Seriola lalandi dorsalis (Yellowtail amberjack): 111647173
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Entry
111647173 CDS
T06058
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111647173
09122 Translation
03013 Nucleocytoplasmic transport
111647173
03015 mRNA surveillance pathway
111647173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111647173
03041 Spliceosome [BR:
slal03041
]
111647173
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111647173
Spliceosome [BR:
slal03041
]
Complex C
Other components
EJC/TREX
111647173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP
RXYLT1_N
Motif
Other DBs
NCBI-GeneID:
111647173
NCBI-ProteinID:
XP_023252552
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAQQEEEADESPAVPEEDEEHSEDN
DSSSYVPDKQHCAIPSQPALTRAEERGGTSVVGHGMMAYSADMGPGPTLHCQESPEAPGA
RMQRAIGHKEPPAPSPPRAVASLSVRVLGKPDRQGVPPAVPRAQEKEGTAPSEPGSAHPV
LHLSRSAGVSAGGNVHKDSDEDDGDDESEDDEDWGPGPGTAHRGNRVPPQPQQMPPSVPS
AGGRSKRKLQPPQHIPPPQSPPDPDDQEGNGPEPARGPRGASFQPPTMQGQDSDSSSRSS
SPEPPVKSRRGPLSLLAHKMESEGAFRAVEPMSSAGMSGDAAHSTAGSSSESPLQRLERK
RQQENREMEEERQLKEEKERERRKSQELEREKKRLEEEKEKERKRQEEKEKQRQKEEQEK
ERKRQEDEKEKERKRQDDEKRREEKRLKEEQDKRQQTAIKDKVVVTEAQDSGSSSDSDSK
SDSSSRSSQSSSSSRDKPCPARQLKKVDQGQEAEEEKKTNLGKGAEKRFLSKRPVSF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatgggaaacctctacaatcgctccgagttgcggat
ttgaaagccgctctggagcagagaaaccttccaaaaagcggccagaaaaacacactcatc
aagcgactgaaaggggctctgatgctggaaaacctacagaagtcatcttcctcccacagt
gggctgcagcccaactctcagataggggaggagatgtgccagaacagcttcataaaacag
tacctggccaagcagcaggagctccttcgccagagacttgagagagaggcccagcaagag
gaagaggctgatgaaagcccagcagtgccagaggaggacgaagagcactcggaggacaat
gacagctcttcctatgtccctgacaagcagcattgcgctataccctctcagcccgcactg
accagggcagaggagagaggaggaacttcagtggtgggtcatgggatgatggcatacagt
gctgacatgggccccggtcctaccctccactgccaggagtcccctgaggctccaggagct
aggatgcagcgagccataggacataaggagccaccagccccctctcctccccgcgctgta
gcctccctgtcagtgcgtgtcctgggtaagcctgaccgccagggtgtgccccctgccgtg
ccccgagcccaggagaaggagggcaccgcaccgagtgagccgggatcagctcatcctgtc
ctccaccttagcagatctgctggggtatcagcaggaggcaatgtccataaggatagtgac
gaagatgacggtgatgatgagagtgaggatgatgaggattgggggcctggtcctggcaca
gcacaccggggcaacagagtccctccccagccgcagcagatgccccccagtgtcccatcg
gcaggtggacgatccaaacgcaagcttcaaccgccgcagcacatcccaccaccacagagc
ccaccagacccagacgaccaggagggaaatggccctgagcctgcacgcggtccaagggga
gcgtcgttccaacctcccaccatgcaagggcaagactctgactcgagctctcgttccagc
agtcctgagccccctgtgaagagcaggcgaggaccgctttctctgcttgcacacaagatg
gagtccgagggggctttccgtgcagtggagcccatgtcatctgcgggaatgtcaggagat
gcagcacactctactgctgggtcttccagtgaatctccgctgcaaagactggagagaaag
aggcaacaagagaacagagagatggaggaagagaggcagctgaaggaggagaaggaaaga
gaaagacgaaaatcacaagaactggagagagagaagaaacgcttggaagaagagaaggaa
aaggagagaaaacgacaggaagagaaggagaaacagcgtcagaaagaggagcaagaaaag
gagagaaaacgtcaggaagacgaaaaagaaaaagagagaaaacgtcaggatgacgagaag
agaagagaggagaaacggcttaaggaggagcaggacaagaggcagcagacagccatcaaa
gacaaggtggttgtgactgaggcacaagattcaggttcctcatcagattctgactccaaa
tcagactcctcttcacgctcatcacaatcatcctcctcctctcgggacaaaccttgccct
gccaggcagctgaagaaggtagaccaaggacaagaggcagaggaagagaaaaagactaac
ctgggtaaaggggcagagaaacgattcctctcaaaaaggcctgtatccttttga
DBGET
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