Seriola lalandi dorsalis (Yellowtail amberjack): 111646340
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Entry
111646340 CDS
T06058
Symbol
papolb
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111646340 (papolb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111646340 (papolb)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
111646340 (papolb)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
111646340 (papolb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
111646340
NCBI-ProteinID:
XP_023251587
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSRPVKSHAPPWPDTPRCYGITGPISEDLPHEADLIQTRKLIDSLKSYGVFEDDLELQHR
EKVVRRLELLYKEWLKEMCFALNIPESVTENVGGKVFPFGSYYMGAHSKGADIDALCVGP
GFLERKDFFTSFYEKLRAQQEVKHIRVIEDAFVPVIKLSYDGIEIDLVFGRVARKSIPEN
LDLLDDKLLQNMDEHCVRSLNGYRVTEEIMRLVPNIFNFRLALRAVKLWAKRRNIYSNKL
GFLGGISWAVLVARVCQVYPNATVSTLVIKFFKVYSMWVWPVPVRLRVVENRCYDLPFWD
PMVNLNDRCHIMPIITPAYPQQNTSFNVSPSTSSIITAEIERGFAVAQEIQQEEANWSKL
FEKPNFFENYQHYVLLRASSASEKQHREWVGTVESKIRLLVGILERNVHVSLAHVHLQPF
HGPGKDNNKEGVITTWMIGLSLVFNTDGSKNQKIDLTPDLLSFTETIYSQAESCRTYEEG
MTVSATYGSRENLSWEMPNGDRKRLFSPKPSHQLSATALPRHAPPAGRGQPGVKREGRPQ
SETPAKRAKADEVLPNRTTLC
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacccgtgaagagccacgctccgccatggccagacacacccaggtgttatggg
atcactggtccgatcagtgaggatctgccccacgaggctgatttgatccagaccagaaaa
ctgatcgacagtctgaagtcatacggtgtgttcgaggacgacttggagctgcagcacaga
gagaaggttgtgaggaggctggagcttctctataaggagtggctcaaagaaatgtgtttt
gcattgaacatacctgaatcagtcactgaaaatgtcggaggcaaagtctttccatttggc
tcctattatatgggagctcactccaaaggtgctgacattgacgctctttgtgtcggacct
ggatttctggagaggaaggacttcttcacgtccttctacgagaagctgcgagcccagcag
gaggtcaaacacatacgggtcattgaagacgcatttgtccccgtcatcaaactgtcctat
gatgggattgagattgacctcgtcttcggccgcgtggcgaggaagagcatccctgaaaac
ctcgaccttctggacgacaagctgttgcagaacatggatgaacactgtgtcagaagcctc
aatggctacagggtcacagaagaaatcatgcgtcttgtgccaaacatttttaacttcagg
ctggcgctgagagccgtcaagctgtgggccaaacgccgtaacatctactccaacaagctg
ggcttcttgggcgggatatcctgggccgtactggtggccagagtttgtcaggtgtacccc
aacgctacagtttccaccctggtgatcaaattcttcaaggtctactccatgtgggtgtgg
cccgtcccggtccgcctgagggtcgtggagaaccgctgctacgaccttcctttctgggat
cccatggttaatctgaacgaccgctgccacatcatgcccatcatcaccccggcgtacccg
cagcagaacacgtccttcaacgtgtctccgtccacctcgtccatcatcacagcggagatc
gagcgcggcttcgccgtcgctcaggaaatacagcaggaggaagcgaactggtccaaactc
tttgaaaagccaaacttttttgagaattaccagcattacgttctgctgcgagcgagttcg
gcctcggagaagcagcatcgtgagtgggtcggcactgtcgagtcaaagatcagactcctg
gtgggaatcctggagagaaatgtccatgtttctctggctcatgttcatctacagcctttc
catggacccgggaaggacaacaacaaagagggagtgatcacaacctggatgatcggactt
tctttggtctttaatacagacgggtctaaaaaccagaaaatagacctgacccccgacctc
ctttccttcactgaaactatctacagccaggcagagagctgcaggacgtatgaagagggg
atgaccgtctccgccacgtacggcagcagggagaacctcagctgggagatgccaaacggc
gaccgcaaaaggcttttcagtccaaaaccgagccaccaactctccgccacagcgctgcct
cgtcacgctccacctgccggccgtggccagccgggcgtgaagagagaaggccggcctcag
tctgagacgccggccaagagagcgaaagctgacgaggttctgccaaaccgcaccacgctt
tgttga
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