Seriola lalandi dorsalis (Yellowtail amberjack): 111645908
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Entry
111645908 CDS
T06058
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111645908 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111645908 (cstf3)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111645908 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
111645908
NCBI-ProteinID:
XP_023251011
Ensembl:
ENSSLDG00000025649
UniProt:
A0A3B4YSR8
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSTEGAADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDPRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAALLPETVVAPSVPTLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAIAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagggagcagccgaccaggcggcagcagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcaca
cagttcccaagttctggcagattctggaaactattcattgaagctgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtgttgcacatcgac
ctgtggaaatgctacctctcatatgttcgagagaccaaagggaagctacccagctacaaa
gagaagatggcccaggcttatgactttgccctggataaaatcggcatggaaataatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagttgaggctgtgggctcatac
gcagagaaccagcgaatcactgcagtacggcgggtgtaccagagaggctgtgtgaacccc
atgatcaacattgagcagctctggagagattatagcaaatatgaagaggggatcaatgtg
cacttggccaaaaagatgattgaggatcgaagcagagactacatgaacgccaggagagtt
gctaaagagtatgagactgtgatgaagggtttggacaggaatgcaccctcagtacccccc
cagaactcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccattgcgcacagaagaccagaccctcatcacaaagagagtcatgtttgcc
tatgagcagtgcctgctggtgcttggccaccatcctgacatatggtatgaggcagcacag
tacctggagcagtccagcaaactgctggcagagaaaggggatatgaataattccaagctg
ttcagtgacgaggcagctaacatctatgaacgtgccattgggactcttctgaagaagaac
atgcttctgtacttttcatttgctgactatgaagaaagccgcatgaagtacgagaaggtc
cacagcatctataataaactgttggccattgaagacattgaccccacgctggtctacatc
cagtacatgaagtttgccaggagggcggagggcatcaaatcaggtcgcaccatcttcaaa
aaggcccgggaggatccacgcacacgccaccatgtttacgtgactgcagcactgatggag
tactactgcagcaaggataaatcggtggcttttaagattttcgagcttggtttgaagaaa
tatggtgacattccagagtacatactggcatacattgattacctctcacatcttaatgag
gataacaacaccagggttctgtttgaacgtgtcctcacctcaggaagcctgtcaccagaa
aagtcaggtgagatctgggctcggttcctggcgtttgagagcaacataggagacctggct
agtattctgaaagtagagcgcaggcgtttcactgccttcaaggatgagtatgagggcaaa
gaaacggctttgctcgtagacagatacaagttcatggacctgtatccctgctctaccagt
gaactcaaggcccttggatacaaggatgtgtctcgtgccaaactggcagcactacttcca
gagactgtggtggcgccctctgtgcctacactgaaggatgaagctgaccgtaaacctgag
taccccaaacctgacaccaatcagatgatccccttccagccacgtcaccttgcccctcca
ggtttacaccctgtccctggtggagttttcccagtccctccagctgctgttgttctaatg
aagctgctccctccgcctacatgctttactggcccctttgttcaagtggatgagctcatg
gaaacttttaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggcagacagcccgatgcaggaggggagggcaatggatccatggagaaccatgctattgcc
aagtcactcaagaggcctaatgcagactccgatgaggaggatgacaaaggagctgtggct
ccgcccatacatgacatctaccgagcacgccaacagaagaggattcgataa
DBGET
integrated database retrieval system
