Seriola lalandi dorsalis (Yellowtail amberjack): 111647729
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Entry
111647729 CDS
T06058
Name
(RefSeq) exosome complex component RRP41-like
KO
K11600
exosome complex component RRP41
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111647729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111647729
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111647729
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111647729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111647729
NCBI-ProteinID:
XP_023253148
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MRGSRSRTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYP
RSQIDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAE
ESGGVSSLALALLPRGGQIALLQMDARLHQDHLETLIEAAMTACKGVSKVLDEVVRQHLQ
EVSVLTGE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggttcacgcagtcgcactcttcacgaccgggccgttatcaactgtcagtacagc
atggccacattcagcacagcagagaggaagaggagaccccatggggatcggaagtccact
gagatgagcctccacctgaagcagacgtttgaagctgctgtgatgacccagctctaccca
cgttctcagatagacatctatgtcaagattctgcagtcagatggaggaaactacagcgtg
tgtgtgaatgctgccactttggcagtgattgacgccggcatccccatgcgggactacgta
tgtgcctgcactgtcgggtttgtggatgagacacccctcgctgacctttgctatgcagag
gaaagtggaggagtgagctctctggccttggcactgcttccccgaggtggacagatcgct
ctgctgcagatggacgccagactacaccaggatcacctagagactctgattgaagctgcc
atgacagcctgtaaaggtgtgagcaaggtgctggatgaggtggtgcgacagcatcttcaa
gaagtgtcagtgctcactggagagtga
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integrated database retrieval system
