Seriola lalandi dorsalis (Yellowtail amberjack): 111650534
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Entry
111650534 CDS
T06058
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111650534
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111650534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111650534
NCBI-ProteinID:
XP_023256192
Ensembl:
ENSSLDG00000004886
UniProt:
A0A3B4WN36
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MGLKDHLEDGTGHILSLELDLDYLHVEGTERQGGLSSATAAGNIGVLQVRAGAPGNNSNS
AGSSSTSFSTHSSYSSSSSCSNFSEESAVSDSEDERLQNGSESQNPHQDQPHLHHQESSS
VCQPVRLDLTLNRSPRDPTQPETSASADPVTDCRTKVEFALKLGYPEELVLLVLKKLGAG
ALINDVLGELVKLGTKTEMEHQGGPTVSQSPSTSLTCSTSSSSSSFNSSLDSCRLLCPSQ
LLEDKENLRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQS
RPDALITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYR
DLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHRKQPCP
YGKKCTYGHKCKFYHPERGSQPQRAVADELRASAKISSVASRGLLEDALMMKSQSSGQGT
AEAEPSRGTPKKQPNPSPRSSFSDLLEDRLRVQSKVEGRRGSNSSSSSSCSSSFLGHPAP
GGPPSSGNLDPWEHPGGGGGASFRVAGASGPSQADTFHRCESPEPGYSSLVKAYSSLSLV
VPQSPECFFPADLRAGSLPSDCSSEGSVSSDSFSPDPLLDDGLKCHHHHHHPHHHHHCSG
QYNHPASRVPPGLGQYAPHGYPVPQALQRPHGFGLKSPSPPVTSHASPHPFKPPSAYIPP
HLQHPSLSGFPGEFPARPQCPPQPPPAHSHSRSSPLGRHLMGSLWQEGGLQDSRVYEGSP
LHSRRNYAGLNQQPQHQTNWEPRYQQSPKPCYDLFTFQSHPEVHEKDRHPLWGRQAHSSP
RGLSTSSLPPLPQLSLPSITPHKSHLPSLPQHQEPPALGRYQDLRERMFVNLCCIFPTDL
VRMVMARHPHVMDPQELAAAILLEKSQHGS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcctggagctggat
ctggactacctccatgtggaaggtactgagcggcagggcggtctgagctctgcgacggct
gctgggaatataggcgtcctgcaggtcagagctggtgccccgggtaacaacagtaacagt
gctgggagtagcagcactagttttagtactcattcaagctatagcagcagcagcagctgc
agcaacttctccgaggagagcgccgtgtccgacagtgaagatgaacgactccagaatggg
tctgaatctcaaaatcctcatcaagatcagcctcacctacaccaccaagagtcctcctcc
gtctgtcagccagtcaggctggacctgactctaaaccgatccccgagagaccccacacag
ccagaaacatcagcgtctgctgaccccgttacagactgccgcaccaaggtggagtttgcc
ctcaagctgggctaccccgaggagctggtgctgctggtgctgaagaaactgggcgcaggc
gcacttatcaatgacgtcctgggagagctggtcaaactgggaaccaagacagagatggag
catcaaggcggtccgacagtctcccagtctccctccacctctttgacctgctccacctcc
tcatcctcctcctccttcaactcctctctggactcctgccgcctgctgtgtccatcccag
ctgctggaggacaaagaaaaccttcgtcctgttgtggtggacgggagcaacgtagccatg
agtcatggaaataaggaagtgttctcgtgtcaaggcatccagctggctgtggactggttc
ttggagcgaggtcaccgtgacatcactgtttttgttcccgcctggagaaaggagcagtcg
cgacctgacgctctcatcacagaccaagagatcctgcggcgactagagaaggagaagatc
ctggtcttcacaccgtctcgccgcgtgcaggggcgccgcgtggtctgctacgatgaccgc
ttcatcgtcaaactggcctacgagtcggacggcatcattgtttccaacgacaactaccgt
gacctagccaatgagaagccagagtggaagaaattcattgatgagcgtctgctgatgtac
tcctttgtaaatgacaaattcatgccaccagatgacccactgggacgccatgggcccagt
ctggagaactttctgaggaagaggcctgttattcctgaacacaggaagcagccatgccca
tatgggaagaagtgcacatatggtcacaagtgcaagttttaccaccctgaaaggggcagc
cagccccagcgtgccgtggctgatgagctccgtgccagtgccaaaatttcatcagtagct
tccagaggcctgctggaagacgccctgatgatgaagagccaaagttctggtcaaggaacg
gctgaggccgagccgagtcggggaactccaaagaaacagccaaaccccagccctcgaagc
tccttcagcgacctcctggaggaccggctccgggtccagtccaaagtggaaggacgcagg
ggaagcaacagcagcagcagcagcagctgcagcagcagctttctggggcatcctgctccg
ggggggcccccttcatcgggaaacctggacccatgggagcaccccgggggaggtggtggg
gccagtttcagggttgctggagcctcgggaccaagccaggctgacactttccacagatgc
gagtctccagagccgggctacagttcgctggtgaaggcctactccagcctcagtctggtg
gtcccacagagtcctgaatgcttcttcccagccgacctgcgagctggatcgctgccgtca
gactgtagcagtgaaggcagcgtcagctccgactccttctcccctgaccctctgttagac
gatgggctcaagtgccaccatcaccaccaccatcctcatcaccatcaccactgctccggc
cagtacaaccatcctgcgagccgtgtcccccctggactgggccagtatgctcctcacggc
tatcccgttcctcaagcactgcagagaccacatggttttggcctgaaaagcccttcacct
cctgtgacctctcatgcctctccacatcctttcaaaccgccttcagcctacatccctccc
caccttcagcatccatcgctgagcggtttcccgggggaattcccagctcgcccacagtgc
ccaccccaaccgccccctgctcactcccactctcggagctctcccctgggccgccatctg
atgggttccctttggcaggaaggtggcctccaggactcccgagtgtacgaagggtcgccg
cttcattccagaagaaactacgccgggctaaaccaacaaccacagcatcagacaaactgg
gagccccgataccagcagtcccctaagccttgctacgatctgttcaccttccagagccat
ccagaagtccacgagaaggatcggcaccctctctggggcaggcaggcccactcatcaccc
cgtggcctttcaacatcaagtcttcctccgctcccgcagctttcccttccgtccatcact
ccccacaaaagccacctgccctcactgccccagcaccaggagccccccgccttgggtcga
taccaggacctcagagagaggatgtttgttaacttgtgttgcattttccctacagatctg
gtgaggatggtgatggccagacaccctcacgtgatggatcctcaggagctcgcagctgca
attttattggagaaatcgcagcacgggtcttga
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