Seriola lalandi dorsalis (Yellowtail amberjack): 111650213
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Entry
111650213 CDS
T06058
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111650213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111650213
Membrane trafficking [BR:
slal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111650213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
PHDvar_NSD
Prok-RING_1
PHD
Motif
Other DBs
NCBI-GeneID:
111650213
NCBI-ProteinID:
XP_023255826
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MDFDGEPDEDSFPILVRSMSTSRRHSWGVPVSPIDLRRRLSLDTTAMDSDGEREDDEESH
QQTYSCTACPEDETDGPRMRFPCPRARVTSMAGGVPGRHLYSRSEILATDECSRAAHISR
VVQTSKQAARAAGAEEFDPEENLHSTEGQSHIAKQRNNRSDVKESGNVTWYEFLSNENEE
EEDRTEKVEKGTKVKRTLSSLRNRMAGSFNKDKGKNREKEQQKEKWKEKEREAKEKVCGS
SRMSSGHHLVPGAFSSCATCSLCGKSLQKKHGLQCMNCAVNVHKNCKSLLGDCTSSKNKR
DFLPKTSSSGSPNLALKDRDRERDQAGPASSQTLDGHQGFLSTPGMTVSQWGPNTQLTAA
HTTYSSATPTSSLGHSLHHHNSSGSLPGEMDETDALRSKRCNEDAISLAPSTTESIIVED
AHYTAVRADLESDAQDLEAESWSLAVDQQYVKRHSKEMVKRQDVIYELMQTEMHHVRTLK
IMLRVYVRELKENLQMDSGRLDCLFPRLENLLDLHTHFLSCLKERRRENLISPSDRNYTI
NRVADILITQFSGEIGERMKESYGDFCSHHTEAVSYYKEQLQNNKKFHNIIRKINNLSIV
RRLGVTECILLVTQRITKYPVLVERILHNTEVGTEEHEDLTRALGLIKDTIIKVDTLVNL
YEKMSRLRDIYNKVELKALGKIKDGRVFRREDLAPSRRWLLHEGTVNWKAASGRLKDILA
VLLSDVLLLLQEKDQRYVFATVDSKPSVISLQKLIVREVAHEEKAMFLICASSNEPEMYE
IHTTSKEERNTWMTQIRQAVESCPHTEERLISEEEEARASRFKEFQERLSQKDTVIVQAL
TEKLQLFADMAESLAGLEDTASRSRLLLRGDASDLQQGETLLKGAITEVENLQNLLQSGV
REEAPASRLEEGSGSGALPRRADTFGGYDSSPTILSKNGSVRKNSSGESRNRDRSQRASS
DPQLKDLCGSHTLEQTVDESSCSPARWNRIWSNSFPEAEFFDRVVMLSQRLYSLQAIISQ
QDSYIELQRASLTERASLPGRHRGNVLLEQEKQRTLALQREELASFHKLQSQHRQEQQRW
EKERERHRQQVEATEARLRQREEECKRLEEHLAKEKEELDRQRETYQQDLERLRESTRAV
EKEKERLEHQKKIKRKTIEVAPLSGSLNGELLMSSGLTNSTSASDLPLPQKPLVRASLSV
APADYPERPEVMLRRETGSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIPTKLAAFSSGK
GKGGKSGKASHRTDSTASVDMKQMLKLSGRDENAQKAKRSISPHQQLSLTALHHHTDQLS
PPDSAGPDSQTTSSVSTSLPANIQKPPMPPAQSHPQPSMQTSTMPPHSQSSGFLQFQSHV
QPQGLSPNAQAHVPVNHGLSHSHSHSHSHSHSMPPPYKIPTEDLNKEDVIFF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacggagagccagatgaggacagctttcctatcctggtcagatccatgtca
acgtcccgaaggcacagctggggcgtccctgtgtcccccattgacctgcggaggagactg
agtctggataccacggccatggacagcgatggagagagagaggatgacgaggagagccat
cagcagacctacagctgcacggcctgccctgaggatgagacggatggtcccaggatgagg
ttcccctgtcccagagccagggtcacaagcatggccggtggtgtgcctggcagacatctg
tattcccgctcagagatcctcgccacagatgaatgttcccgagctgcacacatttctcga
gttgtgcagacatccaaacaggccgcaagggcagcaggagcggaggaattcgacccagaa
gaaaacctacattctactgagggacagagccatatagcaaagcagaggaacaacagatca
gatgtcaaagaatcaggaaatgtcacttggtacgagttcctctctaatgagaatgaggaa
gaggaggatcgtacagagaaggtggagaaaggcaccaaggtgaagaggacccttagctct
ttgaggaacaggatggctggctccttcaataaagataagggtaagaaccgagaaaaagag
cagcagaaagagaagtggaaggagaaggagagggaagccaaagagaaagtatgcggcagc
agcaggatgagcagtgggcatcatttggtgccaggcgctttttccagctgtgccacctgc
tcactgtgcggcaagtccctgcagaaaaagcatggcctgcagtgcatgaattgtgccgtg
aacgttcacaagaactgtaagtctctgctgggtgactgcaccagcagcaagaataagaga
gattttctaccgaagaccagctcatcaggatctcctaaccttgcgctaaaagaccgggac
agagagcgggatcaggcaggccctgcctcatcacagaccctggatggccaccaaggtttt
ctcagcaccccaggcatgaccgttagtcagtggggacctaacactcagctgactgccgcc
cataccacctactcctctgcaacccctacctccagccttggccacagcctccatcaccac
aacagctcaggatccctccctggggagatggatgagacagatgctctccgctccaaacgc
tgcaatgaagacgccatttccctcgctccctccaccaccgagtctatcatcgtagaagat
gctcactatacagcagtgcgggctgatctggagtctgatgcccaggacctggaggcggag
tcatggagtttggcagttgaccagcagtatgttaagaggcactctaaagaaatggtgaag
agacaggatgtgatatatgagctgatgcagacggagatgcaccatgtgcgaacactgaag
ataatgcttcgtgtctacgtccgagagctgaaggagaacctccagatggactcgggcagg
ctggactgtctgttcccccgcttggaaaacctcctcgatcttcacacacatttcctgtct
tgtctcaaagagcggcgacgagaaaacctcatctcacctagcgacaggaactacaccatc
aacagagtggcagacattctgatcacgcagttctcaggtgaaatcggagagaggatgaag
gaaagctatggagatttctgcagtcaccacactgaggctgtcagctactacaaagaacag
ctgcaaaacaataaaaagttccacaacatcatacggaaaatcaacaacctgtccattgtg
cggaggttaggagtgaccgagtgtattctgttggtgacgcagcgcattaccaagtaccca
gtactagtggagcgtattctacacaacactgaagtgggaacagaggagcatgaggatctg
actcgggctctgggtctgattaaggacaccatcattaaggtggacacgctggttaatctc
tatgagaagatgtcccgactcagagacatatacaacaaggtggagctcaaagcactggga
aaaatcaaagatggccgagtgtttcgcagggaggacctggcaccgagcaggagatggctg
cttcatgagggcacagtcaactggaaagctgcatctggcagactcaaagatattcttgca
gttcttctgtcagatgtgttgctcttgttacaagagaaggaccagagatatgtatttgcc
actgtggatagcaagccgtcagtgatctctcttcagaagcttatagtcagggaagtggcc
catgaggagaaagccatgtttcttatctgtgcctcctccaatgagccagagatgtacgag
atccacaccacctccaaggaggagcgaaacacttggatgacacaaatacggcaagctgtc
gagagctgtcctcatactgaagagaggctgatcagtgaggaggaagaggctcgagcttcc
aggttcaaagagtttcaagagcggctgagtcagaaggacacagtaattgtgcaagctctt
actgagaagctgcagctgtttgcagacatggcagagtctttggcaggtctagaggacaca
gcttcacgttctagacttctgcttcgaggagacgcctcagacctccagcagggggagacc
ctgctcaaaggagctatcactgaggtggagaacctccagaacctgctgcagtccggagtg
agggaggaggctccagcctctcgactggaggaaggaagcggctctggggccttgcccaga
cgagcggatacttttgggggctatgacagcagccccaccatccttagtaagaatggcagt
gtgaggaagaactcttctggcgagtccagaaacagagacagaagccagagagcaagctcc
gaccctcagctcaaagacctctgtggcagccacaccctggagcagacggttgatgagagc
tcctgctctcctgccagatggaaccgcatctggtccaactccttccccgaggctgagttc
tttgacagagtggtgatgctctcccaaaggctctatagtctgcaggccatcatatcacag
caggacagttacatcgagctgcagcgggcctctttgacagagcgggcatccctgcccggg
cgccaccgagggaacgtgctcctggagcaggagaagcagcggactctggccctgcagaga
gaagagctggccagcttccacaagctgcagtctcagcaccggcaggagcagcagcgctgg
gagaaggagagggagaggcaccgccagcaagtcgaggccactgaggccaggctccgacaa
agggaggaggagtgcaagcggctggaggaacatctggcaaaagaaaaggaggagctagac
aggcagagggagacgtaccagcaggacctggagagactgagagagtccaccagagctgtg
gagaaagaaaaggaacgcctggaacaccagaagaagatcaagaggaagaccattgaggtg
gctcctctgtctggcagtctgaacggggagctcctcatgtcgtctggcctcaccaactcc
accagcgcctccgatctgcccctgcctcagaagcccctagtgcgcgccagcttgtctgta
gcgccagccgactatccagagcgccctgaggtgatgttgcggcgcgagacgggctcctcc
accctgccactgaagacagaagtgccgctccatctcttcagcaccaccaaccagcagcac
aaactggtcggggtgcagcagcagatccccaccaagctggccgccttcagcagcggcaaa
gggaaaggaggcaagagtggtaaagcttcacatcgcactgacagcacagcctcagtggat
atgaagcagatgctgaagttgtctggccgagacgaaaatgcccagaaggccaagcgctcg
atcagcccccaccagcagctctcgctgacagccctgcatcaccacacggatcaactcagt
cctccagacagcgcaggaccagacagccaaaccacctcctcggtcagtacctccctccct
gcaaatattcagaagccccccatgcctcctgcacagtcccatcctcagccctccatgcag
acttccaccatgcctccccactcacagagcagcggatttctccagttccagtcccacgtg
cagccgcagggcctcagtccaaacgcccaggcccatgtcccggtaaatcacgggctcagc
cacagccacagccacagccacagccacagccacagcatgccgcctccgtacaagatcccc
acagaggacctcaacaaggaggacgtcatctttttctaa
DBGET
integrated database retrieval system
