Seriola lalandi dorsalis (Yellowtail amberjack): 111647712
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Entry
111647712 CDS
T06058
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04150
mTOR signaling pathway
slal04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111647712 (lrp5)
04150 mTOR signaling pathway
111647712 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111647712 (lrp5)
Membrane trafficking [BR:
slal04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111647712 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
Insulin_TMD
EGF
Motif
Other DBs
NCBI-GeneID:
111647712
NCBI-ProteinID:
XP_023253124
Ensembl:
ENSSLDG00000002497
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MGLKRRRLEMGGLLAVLLLRSCLLSVVHGSPLLLFANRRDVRLVDAEGVRGESAIVVSDL
EDAAAVDFLYAEGLIFWTDVSEEAIKQTHWNQSSNSLKEALGTGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWMDLDQPRAVALNPAQRYMYWTDWGEEPR
IERAGMDGSNRKVIVNADIYWPNGLTIDLVEQKLYWADAKLSFIHKANLDGSARETVVEG
TLTHPFALTLSEETLYWTDWQTRSIHACNKHSGDKAREILSGIYSPMDIQVLEPYRQPYI
QTPCSDNNGGCSHLCLLSPVQPFYSCACPTGVQLKPDGKTCKPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVDDIRHAIAIDYDPVEGYVYWTDDEVRAIRRSHIDGSNAMILVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLDPVNGYMYW
TDWGEHPKIERANLDGTDRVVLLNSSLGWPNGLAIDYAAGKLYWGDAKTDKIEVINVDGS
NRQTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKATAVREIIIDQLPDLMGLKATK
VTETNGTNGCALENGGCSHLCFWRRQAVSCACPMGMELLSDLQTCVVPEAFLLFTNRDNI
RSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEF
GLDYPEGMAVDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLDNPRSLALD
PANGYMYWTEWGGRPRIARAYMDGSTIMTLVDKVGRANGLTIDYVDHRLYWTDLDTCMIE
STNMQGLQRELIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLEL
MLDILVFHSSRQDGTNECSHNNGNCAHLCLATPAGAQCRCASHYTLNPDGRNCSSPSSFL
LFSQKASISRMVLGEQSPDIILPIHVLRNVRAVSYDPLDRLVYWLDGRQNIRRARDDGAM
SMIVSSTVQPVDNQLHDLSLDPYSRHIYWTCETTNTINVQRMDGHTVGVVLKDDTDKPRA
IVVNAEKGYMYFTTVQERSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDA
DLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIERVDKLTGDGRTRI
QGRISYLTSIHAVEEMDPQEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDLL
RCGEPPTCSTEQFTCSTGEIDCIPMAWRCDGFSECEDGSDEENCPVCSAFQFQCDKGGCI
DAQRRCNGEPDCADNSDEQDCETICPPNQFRCGDNQCITKKQQCDNYSDCPDGSDELACE
YVSPPSSGIPNTGPNTIGPVIAIILLVFVIGGAYFVCQRVVCRRYKGPSGTFPHEYISGT
PHVPLNFIAPSSSQHGTFQGISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSST
KGAFYPQILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYHPVRGAAPPTTPCSTDVC
DSDYTPHHLPAGLASSAGRWKATGHGSHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAEE
SCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaaagcgcagaagacttgaaatgggcggtctgctggcggtgttgctgctgagg
agttgcctgctgtcggtggttcacggctcgcctctcctcctctttgccaaccggcgtgac
gtacgattggtagatgcggagggtgtgcggggtgagtcggccattgttgttagtgacctc
gaggatgcagcagcggtggacttcctgtacgcagagggccttatattttggacagatgtc
agtgaggaggccatcaaacagacccactggaatcagtcatccaactcccttaaagaggca
ctgggaaccggccagactgtggtagtatcaggactggacagtcctgatggactggcctgt
gactggctgggtaggaagctatactggacagactcagagaccaatcggattgaagtggcc
aacctagatggcacatctaggaaggtcctgttttggatggacttggaccagcccagggct
gttgctctcaaccctgctcaacggtacatgtactggacggactggggagaggagcccagg
atagagcgtgctggcatggatggcagcaacaggaaggtgatagtgaatgcagacatttac
tggcccaatggtctgaccatagacctggtggaacagaagctgtactgggcagatgctaaa
ctcagcttcattcacaaagctaacctggatggatcagcacgtgaaacagtggtggagggc
accctcacccatcccttcgccctgacgctgtctgaggagaccttgtactggactgactgg
cagacccgctccatccacgcctgcaacaaacacagtggagacaaagccagagaaatcctc
agcgggatttactctcccatggatatccaggtcctggagccctaccgacagccttacatc
cagactccctgtagtgacaataatggaggctgcagtcatctctgcctcctctctccagtc
cagcctttctacagctgtgcctgccccactggtgtccagctcaaaccagatggaaagaca
tgcaagccaggagcggagcaggttctgttgctggcccgacggactgatctgcgcagaatc
tccctggacctgccagacttcaccgacatcgtcctgcaggtcgatgacattcgccatgcc
attgccatagactatgacccggtcgagggttatgtctattggacagatgatgaggttcgg
gccatccggcgctcccacatcgatggcagcaatgccatgatactggttaccacggagatc
aaccaccctgacggcattgctgtggactgggtggccagaaacctgtactggactgacact
ggcactgaccggattgaggtcaccaggctgaacggaacctctcggaagattctgatttct
gagaacctggatgaacccagagccattgtcctcgaccctgttaacggctacatgtactgg
actgactggggtgagcatcctaagatcgagcgggccaacctggatggaacggaccgggtg
gtgctactcaacagctctctgggctggcccaacggactggcaatagattatgcagcagga
aaactctactggggagacgctaagacggacaagatagaggtgatcaacgtggacggcagt
aacagacagactctgctggaggacaagctgcctcatattttcggcttcactttgctgggt
gattacatctactggactgactggcaaagacgcagcatcgagagggtccacaaagccacg
gctgtacgggagatcatcattgaccagctgccagatttaatggggctgaaggccacaaaa
gtgacagagacaaacggtaccaacggctgtgcgctggagaacggcggatgcagccatctg
tgtttctggcgccggcaggctgtcagctgtgcctgtcccatggggatggagctgctctca
gacctgcagacctgcgtggtgccagaggccttcctgctcttcaccaacagggacaacatc
aggagcatctctctgggcaccaacagcaacgacgtggccatccctctgacaggagtgaaa
gaggcttcagctctggactttgatgtctctgagaggagaatctattggacagatatccag
gccaagacaatcagcagagcgtatatgaacggcagctcagttgaacatgtcatagagttc
ggactggactacccagaaggtatggcggtcgactggatgggtcgtaacatctattgggcc
gatacaggtactaaccgcattgaggtggcccggctggatggccagtaccggcaggtcctg
gtctgcaaggatctcgacaacccacgctcgctggacaacccacgctcgctagcactggat
ccagctaatggctacatgtactggacagagtgggggggtcgtcctcgtatagccagagct
tacatggatggcagcaccatcatgaccctggtggacaaagtgggccgggccaacggactg
accattgactacgtagaccatcgcctctactggactgacctggacacatgcatgatcgaa
agcaccaacatgcaaggccttcagagggagctcatcgtggacgacctccctcaccccttc
ggtctgactcagtacagagactttatctactggacagactttaacctgcgcagcattgag
cgagcagacaaacgcagtggactcaaccgcacagtggtgctgcagggccagctggagctg
atgctggacatcttggtgttccactcctcccgtcaggacggtaccaacgaatgctcccac
aataatggcaactgcgcccacctctgcctggccacgcctgccggagcccagtgccgctgc
gcctctcactacaccttgaaccctgatggacgaaactgtagctctccctccagcttcctg
ctcttcagtcaaaaggccagtatcagcaggatggttttgggggagcagagtcctgacatc
atcctgcccatccacgtcctgaggaacgtccgagctgtcagctacgaccccctggaccgg
ctggtctactggctggacggacgtcagaacatacgcagggccagagacgacggagccatg
tccatgatagtgagcagtactgttcagccagtggacaaccagcttcatgacctgagcctg
gacccctacagccgccacatttactggacctgtgagaccaccaacaccatcaacgtccaa
aggatggacggacacaccgtgggcgtggtcctgaaggacgacactgataagcccagagcc
atcgtggtcaacgctgagaaagggtacatgtatttcaccacggtgcaggagcgctcagcc
aagatcgaaggagccagtctggacgggacagagagagagtctctgttcaccacaggtctg
atcagaccagttgctctggctctggacaataaactgggaaaactgttctgggttgatgcc
gacctcaaacgcatcgagagcagtgacctgacaggcgccaatcgcattgtcctccaggat
tccaacatcctccagccaatggggctgacagtcctgggagatcacctgtactggatcgac
cggcagcagcagatgatagagagggtggacaaactgaccggagacggacgcacacgcatt
cagggtcggatatcatacctgacctccatccatgctgtggaggagatggacccacaggag
ttcgcatcccacccttgttcccgtgacaacggcggctgttcccatatctgcattgctaag
ggtgacggtacacctcgctgctcctgtcccatgcacctggtgttactgcaggacctgctg
cgctgtggagagcctcccacctgctccacagagcagttcacctgctccacgggggagatc
gactgtattccgatggcgtggcgctgtgacggcttctctgagtgtgaagacggcagcgac
gaggagaactgccccgtctgctcggccttccagttccagtgtgataaaggaggctgcatt
gatgctcaaaggcgctgcaatggtgaacccgactgtgctgataattctgacgagcaggac
tgtgagacgatctgtcctccgaaccagttccgctgtggtgacaaccagtgcatcactaag
aaacaacagtgtgacaactactctgactgtcctgacggatcagacgagctcgcctgtgag
tatgtgtctcctccttccagtgggatccccaacactgggcccaacaccatcggtccagtc
atcgccatcatcctgctggtctttgtgattggaggagcctattttgtctgccagcgcgta
gtgtgtcgacgctacaagggccctagtgggacttttcctcatgagtacatcagcggtacg
ccacatgtgcccctcaacttcatcgcccccagcagctcccagcacggcaccttccaaggt
atttcctgtgggaagtccatcatgagttcagtcagcctgatgggcagcagcagcagtgga
gctcctctgtacgacaggaaccatgtgaccggagcctcatccagcagctcctcatctacc
aagggagcattctaccctcagatcctgaaccctcctccgtccccagccactgaccgctct
ctctacaacacagagatcttctactcctccaacagtccatccaccaccagatcctacaga
ccctaccaccctgtccgtggtgctgccccacccaccacaccctgcagcaccgacgtctgc
gacagcgactacaccccccaccacctgccggccgggctggcgtcgtcagcgggccgctgg
aaggccacgggccacggtagccacggcaaacacaacaagtattatatggacctgaactca
gactcggacccctaccctccacccccgactccccgctcccagtacctgtcagctgaggag
agctgccccccgtccccttccacagagcgttcctacttccacctgtgcccccctcctccc
tcgccctgcaccgactcctcgtga
DBGET
integrated database retrieval system
