Seriola lalandi dorsalis (Yellowtail amberjack): 111646619
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Entry
111646619 CDS
T06058
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111646619 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111646619 (rbm22)
Spliceosome [BR:
slal03041
]
Complex B
Other components
Prp19-related factors
111646619 (rbm22)
Complex C
111646619 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
111646619
NCBI-ProteinID:
XP_023251921
Ensembl:
ENSSLDG00000003804
UniProt:
A0A3B4WJP4
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLAIKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPAMDEEAPANYFNLDPSTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGPMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtccctgggatcaaacacgtacaatagacagaactgggaagacgcggatttt
ccaattctgtgccagacatgtttaggagaaaatccttacatccgtatgacaaaggagaaa
tatgggaaagaatgcaagatctgtgctcgacccttcactgtgttccgatggtgtccaggg
acacgaatgcgtttcaagaagacggaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgtctgctcgacctggagtatggtttgcctatccaggtcagagacactggg
cttgctatcaaagatgaggttccgaagtcagatgtgaacaaagagtactacacacagaac
atggagagagagatagccaattctgatggcacacggccggtgggccagctaggtaaagcc
cccagctctagtgatatgttgctgaagctggcccgtacaacgccatattacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaagagtgtccc
tacaggcatgagaagcccacagatcctgatgatcctctagctgaccagaacataaaggac
cgttactatggtatcaatgacccagtagctgacaagctgttgaagcgggcctcaactatg
ccacgactggacccaccagaggataagtccatcaccaccctctacatagggggtttggga
gatactgtcacagatggagatctcaagagtcacttttaccagtttggtgagattcgcacc
attaccatagtccagaggcagcagtgtgccttcatccagtttgccacgcggcaggcagca
gaaatggctgctgagaagtccttcaacaaactgatcattaatggacgcaggctcactgtc
aagtgggggaggtctcaggcagcaagaggaaaggagggcatcaaagatggtgtcagtgag
atgggtaccagacttgatcctgtacctggactgcctggagctcttcctccaccaccagct
atggatgaagaggctcctgcaaactacttcaacctggaccccagcacctcccctgctgtc
atgaacattgctctgcccccacctccaggcattaacccacctcctccaggtttcggccct
ccaatgtttcaccccatgggtcccatggctcctcccatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggaccctcagcgcatgggtgcccatgctgca
catggctcacgccatggtgattag
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integrated database retrieval system
