Seriola lalandi dorsalis (Yellowtail amberjack): 111646115
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Entry
111646115 CDS
T06058
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111646115
03036 Chromosome and associated proteins [BR:
slal03036
]
111646115
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111646115
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111646115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111646115
NCBI-ProteinID:
XP_023251297
LinkDB
All DBs
Position
Unknown
AA seq
2147 aa
AA seq
DB search
MEDKKRKKDDKRKREASQKVTEQKNKVPDLTKPASTQPPATQSSSASPSPGPTPSASPSP
ATSGPGSAATPSQGGNNAKRLAVANGQPTSTTSSSSTAGGPSAAGNSSASSGGGAQASQQ
QPRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGGDGPNANMAAVSDSGAAASS
LALTSSSVAASTTTSNYANSMWGASSGSQTSSQGREKVIVDGNDLEEWPSIAGSDGGGAS
FTRAGGGSSNNGMPVNSNSASGNQSSPTSSFSLPNECMQSSNGVAWGTAASQGHLGGGNA
VAAAGPLLQQPSSLSKASAVPGSHDASGPVDGSSGIPGANFNPNANPSAWPALVQQDGPA
AAGEGGPSSFHHQGPGGSLSANNSASLGLGGGAVGVLGGHPPLSVNQSSTHQHQLHQMQS
RDREMGGGKWDSESAGPKIAGGEGIGGGMDHGVGGGGMSVGDHSLASSWRGQPSYPAANS
KTGASRTDGWEGGGGGGTGGFGAAEGDNGTSGWGYPSSTSGANAWGSAGTGGNGSQTSGV
SQGGWGSSGVGSERGVSGGDWGGSTTGIGGANPGGEGMGGACSSNSSSSGGSTAGNPPAT
SSSSSTATTMTRVWDNQKGESETGEWGGGVGGQGARGGSSSSGGNSRNGSGPNSSQSRPR
RQAPNAEAALQNLLNRSDLDPRVLSNTGWGQTQIRQNTAWDVDEHGGQSKGGLPSASASK
HPSSLGGSSQYSGGPRTQITESAGPGVNPSLVASAGSSGEGWESSSNSSSSGASLSGRAP
PPSGPNMRNLGISQSGPVTTTGPGMGSGVIPGHNQQVKATGWGGEGMGSGDGQEAKGWGN
EEWRDSSRGGKGGGWGDLGKQGDQVSGGWGGNQEEKGAGGWKDMGGNGGGSGWGSGQKVG
AGRDWGEQESKSNSGGGGWEDDRKNGGGNSGGDSGVGGWGSWDDNAPRRTWGAGGTGGGG
SGGGGMGVVGGMGSKPHQNWSGGNKMHQMPNSQLGSITGPQAQLQQQQSQPRNQHPQLQQ
ALDQGAMQGGGGRKPISQAQNQNQSSGWTSGPIPGGPGGSGSGSEPSGWEEPSPQSISRK
NEIDDGTSAWGDPTHYNYKPVNLWDKNSAPTGQQPHVQGQAQQQHQQQQQQQQQQQQQQQ
QQQGPPIQQQPSRQAAGLGGNRDFNTGHGPGKVSAMGPSGWGGTPPTSPTVDNGTAAWGK
PSDAPTGWGEPDNAGGKTTGWGNPSTNPIKSGSKSMQDGWGDKDGSVAASRHSSWEDEEE
AGGMWNSAGSQGSGSSWGQGSNGGWGQSHTVKKPNNKGPLKAGGGDSWMNPINRQFSNMG
LLNDDPSGPNIDLAPGSLQEKKMEAEKRGMGMNDYNGDMRKGGRGGGGGGMAYRPPGSKE
AAPVDPGSYYDKTLPLTNQDGCLGDEGPCSLYSPPTVYKPHSLFNHTIPFRQGGHSIFGS
GGGMGQSRHQPNVPPINQSPGIRGQVPHQFLSPQVPGSVLKQMPPPSGSVGGVGGVGGVA
GVGGGVFPPQLSPQHIAMLSSIYPPHIQFQLACQLLLQQQQQQPQQQQQQLLQNQRKFTP
NVRQQADPQQLARIMAVLQQQRQQQQVGGLGGSSKLSPSHHGGGGIGGPKLPGTDPLPHP
GLAGSVADLHQKTLGPYSGFSSGVNLPGLDLGGSVLGGPGGMKDLGVQQSRFKWMMEGHS
SPDTSSPENPFHKNGPVTPIKMPGGSPYSQYDMMVGDGLGDSWHRTPGKMVTKPTPTPSW
PPEFQPGVPWKGIDRVDPESDPYMTPGSMMGNAVSSNLNDTEHQLLQDNTDSTPPLNTLL
PSPGAWPYSASDSPLNNAHNSAKYTDYKTSWPPEPIGHKSWKASRGSSQSQLSRPPPGLA
SQKQPSPSPWSGGPPRLAGRGWGGGSSSTGSTWSDSSSRESCWLVLSNLTPQIDGSTLRT
ICMQHGPLLTFHLGLTQGTALIRYGSKQEAAKAQSALHMCVLGNTTILAEFVSEEDVARY
IAHSQAGGAGSGGSTAGSAGSGPTASSAVGANSNGGNCERGGAGGSSGGGGVDGGSTAGG
AGSGGAGPSSSGWQSLDSTGSSSDQSATQGPGLGIFSQWSSNGTGVGGAGGVEAGRQGLW
GGMGGMSGAGYPSSSLWGSPALDDRHQMGSPASLLPGDLLGGGADSI
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaagacgacaaaaggaaaagggaagcctctcagaaggtt
acagaacaaaaaaacaaagtgccagacttgaccaagccggcgtctacccagcctcctgcc
acacagagcagctctgcctcccccagccctggacccaccccctctgcctccccatcccca
gccacctcaggccctggcagtgctgccaccccgtcacagggcggcaacaatgccaagcgc
ctggcggtggccaacggacagcccacctccaccaccagttcttcctccaccgctggcggc
cccagtgctgctggaaacagcagtgcaagtagcggaggcggagcccaggcgtctcagcag
caaccacgctacatgccgagagaagtgccgccgcgattccgctgccagcaggaccataaa
gtgctactgaagaggggtcagccgccactgtcctccatgctgctgggagggggaggagga
ggggatggcccaaatgcaaacatggctgctgtctcagattctggtgcggctgcctcctca
ttggccctcacctcatcatcagttgctgcttctactactacttctaattatgcaaattcc
atgtggggggcgagctcaggcagccagacctcctctcagggcagggagaaggtgattgtt
gatggcaacgacctggaggagtggcctagcatcgctggcagtgatgggggaggagcttca
ttcaccagggctggggggggcagcagcaacaatggaatgcctgtgaacagcaacagtgcc
tctggcaaccaatcctcacccacttcctcgttctctttgcccaatgaatgtatgcagtcg
tccaatggtgtggcatgggggacggctgcctcccagggtcatcttggaggagggaatgca
gtagctgcagctgggcctctgctacaacagccctcctcactttccaaagcctccgctgtg
ccagggagccatgatgccagtggccccgtcgacggcagcagtgggattccaggtgccaac
ttcaatccaaatgccaacccttcggcctggcctgccctggtgcagcaggatgggcctgct
gctgcaggggaaggaggtccgtcttccttccatcaccagggccctggagggtctttgtct
gccaacaactctgcttccctggggctaggaggtggggcagtcggggtgctggggggtcac
ccacctttatctgtgaatcaatcaagcacccatcagcaccaacttcaccaaatgcaatcc
agagacagagagatgggaggggggaagtgggacagcgaatcagcgggaccaaaaatcgca
gggggggaagggattgggggaggaatggaccatggtgtgggaggaggcggaatgagtgtg
ggagaccacagtcttgcctcctcatggagaggccagccttcttaccctgcagctaactcc
aaaacgggtgcctcaaggactgatggatgggagggcggaggaggaggtggcacaggtgga
ttcggagctgctgaaggggataatgggacctcgggttggggttatccgagttccactagt
ggggcaaatgcttggggcagtgctggaactgggggaaacggtagtcaaacctctggggta
tctcagggagggtgggggtcatcaggagtaggatcggagagaggagtttctggtggtgat
tggggtggaagcaccactggtattggaggagctaatccaggaggagagggaatgggtgga
gcctgcagcagtaacagcagcagtagtgggggcagcacagctggcaacccacctgccacc
tcctcatcttcctcaacagccaccactatgaccagagtctgggacaatcagaagggagaa
agtgaaactggggagtggggcgggggagtcggaggacagggagcacgaggaggatcttca
tccagcggtggaaattccagaaacgggagcggacctaacagcagtcaaagtcgtcctcgc
cgccaggcacctaacgctgaagctgccttacagaacctgctaaaccggtctgatctggac
ccacgggtcctgtcaaacacaggctggggccaaacacagatccgacaaaacacggcctgg
gatgttgatgaacatggaggacagagtaaaggtggattgccatcagcttcagcatcaaag
cacccatcatctcttggtggttcgtctcagtattctggtggacccaggacccaaatcact
gaatcagcgggtccaggggtcaatccttccctggttgcatctgctgggtcctccggagag
ggctgggagagcagcagcaacagtagcagtagtggggcctctctgtctgggagagcccca
ccaccttcaggccccaacatgaggaatcttggcatctcacaatctggaccagtgaccaca
acaggaccgggtatggggtcaggggtaataccaggacacaaccagcaggtgaaggctaca
ggctggggtggagaagggatggggtctggggatggccaggaagccaagggttgggggaat
gaggaatggagagacagtagtagaggaggaaaaggaggaggatggggtgatcttgggaaa
cagggtgaccaagtgagtggaggctggggaggaaatcaggaggagaaaggggcagggggt
tggaaagacatgggtgggaatggaggaggaagtgggtggggatcaggacaaaaggttggg
gcaggtagggactggggagagcaagagtccaaatcaaatagcggaggagggggatgggag
gatgacaggaagaatggaggtggaaactcaggtggggattcaggtgtgggtggttgggga
agctgggatgataatgctccccgtagaacctggggagcagggggcacagggggaggaggg
agcggaggaggggggatgggagttgttgggggaatggggtccaaaccccatcaaaattgg
agtggaggaaacaaaatgcaccagatgccaaacagccaattgggctccatcacaggcccg
caggcacaactgcaacagcaacaatcacagccccgcaatcagcatccacagctgcagcaa
gcgttggaccaaggggctatgcaagggggcggggggagaaaacccatctctcaagcccag
aatcagaaccaaagctcaggctggacctcggggcccatccctggcggccccggaggaagt
ggaagtggatctgaaccgagcggctgggaggaaccctcgccgcagtctataagcaggaag
aatgagatagacgatggaacatcagcgtggggagacccaacccattacaactacaagcca
gtcaacttgtgggataagaacagcgcccctactggccagcagccacatgttcagggtcag
gcccagcagcagcatcagcagcagcagcagcagcagcaacaacaacaacagcagcagcag
cagcagcagggacctccaatacagcagcagcccagcaggcaggctgcagggctcggaggt
aacagagatttcaacactggccacggaccagggaaagtttcagctatgggtccgtcaggt
tggggtggtactcctccaactagtcctacagtagacaatggcacagcagcttggggaaag
cctagtgatgcccctactggctggggagagcctgacaatgctggagggaagacgacaggc
tggggaaacccttctaccaaccccatcaaatctggttcaaagtctatgcaagatggctgg
ggggacaaagacggctctgtggcagcctcgcgtcactcgagctgggaggatgaggaggag
gcaggtggcatgtggaacagcgccggctcccagggaagcggctcgtcttggggacaggga
agcaacgggggttggggtcagagccacaccgtgaagaagcccaacaacaagggtccactg
aaggctggcggaggagactcttggatgaaccccatcaacagacagttctccaacatgggt
ctgctgaatgatgatcccagtggtccgaacattgacctggctccaggatctctccaggaa
aagaagatggaagcagagaaaagaggcatgggaatgaatgattacaacggagacatgagg
aagggaggaagaggaggaggaggaggcgggatggcttatcgtccacctggttccaaagag
gcagcacctgtggaccctgggtcctactatgacaagaccttgcctttgaccaatcaggat
gggtgccttggggatgagggtccttgctctctctactcaccacccactgtctacaagccc
cattccctcttcaaccacactatcccttttagacaaggcggtcacagtatctttggcagt
ggtggagggatgggtcagtcgagacaccagccaaatgtcccacccataaaccagtccccg
gggatacgagggcaagtgcctcatcagttcctgtcaccccaggtgccaggctctgtgctg
aagcagatgccccctcccagtgggagtgtggggggtgttggcggcgtgggaggagtggca
ggagttgggggaggtgtgttccctccacagctgtccccccagcatattgccatgctcagc
agcatctacccacctcacattcagtttcaactggcttgtcagctcctcctccagcagcag
cagcagcagccacagcagcagcaacagcagctactgcaaaaccagaggaaattcacacca
aatgtgcggcagcaggctgacccccaacagttggcccggatcatggcagtgctccagcag
cagaggcagcagcagcaggtcgggggtttaggcggcagctccaaactctccccctcccac
catggtggaggtggcatagggggtcctaaactgcctgggactgatcccctgccccatcca
ggcctagcaggatctgtggctgacctgcaccagaaaactctcggaccatactctgggttt
agttctggagtgaaccttcccggtctggacctgggtggttctgtgttgggggggcccggg
ggcatgaaggacctaggagttcagcagtcccgcttcaagtggatgatggagggacactcc
tctccagacacatcctcccctgagaacccattccataaaaatggtcccgtcacccccata
aagatgccaggaggctcgccctactctcagtacgacatgatggttggagacgggctgggt
gacagctggcatcgcacccctggaaagatggttaccaagcccactcccacgccaagctgg
ccccctgagttccagcctggtgttccctggaagggaattgaccgcgttgaccctgaatct
gacccctacatgaccccaggaagcatgatgggaaatgcagtgtcctccaacctcaatgat
actgagcaccagttgttacaagacaatacagattccacccctcccctcaacaccttgctg
ccttcacctggtgcctggccctacagtgcctcagacagtcccctcaacaacgcacacaac
tcagcaaagtacacagactacaagaccagctggcccccagagcccatcggacacaagtcc
tggaaagccagccgtggcagcagccagtcccagctgtcccgcccacctccaggactagcc
agtcaaaagcagccatcaccttccccttggtcaggaggaccccctcggttagctggaagg
ggctggggcggtggctccagcagcactggctcgacctggagtgacagcagctctcgggaa
agctgctggttggtgctcagcaacctcacaccacagatcgatggctctacactgaggacc
atctgcatgcagcacggccccctgctgacctttcaccttggcctgacccagggcacagct
ctgattcgctatggctccaaacaggaggcagccaaagcccagagtgcactccacatgtgt
gttctgggtaacaccaccatcttggcggagtttgtgagcgaggaggatgtggctcgctac
attgcacattcccaggctggaggagcaggaagcggaggatccacagccggctctgcaggc
tccgggcctacagcgtcctccgcggtgggggctaacagtaacggaggaaactgtgagaga
ggtggagcaggagggagcagcggtggaggaggagtggatggaggatccacagctggagga
gcaggaagtggaggagctgggccttccagctccgggtggcagagtctggacagcacaggc
agctcatcggaccagtccgccacccaggggcccgggctgggcatcttcagccagtggagc
agcaatgggaccggggtgggtggtgctggaggcgtggaagccggaaggcagggcctgtgg
gggggaatgggtgggatgagcggggcggggtaccccagcagtagcctctggggttcccca
gcactggacgatcgtcaccagatgggcagccccgcctcactgctgccaggggacctgctg
ggcgggggggccgactccatctaa
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integrated database retrieval system
