Seriola lalandi dorsalis (Yellowtail amberjack): 111649238
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Entry
111649238 CDS
T06058
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03083
Polycomb repressive complex
slal04980
Cobalamin transport and metabolism
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111649238
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
111649238
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111649238
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111649238
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slal03036
]
111649238
03029 Mitochondrial biogenesis [BR:
slal03029
]
111649238
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111649238
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
111649238
HMT complexes
COMPASS/SET1 complex
111649238
MLL-HCF complex
111649238
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
111649238
Mitochondrial biogenesis [BR:
slal03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111649238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
111649238
NCBI-ProteinID:
XP_023254755
Ensembl:
ENSSLDG00000011619
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSATPSQ
PVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLT
QVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTG
TVSTSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTSLTSSSTLPSST
ITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATMGAGQVCSNPPCETHETGTTNTATTSSATMGAGQVCSNP
PCETHETGTTNTATTASSNMSALRVCSNPPCETHETGTTNTATTASANMGGVQQVCSNPP
CETHVTGTTNTATQSSSNMTTGQTGTVQRVCSNPPCETHETGTTNTPSTATSSMGGDQTS
TATGLVQRVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEATESTSSTEVAPTT
AATGMVTTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEQMQTDEAASAEAA
PTEGGATAMETQAEGEAAAATALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVMNEGDSAGESQQPTNIPIMLTQQELAALVQQQQQLQEA
QAAAQQATVDTSLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPS
STFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGIVKVTN
MVVTHFYVPADDSQGDDDSGIMPDYSQMKKMELQPGTAYKFRVAGINACGRGAFSEISAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPA
QLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESG
KDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctaggatggtccggtcctgttccccggcccaggcatggacacagagctgtg
gctataaaggagctcatggttgtttttggcggtggaaacgaaggaattgttgatgaatta
catgtatacaacaccgcaacaaaccagtggtttatcccagctgttcgaggcgatatcccc
cctggttgtgctgcgtatggttttgtctgtgatggcacgcgattgctggtgtttggagga
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggag
tggaaaaaattgaaagcaaaaaaccccaaaaatgggccccctccttgtcctcgtcttggc
cacagtttttccctggtgggcaacaaatgctacctgtttggtggattagccaatgacagc
gaggacccaaaaaacaacattcccagatacctgaatgatctgtacacactcgagcttcgt
gctgggtccagtgtggttggatgggatattccaatcacatatggagttctgcctcctccc
cgtgagagccacactgccgtggtgtacacagaaaagacgagcaggaaatctcgcctgata
atctatggagggatgagcggttgtcgtctgggagatctatggacacttgatattgatacc
ctgacatggaacaaaccatcagtaagcggcacagcaccacttcccagaagtcttcactct
gccactaccatcacaaacaagatgtatgtttttggaggatgggttcctctggtaatggat
gatgtgaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgccta
aatcttgattccatgtgttgggagacagtgttgatggatactctagaagacaatatcccc
agggcccgtgctggccactgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgctgtaaagacctctggtacctg
gaaacagagcgaccacatgcccctgcccgggtgcagttagtccgtgccaacacaaactct
ctggaggtgagctggggtgcagtctccactgctgacacttacctcctgcagctacagaag
tatgacatccctgctactccagctgcagcctcaccagccatgagcgcaaccccctcgcag
cctgtgaactctccaaagagcccagcaccggctgcagcagcaccctctgcccagagcctg
ccacagacagctgttttgaaagttgcagctcaacagtctgccactggcacatctgttgtc
acagtccgccccagccagcctgggaaatcccctgtcactgtgacatctcttcctccaggt
gtccgaatggtagtacctgcccagaccacccaaggatcgccaattggcagtagccctcag
atgagtggcatggcagctttagctgcagcagctgcagcaacacagaagatcccgccgtct
tctgcaggcactgtcctcaatgttcctgcgggtgccaccattctcaaaacagtagctgtt
tccccgggcacaaccactgtgaaagtggcttctccagtcatggtcagtaacccagccacc
cggatgctgaagactgctgcagctcaggtgggcacagcaactgcgtcctctcccaccacc
accagacccatcatcactgtacacaagtctggtgcggtcacagtggcccagcaggcccag
gtggtcaccactgtggtgggaggagtcaccaaaaccatcaccctggtcaagagtcccctc
accatgggcagcagtggcacgctgatctccaaccttggcaagatgatgtctgtggtacaa
accaagccagtgcagacatcagctgtcacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagccggcaccatcctgaaactggtgacctctgca
gatggaaagcccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaagccc
actatcctcaacatcagcggtgtctctcctaccaccactaagcagggcaccaccatcatt
aagaccatccccatgtcggccatcatgacccagcctggagccacaggtgtgacaagcagt
gcgggcatgaaaacacctatcacgatccttacaacaaaggtgatgacaactggaactcct
ggtaaaatcatcactgcagtacccaaacttgctactgcagctggccagcaaggattgaca
caggtggttttgaagggtgcccctggacaaccaggaactattctgcggactgtgcccatg
agcacagtgggtggtgttcgacttgttacgccagtgacggtatctgcagtcaagcccact
gtcaccactctggttgtcaaggggactactggtgtcaccactcttggaacagtcactggt
acagtctctaccagtctggcaggaggcacggtggacagttccaacgcctctctggttact
cccatcaccacactgggaaccatcgctaccttgtccagccaggtcatcagcccagctgcc
ataactgtgtcagctgctcagaccagtctgacttcttcctccacattgccctcctctacc
atcacagtgcagaaccagcccacccaggtgactctgatcacaactcccagtggagtagaa
gctcaaccagtgcaggatctaccagtgtccatcctggcttcaccaacctctgagcagccc
agttccactgaggccggagcagctggagagggttctgggaccgtcaccctggtctgctct
aatccaccctgtgaaacccacgagacaggaaccaccaacacagccaccacctcttctgcc
accatgggagcagggcaggtctgctctaaccctccctgcgaaacccacgagacaggaacc
accaacacagccaccacctcttctgccaccatgggagcagggcaggtctgctctaaccca
ccatgtgagacccatgaaacaggaaccaccaacacagccacaactgcatcgtcgaacatg
tcagcgctccgtgtgtgctccaacccaccatgtgagacccacgaaactgggacaactaac
acagctaccacagcatctgctaatatgggaggggtccagcaggtgtgctccaacccaccc
tgtgagacccacgtgacaggcaccaccaacacagccacccagtcgtcatctaacatgacc
acgggccagacgggcaccgtgcagagggtgtgctccaacccgccttgcgaaacccacgag
acagggaccaccaacaccccgtccacagccacctccagcatgggaggtgaccagaccagc
acagcaacgggcctggtccagagggtgtgctccaacccaccctgtgaaacacacgagact
gggaccaccaacacagccaccactgccacctgcagcatggagacaggcgaaggcacagca
gcccagcagacagaggaggcaactgaaagtaccagcagcacagaagtggcccctaccact
gcagcaactggcatggtcaccaccacccagggcagggccatcactaccgtcactcagtct
acaccagcacctggaccctctgtaccatcgatttcatcaatcacagagggcgttagtact
gctgccagctccacagaggaacaaatgcaaactgatgaggcagcatcagcagaagctgca
cccacagaagggggagctactgctatggagacacaagcagagggagaagctgcagcagcg
acagcactgaacctgccctcagagctaatgtctgagggtcagggagccacactcatggtg
acagggctgtcggacgaggaactggctgtgactgcagcagcagaggctgccgctcaggca
gcagccacagaagaagcccaggccctcgctattcaggctgttctccaggcagctcagcaa
gctgtaatgaatgaaggcgattccgctggagagagccaacaacccaccaacatccccatc
atgctgacccagcaggagctggcagcgctggtacaacagcagcagcagctgcaggaggct
caggctgcagcccagcaggccactgtggacacaagcttgcccactgaaggtctcgcccct
gctgacagcctcaacgacccctctgtcgagagcaacggacacaacgagatggctgccgca
gtcaccagtgctgtagcatctctgctgccacgtaccactgctgagacacttgctccatca
agcacctttgcaccctctgtatcggtggcaagcccagccaagctgcaagcagcagccgct
ctcgcagaagtcgccaatggcatcgagggagagaagcaagcccctcagccaaccccagtg
aagcctgttgtaaagaaagagaaccaatggttcgatgttggaattgtaaaagtgacaaat
atggttgtcacccacttctatgtgccagcagatgattctcaaggagatgatgactctggc
atcatgccagactacagccagatgaagaaaatggagctgcagcctggaacggcttataag
ttccgtgttgctggaatcaacgcttgtggtcgtggagctttctctgagatttctgctttc
aagacttgcctaccaggcttcccaggggcaccttgtgccatcaaaatcagcaagagccca
gatggtgcccacctcacctgggagccaccctcggtgacgtcagggaagatcatcgagtac
tcggtgtacctggccatccagagcaaccagacagctgaagccaaggcctcaaccccggcc
cagctagccttcatgcgtgtgtactgtggacccaacccctcatgcttggtgcaatcgtcc
agcctctccaacgcccacatcgactacaccaccaagccagccatcatcttccgcatcgcc
gcccgcaacgagaagggatacggtcctgccacccaagttcgatggctgcaagaatctggc
aaagatgctgcctcggcaaaaccggcccccaaaagaccaggcacctctccagatactaag
gctactggtccaaagaaagcaaggacggaccagtga
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integrated database retrieval system
