Seriola lalandi dorsalis (Yellowtail amberjack): 111650933
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Entry
111650933 CDS
T06058
Symbol
ube4a
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111650933 (ube4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111650933 (ube4a)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111650933 (ube4a)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
U-box type E3
111650933 (ube4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
111650933
NCBI-ProteinID:
XP_023256650
Ensembl:
ENSSLDG00000016103
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MTDQGNNNQNISCNPFAALFSSLADAKQFASGQKPQQLSAEPPLEDSGESQSDSENSVSD
SVDDNDDSVAEISRSFRSRQELCEQLNVNHMIQRIFLITLDNSDPSLRGGNGIPPRCVYL
EEMAADLDGQDWLDMDNIEQALFNRLLLLEPGNHLIYMTSCSAVNLSADRDAGEKCAIPY
LFACYQRAKEEVTKVPEKLLPFAVRCKNLTVSNTRTVLLTPEIYISQNVYEQLLDLLLEG
FSGAQPEEVVEFVEEVVAGLLSDQEVRTFEEVIVPVFDIFQGRIKDLDLCQPLLYSYLDV
LLYFSHHKDIAKVLVEHIQPKDPANGLQYQKSLLGAVLSISCLLKTPGVVEGHGYFLNPS
RSSAQETKVQEANIHQFMGQFHDKLHQILKNLLQRSGETRHLLLSWLGSCLQANAGRAKI
WANQMPEISFQMYASDAFFLNLGAALLKLCQPFCRPRSPKLLTFNPTYCALKELSEEERR
NRNVHARGLDKETCLIPMPPQQPVESAQSYSLLTENLILTQLTLHLGFHRLHEQMVKMNQ
SLHRLQVTWQEAQRTGNPMSDQLREQFERLMIIYLSTKAATMQPAMLQCCLNLQASTAAL
LVQLGVGNQGPEHVALSFPLPSLQNSMLCFVPEFFAENLGDFFIFLRRFADDVLETSAES
LEQILHFITVFMGNVERMKNPHLRAKLAEVLEAVMPHMEPVASGAAQPIVFQRERVFCSY
RHAPQLAEALITVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGKDNYRESIKHLADYA
SENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVLQLERDRGEWEGLAPDARREK
ESSLQMFGQLGRFHNIMSNETIGTLAFLTSDIKGIFVHPFLAERIISMLNYFLQHLVGPK
MGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFSQTVRVLK
KINKPGDMIVAFGVLADKIKSHADRQQQEEETYADAPDEFLDPIMSTLMLDPVLLPSSNV
TVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELKQQILQWLDKHKQERLQLGPSG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggcaacaacaaccagaacatctcctgcaacccctttgctgccctcttc
agctcactggctgatgccaaacagtttgcatcaggccagaaaccacaacagctgtctgct
gaaccaccattggaggactcaggagagagccagtcagactcagaaaactctgtgtcagac
agcgtcgatgataatgacgactctgtggcagagatcagccgctctttccggtcccgccag
gagctgtgtgaacagctcaatgtcaatcacatgatccagcgaatatttctcatcactctg
gacaacagtgaccccagtttaagaggaggaaatggaatccctcctcgctgtgtgtacctg
gaggagatggctgcagatctggatggacaggactggctggatatggacaacatagaacag
gctctgtttaatcgtctgctgctactagagccagggaaccacctcatctacatgacatca
tgcagcgctgtaaacctgtctgcagaccgtgatgctggagagaaatgtgccatcccttac
ctttttgcttgttaccagagagccaaagaagaggtgacgaaggtaccagagaagttactg
ccctttgctgttcgctgtaagaatctgacggtatcaaacacacggacagttctgctcacc
ccagagatctatatcagccagaatgtctatgaacagcttctggacctgctgctggagggt
ttcagtggagcacagccagaggaggtggttgagtttgtggaggaggtcgttgctggcctg
ctctctgaccaggaggtgcgtaccttcgaggaggtgatagtaccagtgtttgatatcttc
cagggacgcatcaaagacttggacctctgccagcctctcctctactcctacttagatgtt
ctcctctatttcagccaccacaaagatattgccaaggtattggtggaacacattcagccc
aaagacccagctaatggtttgcagtaccagaagagcctattgggggcagtgttgagcatc
tcctgcttgttaaaaaccccaggtgtagtggagggacatggctacttcctgaacccctcc
cgctccagcgcccaagagacaaaggtccaggaggccaacatccaccagttcatgggacag
tttcacgacaagttgcaccagatcttgaaaaacttgcttcagcgatctggtgagacacgg
cacctgctgctctcgtggctgggcagctgtctgcaggctaacgctggccgagccaagata
tgggccaatcagatgccagagatctccttccagatgtatgcttcagatgcattcttttta
aacttgggtgcagctctgttgaagctgtgccagcccttctgcaggcctcgttcacccaaa
ctgctcaccttcaaccccacctactgcgccctcaaagagctgagtgaagaggagagacgc
aatcgcaatgtgcatgcaagaggtctcgacaaggaaacctgtctgatccctatgccccct
cagcagccggtggagtctgcacagtcctacagccttctgactgaaaacctcatcctcaca
caactcaccctgcatctcggcttccacagactccatgagcagatggtgaagatgaaccag
tccctccatcggctccaggtgacgtggcaggaggcccagcgaactgggaacccgatgtca
gaccagctccgggagcagtttgagcgtctgatgattatttatttgtcaaccaaagctgcc
acaatgcagcctgccatgctgcaatgctgccttaacctccaagcttccaccgctgctctg
ctggttcaacttggtgttggaaaccaggggcctgaacatgtagcactcagttttcccctg
ccttccctgcaaaatagtatgctgtgctttgtaccagagttttttgcagaaaacttgggg
gattttttcatctttctgcggcggtttgcagacgatgttttggagacttcagcagaaagt
ctggagcagattcttcacttcatcactgtcttcatgggtaatgtagaaaggatgaagaac
ccacacttgagagcaaaactggcagaggtcttagaggcggtgatgccacacatggagcca
gtggcttctggtgctgctcagccaatcgtgttccagcgagagagagtcttctgctcctac
agacatgcacctcagctggccgaggccctcatcactgtgtttgtagacattgaattcaca
ggtgatcctcatcagtttgaacagaaattcaactacagaagacccatgtatcccatcctc
aagtacatgtggggcaaagataactatagagagagcatcaagcatttggccgactatgca
tcagagaacctggaggccatgaacccccctctgttcctcaggttcctcaacttactgatg
aatgatgccatcttcctactagatgaggctattcagtacctgagtaaaatcaaggttctg
cagctggagcgggatagaggggagtgggagggcctggcccctgatgcccgaagagagaaa
gagtcgagcctgcagatgtttggacagctgggacgcttccacaacatcatgtctaacgaa
accatcggcacactggcctttctcacctcagatatcaaggggatctttgtgcaccccttc
ctggctgagaggatcatctccatgctgaactacttcttgcagcacctagtgggtcctaag
atgggtgcccttaaagtcaaggacttcagtgagttcgacttcaagccacagcagcttgtt
tctgacatctgcaccatctacctgaacttaggagacgaggagaatttctgtgctacagtc
ccaaaggatggacgatcatactctcctaccctcttctcccagactgttagggtactaaag
aagatcaacaagcctggtgacatgattgtagcttttggagttcttgctgataaaataaag
tcccatgcagacagacagcagcaggaagaggagacatatgcagatgctccagatgagttc
ttggatcccatcatgtccactctgatgctggatcctgttcttctcccatcttccaatgta
acagtagaccgctcaactatagcaaggcatctcctcagtgaccagacagaccctttcaac
cgcagtcctctaaccatggaccagatcaggccaaacgaggaacttaaacagcagatctta
cagtggctggataagcataagcaggagaggctgcagttgggacccagtggctag
DBGET
integrated database retrieval system
