KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111648496
Entry
111648496         CDS       T06058                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111648496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slal03021]
    111648496
   03036 Chromosome and associated proteins [BR:slal03036]
    111648496
Transcription machinery [BR:slal03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     111648496
   Coactivators
    SAGA/TFTC/STAGA complex
     111648496
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     111648496
    STAGA complex
     111648496
    TFTC complex
     111648496
    SAGA complex
     111648496
    SLIK complex
     111648496
SSDB
Motif
Pfam: TFIID_NTD2 WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 111648496
NCBI-ProteinID: XP_023254096
LinkDB
Position
Unknown
AA seq 354 aa
LSLGAVQTESGCANIVSAAPCQADPQQYEAQYSRLRSFLSETEISWAKEVSSVLYPLFIY
LHLDMVRCGLKGAVDGFYSRFHSAFLQDSEQRAIIEQLRHVLTAQDVAANPKLSAFLEHK
YVVHLTEPAYSYLLRYLQSEDNSALCRALSTHLQVEVTASRRTDYQLYGTASGATATPNS
TSTWAGVDGAEGGEGVEVPAGIPQSEAALDALQDCIKKVREGPPSLTTVCFYAFHHTEQM
LNTAEVSADSRLLAAGFDSSTVKLWSLRARKLKARPHQADVSRIHLACDVLEEEVDEEDG
SGSEVKTLRGHSGPVFRTSFLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHA
NT seq 1063 nt   +upstreamnt  +downstreamnt
ctctctctcggagcagtgcagacagagtcgggttgtgccaacatcgtctctgctgctccc
tgccaggcggacccgcagcagtatgaggctcagtactccaggctgcgctcctttctctca
gaaacagaaatatcctgggcgaaggaggtgagcagcgtcctctacccgctcttcatctac
ctccacctggacatggtgcgatgtggcctgaagggggcagtagacggtttctacagtcgt
ttccacagtgcctttcttcaggacagcgagcagcgtgccatcatagagcagctccgccat
gttctcaccgctcaggacgttgcagccaatcccaagctgagtgctttcctggagcacaag
tatgtggttcacctgacggagccggcctacagctacctgctgcgttacctgcagagcgag
gacaacagcgccctctgcagggccctcagcacacacctgcaggtggaggtcaccgcctcc
aggcgtacggactaccagctgtacggaactgccagtggggcgaccgccaccccgaactcc
acctcgacctgggcgggagtggacggggcggagggcggggagggggtggaggtccccgca
gggatcccgcagagcgaggcggccctggacgctctgcaggactgcatcaagaaagtccgc
gagggccccccctcgctcaccaccgtgtgcttttacgccttccaccacacggagcagatg
ctcaacaccgccgaggtctcggccgacagccggctgctggccgccggcttcgacagctcc
acggtgaagctgtggagcctccgagccagaaagctgaaggcccggccgcatcaggccgac
gtgtcgcgcatccacctggcctgcgacgtgctggaggaggaggtggacgaggaggacggc
tcgggcagcgaggtaaagacgctgcgaggtcacagcggcccggtgtttcgcacgtccttc
ctgacggacagctccgggctgctctcctgctccgaggacacgaccatacgttactgggac
ctgggcagcttcaccaacacggtgctgtaccagggccacgcct

DBGET integrated database retrieval system