Seriola lalandi dorsalis (Yellowtail amberjack): 111647591
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Entry
111647591 CDS
T06058
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal00260
Glycine, serine and threonine metabolism
slal00630
Glyoxylate and dicarboxylate metabolism
slal00670
One carbon pool by folate
slal01100
Metabolic pathways
slal01200
Carbon metabolism
slal01230
Biosynthesis of amino acids
slal01240
Biosynthesis of cofactors
slal04981
Folate transport and metabolism
Module
slal_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
111647591 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
111647591 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
111647591 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
111647591 (shmt1)
Enzymes [BR:
slal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
111647591 (shmt1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
111647591
NCBI-ProteinID:
XP_023252982
Ensembl:
ENSSLDG00000019048
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSVTNGHSVSKDTWDAHNKMMLEPLVINDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEVYELDSEKWGVNVQPYSGS
PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENAKLFHPKLIIAGTSCYSRNLDYARLKQIANENGAYLMGDMAHISGLVAADVV
PTPFEYCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETMYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQIQVLANCKALSSALIDHDYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLMEDDFRKVA
EFIHRGIQLALEVQRSLDPKATLKEFIQALSQGEKFQQRVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaacaaacggccacagtgtgagcaaagacacatgggacgctcacaacaagatg
atgctggagcctctggtcatcaacgactctgaggtgttttccatcataaaaaaagagaag
cacaggcagacgtacggtctggagctgatagcgtcagaaaactttgccagcagagctgtt
ctcgaggctctgggttcctgtatgaacaacaagtactcggagggatatcctggacagagg
tactacggtgggacagagcatgttgatgagctggagagactctgtcagaagagggcgctg
gaggtctatgagctggactcagagaaatggggtgtgaacgtgcagccatactcaggttcg
cctgctaacttcgccgtctatacggccattgtggagccccacggcaggatcatgggactg
gaccttcctgatggaggtcacctgacgcacggcttcatgactgagaagaagaaaatctca
gcgacatccatcttctttgagtcgatgccgtacaaggtgaatccagagaccggctacatt
gactatgacagactgcaagaaaatgcaaaactgttccaccccaaactcatcattgcagga
acaagctgctattcccgcaaccttgactacgcccgcttgaagcagatcgctaatgagaac
ggtgcatatctgatgggagacatggctcacatcagtggtttggtggctgctgacgtggtg
ccgacaccgtttgagtactgtgacattgtttccacgacaacgcacaagacgctgcgtggc
tgccgcgctggacttatcttctacaggaaaggtgtgcggagtgtggacgccaaggggaaa
gagacgatgtacaacttggagtctttgatcaatcaggctgtgtttcctgggctgcaggga
ggaccacacaaccacgctattgcaggtgttgctgtcgctctcaaacaagccatgacaccg
gagttcaaggcctaccagattcaggttcttgctaactgcaaagctctgtccagtgccctt
attgaccacgactacaagatcgtcactggcggctctgacaaccatctgatcctgctggac
ctgcgcagcaagggaactgacggaggacgagctgagaaggttctggaagcctgtgccatt
gcttgcaataagaacacctgtccaggggataagagtgctttgcgccctagtggtctaagg
tttggttctccagctctgacctccagaggcttgatggaggatgacttcaggaaggtggcg
gagttcattcacagaggtattcagctggccttggaggtgcagaggagcctggatcctaag
gccactctgaaggagttcattcaggcgctgtcacagggagagaagttccagcagcgagtg
gcggagatcagggctgaggtggaggctttcgccggccagttccccatgcctggcctacct
gagctgtaa
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