Seriola lalandi dorsalis (Yellowtail amberjack): 111646327
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Entry
111646327 CDS
T06058
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
slal04137
Mitophagy - animal
slal04144
Endocytosis
slal04340
Hedgehog signaling pathway
slal04350
TGF-beta signaling pathway
slal04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111646327 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111646327 (smurf1)
04350 TGF-beta signaling pathway
111646327 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111646327 (smurf1)
04137 Mitophagy - animal
111646327 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
111646327 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111646327 (smurf1)
04121 Ubiquitin system [BR:
slal04121
]
111646327 (smurf1)
03029 Mitochondrial biogenesis [BR:
slal03029
]
111646327 (smurf1)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111646327 (smurf1)
Membrane trafficking [BR:
slal04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111646327 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
111646327 (smurf1)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
HECT type E3
111646327 (smurf1)
Mitochondrial biogenesis [BR:
slal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111646327 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
111646327
NCBI-ProteinID:
XP_023251571
Ensembl:
ENSSLDG00000019820
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDSTGA
AGGGNCRLDSPSQESRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPQMDVGGEEGGGGGVGSGGGGGGDGDVAARYERDLVHKLKL
LRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVA
REWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGH
YINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGK
FLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFD
HKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGS
TRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKL
LTAVEETCGFAVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaagtt
gtggtggatggatcgggtcaatgccactcgacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagtata
tggaaccacaaaaagatccataaacgacagggggccggattcctgggctgcatacgactt
ctttccaatgctatcagcaggctaaaagacacaggataccagcgtctagatctctgtaag
ctcaacccgtcggacagcgacgcagtgcgggggcagattgtagtgagcttgcagacacga
gaccgcattggcagcggagggcctgtggtggactgcagaggactgttggaaaacgatggg
cccgtgttcgagggatgtttcagtgaagagccgctgccgtactccgactccactggtgcg
gcagggggcgggaactgccggcttgactcgcccagtcaggagagccgtcttcaaacccag
cgaatcagagggcaggactccagaggccatggccacacccctcagaacagacctcacggg
caccaaccgcctgacctaccagagggatacgagcagcgaacaacagtgcagggccaggtg
tacttcctccacacacagacaggcgtcagcacctggcacgacccccggataccgcgggac
ctggccagcgtgagctgcgaggagcttgggccgttgccggtgggctgggaggtccggagc
accgtgtccggccggatctactttgtggaccacaataaccgaaccacacagttcacagac
ccacgcttacacacgattatcagccagcaatcccaagcaaaggaatcctcccaagccccc
cagatggatgtggggggtgaggaggggggaggcggaggggtgggcagcggcggaggcgga
ggaggagacggggatgtggcagcgcgctacgagcgagacctggtccataagttgaagctg
ctccggcacgagctgtcgctgcagcagccgcaggcgggacactgtcgcatcgaggtctcc
cgggaggagatcttcgaggagtcgtatcggcagatcatgaagatgaggcccaaagacctg
aagaagcgtctgatggtgaagttcaggggagaggagggtctggactacggcggggtggcc
agggagtggctgtacctgctgtgtcatgaaatgttgaacccctattacggcctgttccag
tactccacagacaacatctacacactacagatcaaccccgactcctccatcaaccccgac
cacctgtcgtatttccactttgtgggtcgtgtgatgggcctcgcggttttccacggtcac
tacatcaacgggagcttcacgctgcccttctacaaacagctgttaggcaaacccatccag
ctcaacgacctggagaccaccgacccggagctgcacaagagcctcgtctggatactagag
aacgacatcacttcagtcctcgaccacacgttctgcgtggagcacaacgcctttggaaag
tttttacagcatgaactcaaacctaacggccgtaatatccccgtcactgaggagaacaag
aaagaatacgtgagactttatgtgaactggaggtttatgagaggaattgaagcccagttt
ctggctctgcagaagggattcagtgagctcatcccccagcacctcctcaaaccttttgac
cataaagaacttgagttgatcatcggcggactggggaagatcgaccttgcagactggaag
acaaacacccgcctgaagcattgcacaagtgaaagcaacgtggtgcggtggttctggcag
gcggtggaggccttcagcgaggaaaggagaggacgcctgctgcagtttgtcacaggctcc
accagggtcccactacagggtttcaaggcgctgcagggctctacaggttctgcaggacca
aggctctttaccatccatttgatagacgccaacacagacaacctgcccaaggctcacaca
tgtttcaacaggatagacatccctccctacgagtcttacgagaaactttatgagaaactg
ctgacggctgtggaggagacctgcggcttcgctgtggagtga
DBGET
integrated database retrieval system
