Seriola lalandi dorsalis (Yellowtail amberjack): 111647511
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Entry
111647511 CDS
T06058
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
slal01001
]
111647511 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
slal04054
]
111647511 (ciita)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111647511 (ciita)
Protein kinases [BR:
slal01001
]
Serine/threonine kinases: Other
TAF1 family
111647511 (ciita)
Pattern recognition receptors [BR:
slal04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111647511 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
AAA_16
LRR_8
AAA_22
nSTAND3
AAA
NPHP3_N
nSTAND_NTPase5
TsaE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111647511
NCBI-ProteinID:
XP_023252891
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MHEVDQDQFITLELGDLPDDLSEFMKDDYLPLIDTDVLFGDVWLNGEDSNNFSDVALPTE
LPCTGSHQQRQKNKVTGKTNSGRKRKRATTILKSTRAQRRTDENTPSKPKKRRPADKPQR
TDEQHEPAVTQSTGTGLEQSPAEAAGLTTTPPRILHLHPPIQFIFPDSGYVQTLRLSPPV
IGLPLLLPLLVPAASTPCKRQVHPPSPVDDAVAPVQMSSSPPGSMSDTASKAMPPLCNSP
GSPSNEMSPCKEPPLPQSPTVLDIPQVVQDYIQEVKAHMSQICQDMEEGLTLSSHYVDMQ
VSRREILRSGKSANKCLDKELIIMGDTDRQKSLLRQSQIFEGSNGDKSKHCILLLGNAGM
GKTTLIRKLCLDWSIDCIPQFDFVFLLDGKALTLTKPTFSLQTLLLNLSSFAPSCMDPEA
VYAQILAAPKRVLIVFDGFDQLRDYESLLQTQEKDLIASLQKDSKAQTYTVRQLYSAILQ
RVLLPGCTLLLATRPRGTASQLLRRADSFLEVCGFSPTDVETYLSQYFTDPALRASALDW
LKNCTYLHLLCWNPGLCRLVCLVLEQSKSLEDLPRTLTGLCHQVLRLKMDKDNRSTHSQA
EDPTQISLQAEDPTQISLQAEDPAQISLQAEEETQTQISSNIQTKRCHKNTQKRSRAQVR
TRSRTQRTMRAKEKEEEENEVDGEEMNSGGREADRTEERELLSQLSSLAWEGVKANSSIL
PTGRTLSDKLKAFGLRMRLFLSHPLRTRLVVLSGEGEEGGTQDKGNRGGTETNNFDASDD
HIVLWADPFLQSYLAGVHLSLSRTLSDRNFLQTLPFQSGPKGRRRPQREELELTQRFTVG
LLFHKRTELQRLHSNTETSFRNMVVNKQALVTKHLEGLSHGDLSPAQVLEACHYVYEASF
THSNGSGGTGSARLVTQLAAILPEVLTFHGVPLNPPDVFTLQNVLERGGTEGRSFCLDLE
DSGIQVSGLRALVGLKSINTYRACIADVITLWEQLEQSGEEGLLRGAVSKLNIHPLKATQ
VCHVEHLAKLVNIHMHKRLSDSCSQSDSILAEGVPAVKELHKLEFELGPEKGPLGLPKLW
ELLPGLQNLQHLDLENSKIGDKGAEKLVDALASLCSLEILNLSQNCIGDNGVKKLASTLS
DLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTELDVKYNKLTDVGAQSLGASLRKCQK
IKTLRMWNQCIPYGVFERLQQQDSRILWH
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtagatcaggaccaatttatcaccttagagctcggagatctgccagacgat
ttatctgaattcatgaaagatgattacctgccgttgatcgacacagatgtgctcttcggc
gatgtgtggttgaatggagaggactccaacaacttcagtgatgttgctctgccaacagag
ctgccgtgcacaggcagccaccagcagagacaaaagaacaaagtaacgggcaaaacaaac
agtgggagaaaaagaaagagagctacgacgatcctcaagtctacccgggcacagcggcgc
actgacgagaacacaccatccaaaccaaagaaacgaagacctgcagataaaccgcaaagg
acagatgaacagcatgagccagctgtcactcagagcactggcacaggattagagcaaagt
cctgctgaagcagcaggccttaccaccactccaccaaggatccttcacctccatcccccc
attcagtttatcttcccagattcaggatatgttcagactctgaggctctctcctccagtt
attggtcttccactcctgcttccattattagttcctgctgcctcaacgccctgcaaacgc
caagtgcacccaccctccccggtggacgatgcagtagccccagtccaaatgagttcatcg
ccaccgggatccatgtcagacactgctagcaaagccatgcctcccctttgtaactcacct
ggctcccccagtaatgagatgtccccatgtaaagaaccacctctacctcagtcccccact
gtccttgatattccacaggttgtccaggactacattcaggaagtcaaagcccacatgagc
caaatttgccaggatatggaggagggccttaccctcagctctcattatgtagatatgcaa
gtgagccggagagagattcttcgctctggaaaaagtgcaaacaaatgcctggacaaggag
ctcatcatcatgggagatacagatcggcaaaaaagcttgttgaggcagagtcagatcttc
gaaggctcaaatggtgataaatccaaacactgcatattgctacttggaaatgcgggcatg
ggaaaaacaaccctgatcaggaagctgtgtcttgactggtccatagactgcatcccacag
tttgactttgtcttcttattagacggcaaagcgctcactttaaccaagccgacctttagc
cttcagaccctcctgttaaacctctcttcttttgccccttcctgcatggaccccgaggca
gtgtacgctcaaatccttgcagccccgaagcgtgtgctcattgtttttgatgggtttgat
cagttgcgggactacgaaagtctactccagactcaagaaaaagacttgatagcatcgttg
cagaaagacagtaaagcacagacctacacagtaagacagttatactctgccatccttcag
agggtgcttcttccaggatgcacgcttctcctcgctacacggccaagaggcaccgccagc
cagcttctgcggcgggcagacagctttctggaggtatgtggcttttctcccacagatgta
gagacatatttgtcccagtacttcaccgatcctgccctcagagcgtctgctttggactgg
ttaaaaaactgcacttatctacatctcctctgctggaaccctggactatgtcggctggtg
tgcttggttttggagcagtccaaaagtttggaggacctaccgagaactttaaccgggctt
tgccatcaagtgcttcgtttgaaaatggacaaggacaataggagcacacattcgcaggct
gaagatccaacacaaatatctttgcaggctgaagatccaacacaaatatctttgcaggct
gaagatccagcacaaatatctttgcaggctgaagaagaaacccagacacaaatctcaagt
aatattcaaacaaaaaggtgtcacaaaaatactcagaagaggtccagagcacaggttcgc
actcgctctcgtacccaaagaacaatgagggcaaaagagaaggaggaggaggaaaatgaa
gtggatggagaggagatgaacagtggtggaagggaggcagataggacagaggagagagag
ttgctgtcccagctgagctctttggcctgggagggggtcaaagccaactcgtccatcctt
cccacaggacgaaccttatctgacaaactcaaagctttcggcctcagaatgaggctcttc
ctctctcaccccctgaggacaagactggttgtgttaagtggtgaaggggaagaaggagga
acacaggacaagggaaacagaggtgggacggaaacgaacaactttgatgccagtgatgat
cacattgtgttgtgggccgaccctttccttcagagttacttggcaggtgtccatctgtct
ttgtcgaggactttgtcagaccgaaatttcctccagactctccctttccagtcaggcccg
aagggacgtcggcgacctcaacgagaggagctcgagctcactcaacgatttacagtcggt
ctccttttccacaaaagaacagagctgcagaggcttcactcaaacacagagacatccttt
agaaacatggtggtcaacaagcaggctttagttacaaaacaccttgaaggtctttctcat
ggtgacctgagtccagcccaggtcctggaggcatgtcactatgtttatgaagcgagtttc
acgcacagcaatggaagcggaggcactggcagcgcacgattggtcacgcagctggcggcg
attctcccagaagtcctgacatttcatggagttccactcaacccaccggatgtgttcacc
ctgcagaatgttctggaaaggggtggaactgaagggagaagtttctgcttggatctggag
gattctgggatacaggtttctggactgagagcactggtggggctcaagagcatcaacaca
tacagggcatgcattgctgatgttatcaccctgtgggagcagctggagcagagtggtgag
gaggggctcctacgaggggcggtgtcaaagttaaatatccaccctctgaaagccacgcag
gtctgtcatgtggagcacctggcaaagctggtgaacatacatatgcacaagaggctgtcg
gacagttgcagccaatcagattccatcctggcagagggagtgccagcagtcaaagagcta
cacaagctggagtttgagcttggtccagagaaaggtccactgggtcttcccaaactgtgg
gagctcctgccaggtctacagaaccttcagcacctagatctagagaacagtaagataggg
gacaaaggcgcagagaagctggttgatgcgttagcctcactctgttccctggagattctc
aatctgtcacagaattgtatcggagacaacggggtgaagaaactggcatccacgctgagt
gatctgcccaagctgcactgtttgagtctctacagtaatgtgatttctgacgaaggggcc
gagagtttagcagccgtcctcccacacatggcgtctctcacagagctggatgtgaagtat
aacaagctgacggatgtcggagcccagagccttggagccagtctgagaaaatgtcaaaag
ataaagactttaaggatgtggaaccagtgtattccatacggagtgtttgagcgtcttcag
cagcaggacagtcggatcctttggcattag
DBGET
integrated database retrieval system
