Seriola lalandi dorsalis (Yellowtail amberjack): 111646499
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Entry
111646499 CDS
T06058
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
slal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111646499 (syvn1)
04120 Ubiquitin mediated proteolysis
111646499 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111646499 (syvn1)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111646499 (syvn1)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111646499 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FMN_bind
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
111646499
NCBI-ProteinID:
XP_023251777
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHMRVLSLMGLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPPVPPQAAAAAAPGATDAPQSSTEATQAAGTSQP
TSSTADTSTAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSRMSE
EELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASGT
NHTASSSAAGSSSETPSQEKDSASFDQVSGATVSSQPADSTSAASDTERKEMMDDGVVED
EDGEPNAAELRRRRLRKLESATSSSSSSPPPDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgactgccaccagtctggcactgactggggctgtggtggca
catgcttacttcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagtatggcggtgttgtacattcaggcctttgtgctggtgtttctgctgggaaagttc
atgaggaaggtcttttttggacagctaagggctgcagaaatggagcacctcattgagcgc
tcctggtacgcggtgactgagacgtgcctggcattcactgtgttcagggatgacttctcc
cctcgctttgtcgccctcttcaccctcctgctctttcttaagtgcttccactggctagct
gaggaccgggtggactttatggaacggagtcctaacatatcctgggtttttcacatgaga
gtattgtctctcatgggactactgggtgtcctggacttcctgtttgtcaaccatgcttgt
cacagcatcattaccagaggagcctcggtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacaaccttcatcaagtacatcctgcacactgttgacctgcag
agtgagaatccctgggacaacaaggccgtctatatgctctatactgagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggtccacaccttc
cccctgtttgccattcgccccatgtatctggctatgagacaattcaagaaagctgtaaca
gatgctataatgtctcggagagccatccgcaacatgaatacactataccctgatgcaact
cctgaagatctgcaggcttctgacaacgtttgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagaggcagcagacctgtcctacctgtcgcatggacgtcctccgagcttctaataacaat
cagactcctgccccagcccaggctccgccccctgctccagcagcccctgccaacgccccc
gcagccccgcctgctaacgtggctccaggcatgttaccaggctttcctcctggcatcttc
cccttctggggtcccttccctccagtgcctcctcaagctgcagcagctgcagctcctggt
gctactgatgcaccacagagcagcacagaagctacgcaggcagcgggtaccagccaaccc
acatcgtctactgcagacacctctacagcagcagctgctccaggatcagcaatcccaggc
ttccctttctccttccctcctcctcccttccccactgcaccatggctgcccatgccgcca
cctcctccctttgtgtcgtcgatgcctccccctcctccgtctctctcccggatgtccgag
gaggagctgagggagctggaggcagaaggtcggcggggcctcgaggccagactccagtgt
ctccaaaacatccacaccctgctggacgccgccatgctcaacatccaccactacctcagc
actgtcgccacactcacccctcctcgggccgagggcagcactggagaagctagtgggaca
aaccacactgcttcatcctctgcagctggcagcagctcagagacccccagccaggagaag
gactctgccagctttgatcaagtgagtggtgcaacagtctcctctcagcccgctgactcc
acctctgctgcctcagacacagaaagaaaagaaatgatggatgatggagttgtggaggac
gaggacggagaaccaaatgccgctgagctgaggcgccgtcgccttcgtaagctggaatcg
gcaacatcatcatcgtcatcatcaccccctccagacaactga
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