Seriola lalandi dorsalis (Yellowtail amberjack): 111645586
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Entry
111645586 CDS
T06058
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
slal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111645586 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
111645586 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111645586 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111645586 (gtf2h4)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111645586 (gtf2h4)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111645586 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111645586
NCBI-ProteinID:
XP_023250601
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MLSETELHDVNNAVIFYYRLTSKPGIPRYFKSTLTIMKLRVQLQCKNLHEYLRELSPDIL
DKLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLPQAAVALWVKKDSQKDHDECVSVLA
GLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGRAWADEGSTLGPDRHARDIESLDRY
AMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKSEAGEAPYITSAGFQFLLLDTASQL
WYFTLQYLKTAQLSYTEWRDNVLVSRNTSVFRQQRKSRRYYPTRLAITLAAGVTTSSPSS
SSSSSSSSNLASTPSTGDAGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQ
VTRESVQQAIANGITAQQIIHFLRTRAHSVMHKQTPVLPPTITDQIRLWELERDRLQFTE
GVLYNQFLSQADFEVLRDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQKSHT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcgaaacagaactacatgatgtcaacaatgcagttatattctactatagacta
acttcaaaaccgggaattcctcgatatttcaaatcaaccctcacgataatgaagctgcgt
gtccagctgcagtgtaagaatttgcatgaatacctgagagagctgagtcctgacatactg
gacaaactctacaaccatccagcaacatgtctggctgtctacagggaactcccttctctg
gccaagaattatgtgatgcgtatgctgttcctggatcagcccctgccccaggcagcagtg
gcattgtgggtgaaaaaagacagtcagaaggatcatgatgaatgtgtctcagtgttggcg
ggactccgcctctggcacagtcagcagctgcagggcggcctgcagggatacattttaaac
ccagtgttcaaagacaacctgaggatagccctgctcggcgggggccgggcgtgggccgac
gagggcagcactctgggtcccgaccgccacgcacgggacatcgagagtctcgaccgctac
gccatggagcgctgggaggtcattctgcatttcatggtgggttctcccagtgccgctgtc
agccaggacctggctcagctgctggttcaagcaggcctcatgaaaagtgaggcaggagaa
gcgccctacatcacctcagccggtttccagttcctcctactggacacagcctctcagctg
tggtacttcaccctgcagtacctcaaaactgctcagcttagctacactgaatggagagat
aatgtattagtttcccgtaatacttctgtttttcgtcaacagaggaagtcgaggcggtac
taccccaccaggctggccatcactctggcagcgggggtcaccaccagctccccctcctcc
tcctcctcctcctcatcctcctccaacttggcttccactcctagtactggagatgctggc
ttcattgtggtggaaaccaattatcgcatctatgcctacacaaactcagaacttcagatc
gctctggtggctctcttcagtgaaatgctgtatcgttttcccaacgtggtggttgctcag
gtaacgagggagtcagtgcaacaggccatcgccaacggcatcactgcacagcagattatc
cactttctaaggaccagagctcactccgtcatgcacaaacagaccccagtgctgcctcca
accataaccgatcagatcagactgtgggagctggagagagatcggctgcagttcacagag
ggagtgctctacaaccagttcctctcccaggcggacttcgaggtgctgcgagacagagct
cagggtttgggctgtctggtgtggcaggacgtggctcacagggtgatggtggtgacgccg
cagggacacagcgaggtcaagaggttctggaagcgacagaagtctcacacgtaa
DBGET
integrated database retrieval system
