Seriola lalandi dorsalis (Yellowtail amberjack): 111648049
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Entry
111648049 CDS
T06058
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111648049
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111648049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111648049
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111648049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
fn3_2
NDNF
DUF2442
NDNF_C
hEGF
Glyco_hydro_66
Motif
Other DBs
NCBI-GeneID:
111648049
NCBI-ProteinID:
XP_023253568
Ensembl:
ENSSLDG00000012406
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MQMKGFLLGCLTVALLLQLSTAGLVKVIRHRREALMPKKTQENLTLPHPDQPVVFNHVYN
INVPSTSLCSVDLESPGGSEPKHKSMDMQNTEHMEQTVDGENQIVFTHRINIPKQACGCE
NQLPDIKDILNRLEMLESELSSLREQCGSGAGCCGAQVTGEVSIKPYCNGRGNWSTDTCS
CTCEPGWKGHNCTEPECPNDCQDQGRCVDGKCECFEGFGGDDCGIELCLLDCGDYGHCVE
GSCLCEEGFIGEDCTQTNCLNNCLGRGRCVEDECVCEEPWTGFDCSELICPNDCYDRGRC
INGTCYCEDGYAGEDCGELTCPGNCNNRGTCVNGQCLCQTGYSGEDCSKLTCPKNCHDRG
HCFNGKCICDPGFEGEDCSILSCPDNCSNRGQCINGECVCDIGYQGEDCSELSCLNNCQD
QGRCVDGQCVCDKGYTGEDCSIKTCPKDCMGRGECVDGKCQCFAGFTGKDCGELTCPNDC
LDRGHCVNGQCVCHKGFTGEDCSEKTCPKNCLERGYCVDGNCVCYEGFTGPDCSILTCPG
DCQNQGRCENGVCVCDEGFIGEDCSEVSPPKDLKVVEVNPETVDLTWENEMRVTEYLITY
MPTAAGGLELEMQVPGDQKMATVRELEPGVEYLISVYAVLSNKRSVPVSARVATHLPEPE
GLKFKSVRETSVEVQWDPLDIPFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLGPGQ
EYEVKLEVVKNKKRGPPASKNVFTMIDAPSQVDVRDVTDTTALVTWFQPVAAVDGISVSY
GPSSDPADRNVVELSSTDTQYHLGGLTPDTQYEVSLTARTGERTSIPVYEFFLTDLDAPR
DLQTVELTDESITLEWKNSQAEVDNYRIKYGPLSGGEHGELLFPPGPKDTTQAKITGLRP
GTEYGMGVTAVKDERESLPTTTNAVTALDAPKDLTVAEVTETSIVLEWKRPLAKLDSYRL
VYVSADGHRSEEVVSGSSESYTLRSLTPGMLYTVSIAAERGRRTSAPATISAPTEEEKPV
VTNVTISDVSWDSFLLSWSAEDGAFETFLIEVTDAETGAEWQNHTVPADARSLAISGLSP
TTWYRANLYGVHKGVLLDPVFADTITEAEPEVQALLVSDVTPDSFRLAWMAEDDTFDTFV
LMVSKAESPAQPRELVLGGEERSTAMTELTEDTEYKIEIFGLVLGKRSKSVTERVRTDLG
SPKGIRFSDVTDTSATVHWVIPRARVDSYRVTYVPAHGGNAKTLSVDGSESHTVLPNLTP
GVTYEVTIVAVKGQRESEPGSDSVTTALDKPRGLTAVNITDAEALLLWQPAIATVDGYVI
TYSADSVAPVMERVSGNVVEFEMTSLTPATHYTVKVYAVRDLAKSAATTTEFTTDVDAPQ
DLAASNIQTENCMLTWKPPRADITGYILSFESTDGTVREVVLSPTAVSYNMAQLSASTEY
SVKLQAIAGPKRSRVITTVFTTTGVLYRHPRDCSQALLNGDTSPGLYTIYLGGDESQPIQ
VYCDMSTDGGGWIVFLRRQSGRLEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAGGQYE
LRVDLRDKGETAYAQYDKFSVSEPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDI
AVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNF
RNLEGRRKRS
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgaaaggctttcttttaggctgcctgaccgtggccctgctcctccagctctcc
acggccggcctggtgaaggtcatccgccaccgcagagaggccctgatgcccaagaaaaca
caggagaacctcaccctgccccaccctgaccagccggtagtgttcaaccacgtctacaac
atcaacgtcccctccacgtccctctgctctgtggacctcgagtcgcccggaggttcagag
ccgaagcacaagagcatggacatgcagaacaccgagcacatggagcaaacggtggacggc
gagaatcagattgttttcacccaccgcatcaatatccccaagcaggcatgcggttgcgag
aaccagttgccagacatcaaagatatcctgaacaggctggagatgctggagtcagagctg
tctagtctgagggagcagtgtggcagcggggcaggctgctgtggcgcccaagttacaggg
gaagtgtccataaagccctactgtaatggccgtgggaactggagcactgacacctgcagc
tgcacgtgtgagcccggatggaagggccacaactgcactgaacccgagtgccccaatgac
tgccaggaccagggccgctgtgtggatggcaaatgcgaatgctttgagggctttggtggg
gatgactgcggtattgagctctgtctgctggactgcggtgactacggccactgtgtcgag
gggtcctgtctctgtgaagagggcttcatcggtgaggactgcacccagaccaactgcctc
aacaactgtctaggccgcgggcgttgtgtggaggatgagtgtgtttgcgaggagccgtgg
acgggcttcgactgctccgaactcatctgtccaaatgactgctacgaccgtggacgctgc
atcaacggcacctgctactgtgaggacggctacgctggggaagactgcggcgaactcacc
tgtcctggcaactgtaacaatcgtggcacgtgtgtgaatggccagtgtttgtgccagacc
ggctacagtggagaggactgctcaaagctcacctgccccaaaaactgccacgatagaggc
cactgcttcaatgggaagtgcatctgtgatccaggatttgagggtgaagattgctccatc
ctttcatgccctgacaactgcagcaacaggggccagtgcatcaacggagagtgtgtatgt
gatataggataccaaggtgaagactgtagcgagctgtcctgcctcaacaattgccaagat
cagggccgctgtgttgatggacagtgtgtatgtgataagggctacactggggaggactgc
agcatcaagacctgtccaaaagactgcatgggacgtggagaatgcgtggacggcaagtgc
cagtgcttcgccggcttcacaggtaaagactgtggtgagctgacttgccccaacgactgc
ctggaccgtggccactgcgtgaacggacaatgtgtttgtcacaagggtttcactggtgag
gactgcagtgagaagacatgtcccaaaaactgtctagaaagaggttactgcgtcgatggc
aactgtgtgtgttacgagggtttcaccggaccggactgctccatactgacctgcccggga
gactgccagaaccaggggcgctgtgagaacggagtgtgcgtctgtgatgagggcttcatt
ggagaggactgctctgaggtctcaccacccaaggacttaaaagtagtggaggtcaaccca
gagacggtggacctgacctgggagaatgagatgcgtgtgaccgagtacctgatcacctac
atgcccacagcagcaggaggtctggagctagaaatgcaggtgcctggggaccagaagatg
gccactgttcgggagcttgaacctggtgtggagtacctgatcagcgtctacgctgttctc
agcaacaagaggagtgttcccgtcagtgctagggttgcaacacatctgcctgagcctgaa
ggactcaagttcaagtcagtgcgggagacgtcagtggaggtacagtgggaccccctggac
attcccttcgatggctggaacctcatcttcagaaatacaaaagaggaggatggtgagatt
cttaactcccttggccgtccagagaccacctttgagcagtcgggcctggggcccggccag
gagtacgaggtcaaactggaggtggtgaagaacaagaagcgtggaccgcctgcctccaag
aacgtcttcacaatgattgatgcccccagccaggtggacgtgcgtgacgtgacggacacc
acagcactggtgacatggttccagccggtggccgcggtggatggaataagcgtctcctac
gggcccagctccgaccccgctgaccgcaacgttgtggagctgtcctccactgacacccag
taccacctgggaggcctcacccctgacacccagtacgaggtgtccctgacagctcggaca
ggagagaggaccagtattcctgtttatgagtttttcctcacagacctggacgcccccaga
gacctgcagacagtggaactgacagacgaaagcatcactcttgagtggaagaacagtcaa
gctgaggtggacaactatcgcatcaagtatggacctctgtctggaggtgagcatggagag
ctgctcttccccccaggacccaaggacaccacccaggctaagatcacaggcctgagacct
ggcacagagtacgggatgggtgtcacggcggtgaaagatgagcgggagagtctgcccacg
accaccaatgcagttactgccctggatgctccgaaggacctgaccgtcgcagaggtgacg
gagaccagtattgtgctggagtggaagcgccccctggccaaactggactcctacaggctg
gtctatgtctcagctgacggccacaggtctgaggaagtggtctcaggcagttctgagtcg
tacaccctgaggagcctgacgcccggcatgctgtacaccgtcagcatcgctgctgagagg
ggccgcaggaccagcgcaccggctacaatctcagcacccacagaggaggagaagcctgtg
gtgacaaatgtcactatcagcgacgtgtcatgggacagcttcctcctgtcctggtctgcc
gaggacggggcgtttgagacctttctgatcgaggttacagatgcagaaacgggcgctgag
tggcaaaaccacacggtgcctgctgatgctcgcagcctcgccatctctggcctctccccc
accacctggtacagggccaatctgtacggggtgcacaagggggtcctcttagaccctgtc
tttgcagacaccatcacagaggccgaaccggaggtgcaggctctcctagtctctgatgtc
acccccgacagctttaggctggcctggatggctgaagacgacaccttcgacacctttgtc
ttaatggtcagcaaggctgaaagcccggcccaaccaagagagctggttctgggcggcgaa
gagcgaagcacagcaatgacagaactcactgaggacacagagtacaaaatcgaaatcttt
ggcctcgttctgggaaaacgctccaagtctgtaaccgagagggtgagaacagacctgggc
tcacccaagggcatccgcttctccgacgtcaccgacacgtccgccactgttcactgggtg
attccaagagctcgggtggacagctacagggtcacttatgtgcctgctcatggaggtaac
gctaagacgctgtcagtggatggctctgagtctcacactgtgctgcccaacctgacgccc
ggggtcacctatgaggtcaccatcgtcgctgtcaagggtcaaagggagagcgagcctggg
tcagacagtgtcaccacagctctggataagcctcgtggtctgactgcagtcaacatcaca
gacgctgaagctctactactctggcagcccgccatcgctactgtcgatggctacgtcatc
acctacagcgctgactcggtggctccggtgatggagcgcgtgtccgggaacgtggtggag
tttgagatgacttctctgacaccggcgacacactacaccgtgaaggtgtacgctgtcagg
gacttggccaagagtgcagccaccacgacggagtttaccaccgatgtggatgccccccag
gatctggctgccagtaacatccagacagagaactgcatgctgacctggaagccgcctcgc
gccgacatcaccggatacattctcagcttcgagtccactgacggcaccgtccgggaggtg
gttctgagtcccactgctgtgtcatacaacatggctcagctcagcgcctccacagagtat
tcagtcaagctgcaggccatcgctggtcccaagagaagcagagtcatcactactgtcttc
accaccactggcgtgctgtacagacaccccagggactgttcccaggccctgctgaatggt
gacacctcaccaggcctgtacaccatctatctgggtggagatgagagccagcccatccag
gtctactgcgacatgagcaccgatggaggcggatggatcgttttcctcagacgacagagc
ggtcgactggagtttttccgcaactggaagaattacacggccggcttcggtgacatgaat
gatgaattctggctcggtctgtccaacttacataagatcacagctggaggtcagtacgag
ctgcgagtggacctgagagacaagggagaaacagcctacgctcagtacgacaagttctcc
gtctctgaacctcggacccgctacaaagtccacgtaggaggatacagtggaacagcaggc
gactctatgacctaccaccacggtcgtccattctccacttacgaccacgacaacgacatt
gcagtcaccaactgcgccctgtcctataagggagcgttctggtataaaaactgtcaccgt
gtcaacctcatgggacgatatggagataacagtcatagcaagggtgtgaactggttccac
tggaaaggccacgagcactcgatcgagtttgccgagatgaagatcaggccttccaacttc
agaaacctggagggaaggaggaaacggtcataa
DBGET
integrated database retrieval system
