Seriola lalandi dorsalis (Yellowtail amberjack): 111648891
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Entry
111648891 CDS
T06058
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111648891
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111648891
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111648891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
DUF3199
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111648891
NCBI-ProteinID:
XP_023254402
Ensembl:
ENSSLDG00000000504
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
FFFPFFNIILLFYFVITLAGEVTEDELFNRLQQIKDGPEQQNNTPSAETGEDPVVQPESS
EDPASGDSLLDWLNTVRRTGNTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAE
QQAAAEGEQESPEESPEGQEVGANAEPQVPMETEVVEEPVVEELAVIVEPEPEPELEEVV
SQEILGEPPSSPAAPPVQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDG
LANLRQAHSSQGPNTATSAPPVPQVEGSSRTRQHVLSRQSTADSDVQPPRAVAELVPEAQ
NVESQEGEAAGGEGGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSN
NTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMT
GFGELGYLMDSDSDSSDSNRGANTPSDLGEALNNPDATPAAAPAADVDEPPVAAGVRART
VETDTVEGLATVPPASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQ
IDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR
AVLVSANRESVV
NT seq
1841 nt
NT seq
+upstream
nt +downstream
nt
tatttttttttcctttttttaatatcatacttttgttctattttgtaatcactcttgcag
gggaggtaacagaggacgaactgtttaatagacttcagcaaatcaaagatggtccagaac
agcagaataacacacccagtgctgaaactggagaagatccagttgtacaaccagaaagct
ctgaggatcctgccagtggggatagtctcctggattggctgaacacagtgaggcgcacag
gcaacacaaccagaactggtcatcgtggaaaccagtcatggcgggcagtcagccagacta
acccaaacagtggcgattttcgcttcagccttgaaatcagtgtgaaccgtaaccttgctg
agcagcaggcggctgctgaaggggagcaggagtctccagaggaatctccagagggacaag
aagtgggggcaaatgctgaaccgcaggtccccatggagacagaagtggttgaagaaccag
ttgtagaggagctggctgtcatagtggaaccagaaccagaaccagaactagaagaggttg
tttcacaagagattttaggagaacctcccagctcacctgctgccccaccagtacaacccc
cactttctccgtctccacgcagaggacaaaggagagcccggagtcgcagtccggaaccac
gcaggaccagggcccgtacagcaaggagccgctctcctctcagcttggatcagctggatg
gtcttgctaatctacgtcaggctcacagttctcaaggccctaacactgccaccagtgcgc
cccctgtgcctcaagtggagggcagttcacggactcgacaacatgttctttccaggcaaa
gcactgctgacagtgatgttcagccacctagggctgttgcagaattggtcccagaggccc
aaaatgttgaatctcaggaaggagaagctgctgggggagaagggggtggagaaggggggg
cagcagggcgccgtccccctactattatgcttgatctccaggtgcgtcgtgtgcgtccag
gtgaatatcggcaaagagacagcattgccagccgcacccgctcgcgctcccagaactcaa
acaacacatttctttatgagagtgagcgtggtggatttcgtaggactttttcacgctctg
agcgtgctggtgtgaggacctacgtcagcactattcgcatccctattcgaagaatctctg
atgcaggtttaggagaggcaacctcaatggctctccaatctatgattaggcagattatga
ctggttttggtgaacttggctacctcatggattcagactctgattcttcagattcaaacc
gtggagccaacacaccttcagatctgggtgaagccctcaacaacccggatgctactcctg
ctgctgctcctgctgctgatgttgatgaaccacctgtggctgctggagtcagagcaagga
cagttgagactgatacggttgagggccttgccactgttccacctgcttctggtggcagag
ctcgaccgagaccacctatcagcctagaggagcccagctcattgcccttcctacggctcg
cccacttcttcctcctaaatgatgacgatgaagaccagccccaaggactgacaaaagagc
agattgacaacctctccatgcgcaactttggtgagagtgatgccttgaagacttgcagtg
tctgcataacagagtatgcagaaggtaacaagctgcgtaagctgccctgttctcatgagt
accatgtgcactgcatcgatcgctggctgtctgaaaactccacttgccccatctgccgca
gggctgtcctggtatcggccaatcgagaaagtgtggtttag
DBGET
integrated database retrieval system
