Seriola lalandi dorsalis (Yellowtail amberjack): 111650329
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Entry
111650329 CDS
T06058
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
slal01001
]
111650329
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111650329
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111650329
Protein kinases [BR:
slal01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
111650329
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111650329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-RING_5
DUF3583
PRANC
Motif
Other DBs
NCBI-GeneID:
111650329
NCBI-ProteinID:
XP_023255966
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MDGRTEKQESGDAPVIIVENEAESMPVQEEKSGATGQNYLDTCPFCHLNFHSREPKLLPC
LHSFCKKCLPSPSRNLTLMEAPNSLVDSATKPLNVIRCPVCRQECMEIDVVENVFVKDSA
EAPSSTVERTVQLCMTCDDNTEASGFCVDCVEYLCATCVEAHQRVKFTKDHTIRQKTEVS
QEVHGVSTQRPMFCDIHKQEPLKLFCETCDQLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTHQLQEKKKLIEEVSNSINNGLFQVDRNRASVQNEIKKSICSLILEINKKGKMLIN
QLEAATKDHETVLRKQQEDIGYLSRHLDHVINFTKWATAKNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSSVRFQCRSSYWASNIELGSLVVESVPGHQLVGFQGIPHQLSHPGQGP
SGSPNSFAMGASHNTLAQLQMQVDKLNPQAHWQPQPPPPPWTWYQSVRLQRTVPGPLQGG
SPSHSMPPQPGRRFIVPPPNHISPTSTLPSPGFTPQSLRGMESSSNYQAKPMDIFSSSPL
YTNITPLPINGGVSSSQSRQTIEHTYLDSRNDSAGPIYMLKPNYPQSLPPSLPHRNDFHS
SLAQGQEISPGYATVSQVEEPGTVSWKPPETQQTSGAVGSAVKRRRRSSPGPIIVIKDEP
EDDSSYVQNNQRASLPDSTGEHPQISAQGEGNKVPTPLQSTDHKPTSPSKPPSRPWDQSK
IKSLGGEEQVEQNQARLGDSDEVLCAVCQSGGELLCCDKCLKVFHLTCHVPSLLKSPSRE
WFCSFCRDLFVPEMEYDCDSKPEAKTVKKEPDSEGGFPSVDKRKCERLLLHLFCSDLSSN
FQEPISPAVCANNRPTIKRPMNLSTVKKRLEAKQSLCYRGTAEFVSDIRLLFGNCAALSE
TVTEVTVAGRKLMELFEEHLRIIFSDQTFAEIKVEMIPTAPPYSQVLSLDNIPQPAKRQR
TCSDSQDAPSCPNGEEAVV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgaacagagaaacaggagtcaggggatgctcctgtcatcatcgttgagaac
gaagctgagagcatgccagtacaagaggaaaagtcaggtgcaaccggacagaattacctg
gacacttgccccttttgccatctaaactttcacagtcgagagcccaaacttctgccgtgc
ctgcactctttttgcaagaaatgtttgccttcaccctccaggaatctgaccttgatggag
gcgccaaactccctggttgacagcgcgaccaaaccactgaatgtgatccgctgtccggtc
tgcaggcaggaatgtatggagatagatgtggtggaaaacgtgtttgtgaaggactcagca
gaggctcccagcagcacagtggagaggacagtccagctctgcatgacttgtgatgacaac
actgaagcttccgggttttgtgtggactgtgttgagtacctctgtgccacatgtgtggag
gcgcatcaaagggtcaaattcaccaaggaccacacaatcagacagaagacagaagtatca
caagaagtccatggtgtgtcgactcagaggccgatgttctgcgacatccataaacaagag
ccactgaagctgttctgtgagacctgcgaccagctgacctgtcgcgactgccagctagta
aagcacaaggaccacaattaccagttccttgaagatgcttataaaaaccacaagcagcac
atggagagtatgacccatcagctgcaggagaagaagaaactgattgaagaggtgtcaaac
tccataaacaatggactgtttcaggttgatcgaaatcgtgcgtctgttcaaaatgaaata
aagaagtccatctgcagtttgattctggagataaacaaaaagggcaagatgctgattaat
caacttgaggctgcaacaaaggatcatgagaccgtcttgcgaaagcaacaggaggacatc
ggctatctatccagacacctggatcatgtcatcaacttcaccaaatgggccacagccaag
aacgggggcacggccctcttgtactgtaaacgtctgattctgtttcagattggaaacctc
ctgcgggcaaaatgcagtacctcgtttataccacagagcagtgtacgcttccaatgtcga
tcctcttattgggcctcgaatattgagctgggctctttagtggtggagagtgtaccaggc
caccagctggttggttttcagggtatccctcatcagctgtcccaccctgggcaaggaccc
tcaggctcacccaacagctttgccatgggagcttcccataatactctggctcagctccag
atgcaggtggacaagctaaacccacaggcccactggcagccgcagccacctcctccaccg
tggacatggtaccagagtgtccgactacagcgaactgtcccagggcccctgcagggaggc
tctccctcccacagtatgcccccacaaccaggccgtagattcattgtgcctcctcccaac
cacatcagcccaactagcaccttacccagccctgggtttacgccccagtctctgaggggg
atggaaagcagctccaactaccaagccaagcctatggacatattttcctcttcacctctg
tacactaatattacaccactgcccataaatggtggcgtgagttcatcccagtcacgacag
acaattgagcacacgtatctggacagcaggaacgattcagccggtccgatatatatgctg
aaaccaaactatccccagagtctgccaccttctttgccacacagaaatgattttcattcc
tctctagcgcaaggacaggagatttcaccagggtacgctactgtatcccaagtggaggaa
ccagggacggtttcctggaaacccccagaaacacaacagaccagtggagcagtgggctca
gctgtgaagagaagacgaaggtcgtcaccagggcccatcattgtcatcaaagatgagcca
gaagatgacagcagctatgtacaaaacaaccaaagagccagccttcctgacagcacaggt
gaacacccgcaaatcagtgcccaaggtgaaggcaacaaggtcccgactcctcttcaaagc
acagaccacaaacccaccagcccttccaagcctccgagcaggccatgggaccagagtaag
atcaaatcgctgggaggagaagagcaggtagaacaaaatcaagctcggctgggagactct
gatgaggtcttgtgtgctgtgtgtcagagtggaggagagctgctgtgctgcgataagtgt
ctcaaagtttttcaccttacttgccatgttccatctctcctaaaatctcccagtcgggag
tggttttgctctttctgccgtgacctgttcgtgcctgagatggagtatgactgtgacagc
aaacctgaggccaaaacagtgaagaaggagccagactctgaaggaggatttccctctgtg
gacaaacgaaagtgtgagaggctgttgctgcacttgttttgcagtgacctgagttcaaac
tttcaagagcccatatcccccgcggtatgtgctaataacaggccgactataaagaggccg
atgaatctttcaactgtgaaaaaacgactggaggctaagcagagtctgtgctaccgaggc
actgcagagtttgtatcagacatcaggctcctcttcgggaactgtgcagctctcagtgag
actgtcacagaggtcaccgtggcaggcaggaagctcatggagctgtttgaagaacacctg
aggatcatcttttctgaccaaacattcgcagaaatcaaagtggagatgatacccactgcc
ccgccttactctcaagtcttgtctcttgacaatatcccccagccagcaaagcgccagcgc
acatgttcagactcccaggatgcaccaagctgtcccaatggagaagaggcagtagtgtga
DBGET
integrated database retrieval system
