KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111650212
Entry
111650212         CDS       T06058                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018  RNA degradation
slal03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111650212 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111650212 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111650212 (lsm7)
   03041 Spliceosome [BR:slal03041]
    111650212 (lsm7)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111650212 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111650212 (lsm7)
Spliceosome [BR:slal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    111650212 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 111650212
NCBI-ProteinID: XP_023255825
Ensembl: ENSSLDG00000016339
UniProt: A0A3B4XYW1
LinkDB
Position
Unknown
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagaaaagaagaaaaaggagagcatcttcgacttgtcaaaatacatcgac
aagccgattcgcgtgaagtttcaaggaggacgagaggccagcggtgtcctgaaagggttt
gatcctctgctgaacctggtgctcgacggcacaatcgagtatatgcgtgatccagatgac
cagctgaagctgacagaagataccaggcagctggggctggtggtctgcagaggaacctct
gtggtgctaatctgtcctcaggacggcatggaggccataccaaacccgttcatacagcaa
caggacggctaa

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