Seriola lalandi dorsalis (Yellowtail amberjack): 111647589
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Entry
111647589 CDS
T06058
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111647589 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111647589 (cpsf4)
03019 Messenger RNA biogenesis [BR:
slal03019
]
111647589 (cpsf4)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111647589 (cpsf4)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111647589 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
111647589
NCBI-ProteinID:
XP_023252979
Ensembl:
ENSSLDG00000019078
UniProt:
A0A3B4Y8U8
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MQDLLANVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGSAVCEFFMRAACLKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPQQTQNQTKPVPTIGRSSLSLIQLTNSSSGQRPQNNMVPGAIQQNNMSANRGPRPLDQV
TCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacctactggccaacgtggaccacatcaagttcgacctggagatcgccgtggag
cagcagctaggagctcagccgctgccatttcccggcatggacaaatccggctctgctgtg
tgtgagttcttcatgagagcagcttgtctgaaaggcggcatgtgtccgttccgtcacatc
agtggggagaagacggtggtgtgtaagcactggctccgaggactgtgtaagaagggagac
cagtgcgagtttctccatgaatacgacatgaccaagatgcctgaatgctacttctactcc
aagtttggtgagtgtagcaacaaggaatgtccattcttgcacattgatccagagtccaag
atcaaagactgtccctggtacgacagaggcttctgcaaacacggtcccgactgcagacac
agacacacaagaagggtgatctgtgtgaactacctggtgggcttctgtccagagggaaaa
tcctgtaaattcatgcaccctcgttttgagttgcccatgggagcgtctgaacagcctcct
ctgccacagcaaacccagaaccagacaaagcctgtgccgaccatcggccgctcgtcgctc
tctctaatccagctgaccaactccagttcaggccagcggccgcagaacaacatggtgccg
ggggccattcagcaaaataacatgtccgccaacagagggcctcgtccactggaccaggtc
acctgctacaagtgtggcgagaaaggccactatgccaacaaatgcactaaaggccacctt
gccttcctgagcggacagtaa
DBGET
integrated database retrieval system
