Seriola lalandi dorsalis (Yellowtail amberjack): 111648234
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Entry
111648234 CDS
T06058
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111648234 (pcdh19)
Cell adhesion molecules [BR:
slal04515
]
Cadherins
Protocadherins
111648234 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
111648234
NCBI-ProteinID:
XP_023253834
Ensembl:
ENSSLDG00000003423
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MQTKEMELIQLIAVFLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCVISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDAFKIDPRTGIIT
VNGVLDYETTQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQDYESFSTILVDGRLDREQKDTY
NLTIQAEDSGIPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQEPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPIPARAKSPEHSRNVIALSIEA
TTVDVPHYEDGTTKRTFATFGKDGPEDVERGEIKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPVSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaaggagatggaattaatacaattaattgctgtgttcctcttattttgggtc
ggggctgaggctgttatcaacctaaagtatggaataaacgaggaaatgaagcccgggtca
gtgattggaaacgtgacaaaggacgcactaaagcaaggatttcagattgcaccgcagccc
ccgtacttaagggttatttccaattcagaaccacgatgggtggaactgagtccagccgga
atccttacaacccaaatgaaaatagatcgggatgtagtttgtcgacagaacccaaagtgt
gttatttccctagaagtgatgtcaaactccatggagatctgtgtcatcaaagttgaaatt
gaggatttgaacgataacgcacccagattcccaacgagccacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atcttcggagttcagtcatattccatcaccccaaatgagcttttcggactagaaataaag
acgagaggggatgggtcaaaaattgctgagcttgttgtgcaaaaatcgttagatagggag
acacagtctcactacacatatgaaatcagcgcagaagatggaggagaccctccaaagata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaacaaccctgtctttgac
gagccagtgtatacagttaatgtgatggagaattcccctatcaatacgttagtcatagac
ttgaatgcaacggatcctgacgagggcactaatggagaggttgtgtactcgttcaacagt
tacgtcaccgagaaaacgagggatgcgtttaaaattgaccccagaaccgggatcatcact
gtcaacggtgttttggattatgaaacaacgcaaatatacgagatcgacgtccaggccaaa
gatctaggtcccaactctatcccggctcactgcaaagtcacagtgaatgttatggatacg
aacgataacccacctgtcatcagtctactctcactgaacacagagatggtggaagttagt
gaaaacgcgcagcgtggatatgtcattgcgctagtgagggtgtcagataaggattctggg
gcaaatggcaaagtgcagtgcaggctgcagggcaatgttccgttcagactgcaagattat
gaaagcttctccactatactagttgatggcaggctggacagagagcaaaaggacacatac
aacctgaccatccaagcggaggacagtggcatccctcctttacgcgccacaaaatctctg
gtagtcaaagtcacagatgaaaatgacaaccctccccacttcctcaagccacactatcaa
gagatggtgatggaaaacaacctccctggttcatgtctgcttgcagtgtcagcggaagac
ccagacctggggatgaatggcacagtttcatactctatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatctggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagttttagccagagacaatggtaat
ccctctttatcaagtaacgccacggtgcgtattgtggtgttggatgtcaacgacaacaca
cctgttatgacaaaccctcccctggttaatggcacagcggaggtttccatccctagaaac
gctggggtgggttacatggtgacccaggtgaaagcagacgactatgacgagggggagaac
gggcgcctgacctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgcaaagtccacctacgagatc
acagtggtggcgagggaccacggcaagccttccctctccgcctcggcctacatcgtggtg
tacctctccccagacctgaacgcacaggagcctattggacctgtcaacctgtccctcatc
ttcatcatcgccctgggctctatcgcagccatcctgtttgtcaccatgattttcgtggcg
gtgaagtgcaagagggataataaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcctggtgccacgagacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccatcagcagagcctg
ccgctgggttgcaggcgctcggagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcggctcccaaccatggctatcagcacccattcactgggcagggccaccaacagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacatcgacattcaag
gacctggaggggaacagtctgaaggacagcggccacgaggagagtgaccagaccgacagt
gaacatgatgtccagagaggacactatgttgacacggctgtcaatgacgtgctgaacatg
accgtcccccccaatgtttgccagctgcctgaccaagatcccagcgagggctttcactgc
caggatgagtgtcgcatcctaggccactctgaccgttgttggatgcctcgcgtcccaatc
ccagcacgtgccaagtcacccgagcacagccgtaatgtcatcgctttgtctatcgaggcc
accacagtggatgtgccccactacgaggatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggcctgaggacgtggaacggggagagataaagggaaagcggactcaggag
tctcaggtgtgtagccccaaggccaatggaggggctgttcgtgaagctggcaacgggcgt
gaggcagcaagccccatcacttctcctgtgcacctgaagagcccagtgtccaagccgtca
tctgcctacaacacactgaaatgccgcgacgcggagcgaattgccaaccacagcctgctg
cggcagccggaggggaaggacagtgagccggctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
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integrated database retrieval system
