Seriola lalandi dorsalis (Yellowtail amberjack): 111646186
Help
Entry
111646186 CDS
T06058
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111646186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111646186
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111646186
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111646186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
zf-C3HC4_4
zf-C3HC4
FN3_DSCAM-DSCAML_C
PRY
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
111646186
NCBI-ProteinID:
XP_023251384
Ensembl:
ENSSLDG00000012623
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCTTNESIQSISAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLPAPHSGPNSPSEEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LRQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQ
IIGSKIKEGKTQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLETLDYLTAPSAPSIREELCTASYDT
ITVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QDRFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGILLDYDAGYLTFYDAVGSQHLHTFHVSFIQPVC
PVFNVWNKCLTVLTGLPIPDHLEGLEPVT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagaccca
cttctgctcccctgtgcccacagcctttgcttcggctgcgcccaccgcatccttgtctcc
cactgcaccaccaacgaatctattcagagcatcagcgcctttcagtgccccacctgtaga
tatgtcatttctctgagtccagagcgtggattagaaggacttaagagaaacgtgaccttg
cagaacattatcgatagagttcagcgggcctcatcttcagctgggctccctctaccactg
ccgctgcctgcgccccacagtgggcccaactctcccagcgaggaagggagcaaccggttg
gcgctggtccctgttagcgccgccatgtctagcccaggcacacctcctgaaccggtccag
tgccagttctgtgagcaggaccccccacaggatgctgtcaagacatgcgtgacatgcgag
gtgtcttactgcgaggaatgccttagagcgacacaccctaacaagaagccgttcaccggc
caccggctcattgagcccatgcctgactcccaccttagagggctccagtgtctggagcac
gacgaggagaaggtaaacatgtactgtgtcactgatgatcagctgatctgctcgctgtgc
aaactggttggaaggcacagggaccaccaggtggcagcactgagtgaccgctatgaaaaa
ctcaggcaagccctggactccaacctgagtaatttgatcaagaggaacaatgagctggag
tcacttatggggaaactgatccagacttgtcaacatgtagaggtgaacgcgtcccgccag
gagggcaagctcatggaggagtgcgatctcctgattgacattattcagcagaggaggcag
atcattggcagcaagatcaaggaggggaagacacaaaggcttcggaagctcgcccaacaa
atctccaactgcaagcagtgcatcgagaggtcctcggccctcatcacacaggccgatcag
acgctgaaagaaaccgatcatgctcgcttcctgcagaccgccaagagcatcaacgagagg
gtgtccatggcaaccgcatcaacccaagtgctgatccctgagatacacctaacagacacc
ttcgacaccttcgccctggacttcaccagagagaagaagctgctggagactctggattac
ctcactgctccaagtgctccgtccataagggaagagttgtgcactgcttcctacgacact
atcacagtccactggacatctgatgatgaattcacagtggtgtcctatgagctccagtat
gccatcttcactggacagtccaacattgccagtctctgtaactcattggagagctggatg
attgttcccaacatcaagcagaaccactacacggtgcacggcctgcagagcggcaccaag
tatatctttgttgtcaaggccattaaccaagcgggaagtaggagcagtgaaccaggaact
ttgaagaccaacagccagccattcaagctggacccaaaatcagctcacaagaagctgaaa
gtgtctcacgataacctaacagtggagcgggatgaaaccacatccaagaaaggccatagc
caggatcggttctccagccagagcagctatggcgtggtgggaaatgtctatattgacagt
gggcgtcactattgggaggctctgattggaggtagcacatggtacgctgtgggtatagcc
tacaaatcagcccccaagcatgagtggattggcaagaactcggcctcctgggtgctttgc
cgctgcaacaactcttgggtagttcgccacaacagcaaggagctggctattgagccatca
ccccacctgcgacgcgttgggatcctgttggactacgacgccggatacctgaccttctat
gatgctgtgggctcccagcacctgcacacatttcacgtctcctttatccagcccgtgtgt
cctgtgtttaacgtgtggaataagtgtttgacggttctcactggtctacccatcccagac
catctagagggactggaacccgtaacctga
DBGET
integrated database retrieval system
