccacgccc
ggagccctcgagcccggggggtcagctgaaatcaaccctgccccatcccacagctcctct
ttcaatcaatcagcccgggaggacggaggggcggagcaacaaggagacaaaggccggagc
ccggaggggccgaaaagtgaaggatcataa
DBGET
integrated database retrieval system
