Seriola lalandi dorsalis (Yellowtail amberjack): 111645607
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Entry
111645607 CDS
T06058
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111645607 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111645607 (sfpq)
03041 Spliceosome [BR:
slal03041
]
111645607 (sfpq)
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111645607 (sfpq)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111645607 (sfpq)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111645607 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Amino_oxidase
Motif
Other DBs
NCBI-GeneID:
111645607
NCBI-ProteinID:
XP_023250628
Ensembl:
ENSSLDG00000018917
UniProt:
A0A3B4Y8H6
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSRFNNNRGGLGMNHFQQRRGGGPGGPMRGGVMGNPNFRNHPFQNQNQNRRGPNNNFNKP
PNQGPQTTPHKPQQTQSLPIIPPPSPGPALTMKGPMQQQQKPVQQQKPTTPVPQPKIQSP
PPKPNMTSPQPNQANKNQNQNQQLKSPVGNANGQQQKQPPHPSPKAGPQQGQKTGPQQGQ
KTGLQQGQKTGFQQGQRTGPGAMKPKEEPEKKAMNTAKPESDEGQAQEGFRATLSMLLKP
GEKTYTQRCRLFIGNLPSDITEEHFKKLFAKYGEPSEVFINKGKGFGFIRLESRALAEIA
KAELDDTPMRGRPLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGMVERAIVIVDDRG
RSTGKGIVEFASKPAARKALDRCNEGVFLLTTSPRPVIVEPLEQFDDEDGLPEKLAQKNP
RYQAEREEPPRFARPGTFEFEYSKRWKSLDEMEKQQRQQVEKNMREAREKLESEMEDAYH
EHQANLLRQDLLRRQEELRRMEELHSQEMQKRKEMQLRQEEERRRREEEMLRKREMEEQM
RRQREENYRMGNFMDRDREMRMGAGGAMGMGDMPFGASNQKFPMGGMGFEGQQGMGPSSG
GLMGNEMRNERFAQGGPRGMGPGNPGYGRVREEFDGPTKKPRF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatttaacaataatcgcggcggacttgggatgaatcatttccagcaacgcaga
ggcggtgggcctggcggcccgatgcggggtggagtaatgggaaacccgaatttcaggaat
catccatttcaaaatcagaaccaaaatcggaggggaccaaataacaacttcaacaaaccg
cctaatcagggaccacagacgactccccataagccacaacagacccagtcgttgcctatc
attcctccaccgagcccaggccccgctctcacgatgaagggcccaatgcagcagcagcag
aaaccggtacagcaacagaaaccgacaactccagtacctcaaccgaagattcagtcccca
ccgccgaaacctaacatgacctcccctcaaccgaatcaggcaaacaagaatcagaaccag
aaccagcaactgaagtcaccggtaggaaacgctaacggacagcagcaaaagcagcctcca
cacccgagcccaaaggccgggccacagcagggccagaagacaggcccccaacaaggccag
aagacaggtcttcaacaaggccagaagacaggcttccaacaaggccagaggacagggcct
ggcgccatgaagcctaaagaggaaccagagaaaaaggccatgaacacagccaaaccagag
tcagacgagggtcaggcacaggaggggtttagagcaacgctgtccatgctgctgaaaccc
ggcgagaagacatacacacagcggtgtcgcctgttcattggtaacctgcccagcgacatc
acagaggagcattttaaaaagctctttgctaaatatggagagcccagtgaagtcttcatc
aacaaaggcaaaggctttggtttcatccgattggagtctcgtgcacttgcagagatagca
aaggcagagctggatgatacgccaatgagaggtagacctctgcgtgtccggttcgccaca
cactctgcagccttgtctgtaaagaacctgtcaccattcgtctccaatgagctcctagaa
gaagctttctcacagtttggaatggtggagagggccattgtcattgtagatgatcgtggg
cgttccacaggcaagggcattgttgagtttgcctccaaacctgcagccagaaaggcccta
gaccgatgcaacgagggcgttttcctgctcaccacgtcaccaaggcctgttattgttgag
cctctggaacagtttgatgatgaagatggtcttccagagaaattggcacagaaaaacccc
agatatcaagcagagcgggaggaacctcctcgcttcgctcgtccaggcacttttgagttt
gagtactctaagcggtggaagtcgctcgacgaaatggagaagcagcagaggcagcaggtg
gagaagaacatgcgggaggcccgtgagaagctagagagtgagatggaggatgcttaccac
gagcaccaggccaatctactccgacaagatttgttgaggcgacaggaggaactgcggcgc
atggaggagctgcacagtcaggaaatgcagaagaggaaggagatgcagctcagacaagag
gaagagcgacgcaggagggaggaggagatgcttcgtaagagggagatggaagaacagatg
cgccgtcagcgtgaggagaactacaggatgggcaacttcatggatagggacagggaaatg
agaatgggtgccggcggagctatgggcatgggagatatgccctttggtgcatccaaccag
aagttccccatgggtggaatgggctttgagggacagcagggaatgggaccatcctcagga
ggcttgatgggcaacgaaatgcgcaatgagcgctttgcccagggtggtcctagggggatg
ggtcctggtaaccccggttatggcagggtccgtgaggagtttgatggtcctactaagaaa
ccccgtttttaa
DBGET
integrated database retrieval system
