Seriola lalandi dorsalis (Yellowtail amberjack): 111650331
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Entry
111650331 CDS
T06058
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111650331
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111650331
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111650331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
111650331
NCBI-ProteinID:
XP_023255969
Ensembl:
ENSSLDG00000022904
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKELSKSSHEETVEAFRAAKDPVVVQVIRRTPSGR
PHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMEQDYY
EGTDYLSPVPADGERTEEFEYEEVELCRLNSQEKLGLTLCYRTDEEEDVAIYVSEISPNS
IAARDGRIREGDRILQINGQDVQDREEAMAALSNDESRNIVLLVARPELQLEEAWLDDEH
SEFLEQLKMEMLEEQQREEMELAALQEEQENEQRAEDDKPTCSTLPHHKDSVLTIKDRME
SSEHNVLAHIQRRLSQCLRDSRDTRCTTGSTRLEDKEDEDDDETEGDRFQQLLELKCQIR
NSGEYDLFYSRRSTIECSMGEQGGVQHELRMLNEELRSIELECQNIMQAHKLRKGQQSPS
TGRSAPSTKNQSLHRGEPTRGKLADINERLEKSDKDSSSAYNTAESSRSTPLAMDRSPEH
SLQRMVSLTNQRNLCSSLATGHSLSLSPIPACRAPVPGKSSSPDHSNPSESDQTPQAEDE
SRGTLKTHACQIPYFSPSHSSQQRQANIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSV
CKEPQRPIIEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMS
EMKMGRYWSKEERKQHLVRAKEQRKRREFMQRSRLESLRENPQSSSEGRKEVSIIELSHK
KMMKKRNKKILDNWMTIQELMTHGTKAPEGAKVNNAFLSVTTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaagcgagaggaacactacaagctgctgtatgag
attgcacaggtgaatggaaaggagttgtccaagtccagccatgaggagactgtggaggcc
tttcgcgctgccaaggaccccgtcgtggtgcaggtcatcaggcggacccccagcggccgc
ccccatggcccccctcaggaaatccatgtggtggatgtgtgcactcagaccgacatcacc
tttgaacacatcatggcgctggcaaagctgcggccttcgacccctcctgtgcctgacgtc
tgtcccttcctgctctctgacagctgtcattctcttcatacaatggagcaggattactat
gaagggacagactacctctcccctgttccagctgatggagagaggacagaggaattcgag
tatgaggaagtggaattgtgtcgactcaacagccaagagaagttggggttaactctgtgc
tacaggacagatgaagaggaggatgtggccatctatgtcagtgagatcagtcccaacagc
atcgctgccagagatggacgcatccgagagggggatcgcattttgcagattaatggccaa
gatgtacaagaccgagaagaagcaatggctgccctctccaacgacgagagtaggaacatt
gtcctgctggttgccagacctgagctgcagctggaggaggcctggctggatgatgagcac
agtgagttcctggagcagctgaagatggaaatgttggaggagcagcagagagaggagatg
gaattagctgccttgcaggaggagcaggagaatgaacagagagcagaagatgataagccc
acctgctccacactccctcatcataaggacagtgtactgactataaaagacagaatggaa
agctcagagcataacgtcctggcacacatccagagacgtctgtcccagtgcctgagagac
agtcgggacacacgctgtaccactggctccacgcggctagaggacaaagaggatgaggac
gatgatgagacggagggtgaccgtttccagcagctcttggagctgaagtgtcaaattcgt
aacagcggcgagtacgacctgttctacagccgccgtagcaccattgagtgcagcatgggg
gagcagggcggcgtacagcatgagctgcgtatgctcaacgaggagctgcgcagcatcgag
cttgaatgtcagaacatcatgcaggcccacaagcttcgtaagggccagcagtctccctca
acgggccgctctgcaccctccaccaaaaaccaaagcctccaccgtggcgagcccacaagg
ggtaagctggcagacattaatgagaggctggagaaatcggacaaggacagctccagtgcc
tataacacagcagagagttcacgcagtacccctctggcaatggaccgctccccggagcac
tcactccagagaatggtcagtctcaccaaccagaggaacctctgcagcagtcttgccact
ggtcactctcttagcctgagccccatcccagcatgccgtgctccagtcccgggcaagagc
agcagccctgaccacagcaatccttctgagtcggaccagacacctcaggctgaggacgag
agcagagggacattaaagacacatgcttgccagattccttacttctctccatcccacagt
tcccagcaaaggcaggccaacatcccagctcatgcccgccactaccagagctacatgcag
ctgatccagcagcgctcagctgtggagtacgctcagagccagctcagcctgctaagtgtg
tgcaaagagcctcagaggcccattattgagcccaagatggagtggaaggtcaagatccgc
agcgacggcacccgctacatcactaagaggcctgtgagagacaagatcctgagggagcga
gccctaaagattaaagaagagcgtagtgggggaatgaccacagacgacgatgcaatgagt
gaaatgaagatgggaaggtactggagtaaagaggaaaggaaacagcacctggtcagggca
aaagaacagagaaaaagacgggagttcatgcagcgtagtcggctggaaagcttgagggag
aatcctcaaagcagcagcgagggtcgcaaggaagtcagcattatagagctcagccacaag
aagatgatgaagaaacgcaacaagaagatcctggacaactggatgaccatccaggagctg
atgactcatggaactaaggcccctgagggagccaaggtgaacaatgccttcctatcagtc
actactgtataa
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integrated database retrieval system
