Seriola lalandi dorsalis (Yellowtail amberjack): 111651005
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Entry
111651005 CDS
T06058
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111651005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111651005
Membrane trafficking [BR:
slal04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111651005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
Clathrin
zf-Vps39_C
TPR_Vps41
zf-RING_16
C1_2
Motif
Other DBs
NCBI-GeneID:
111651005
NCBI-ProteinID:
XP_023256733
Ensembl:
ENSSLDG00000019050
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAFKAFTQTHVYERQEAPKEKDKFSIECLECYDRNVYMGTKYATVQHLILPSSTNGDLSP
GQSKTREGRARKLGSSNPVAQLRVVPLFNHLLVLWDRSVTALNMFSLEPLPALKKIQHVS
LFEVCDSSLTAQAEYVEMVTSSSRRKVIRVHVVGVDRWEVVKEVPLLQDPVALAVDGTRL
CVATCDRYLLCDVKTGNTEELFPNSRNRQRVIVTSAGPGEFLLNGPESLGMFVMKTGICQ
RPPLQWPLEVLAAGVCFPYVLTLQPQVLSVYSMIDQQRKQTVSLHGAKGLLSTSDGVLVF
TERDIFSLSLVPFKEQIQALVGQERVEEALLLLDGVQSRCPLDSYKELQKAIACLAGFVH
FYQEGFSEARDLFIKGELDPREIIRLYPDMQSCLSEDFQSRLDRVNKGRDLQVLWQEERD
TFHHYLAFLGDFLRAVRGTEQDLKCATEVDCALLWLYTELGDSENLQQLVTFTNECSLDH
CVPVLEKHSRFFALGSLYQSHGKQTDAIKTWVKIAEGPNKDPSCPDVYGHIVWTLSQLED
RDAVWTFADWTLQRNQEIGVQIFTKRPPDDRLETQDVLVCLEKYPLALVLYLEFLIQDLS
SEEERHHNRLALAYVTQTLQEEEETDLRPTRGKLQQLLWESKFYDVSTVYERVKSTTLHT
EKAILLGKTGEHSQALQVLVHQEQDLQAAEAYCCRAAQGQDTQFRQALLLTLLQIYLGSE
DFTNTAVDLLNNNPQVFAAEKVIQLLPDSWSVQLVSQFLVGSVRETFHQRRMAMLQKALA
QAELMRHKVTWMQASKTKVGLDKEQKCKVCQRDLAEPQFACTLYGEVMHTTCAES
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaagcattcacacaaacccatgtctatgaaaggcaagaagccccaaaagaa
aaggacaaattcagcattgaatgccttgagtgctacgatcgaaatgtgtatatggggacc
aaatatgcaacagtccagcacctcatcctaccaagcagcacaaatggagatctgagtcca
ggacaaagcaaaaccagagaaggtagggcaaggaaactaggctcaagcaacccagttgcc
caactgagggtagtcccacttttcaaccatctgctggtcctctgggaccggagcgttact
gccctcaacatgttctccttagaacctcttcctgctttgaagaaaatccagcatgtgtct
ttgtttgaagtgtgcgactcatcgctcacagctcaggcagaatatgttgagatggtgact
tcctccagccgcaggaaggtgatccgggtccacgtggtgggagtggacaggtgggaggtt
gtgaaggaagtccctctgcttcaggatcctgtggccttggcagtagatggcacccgtctg
tgtgtagctacctgcgacaggtatctcctctgtgatgtcaagactgggaacacagaggag
cttttccccaacagtcgcaacaggcagcgtgttattgttacctcagcgggaccaggggaa
ttcctcctgaatgggcctgaatctttgggcatgtttgtgatgaagacagggatttgccag
cgccctcccctgcagtggcctctggaggtgctggcagccggagtatgtttcccttacgtc
ctcaccctgcagcctcaagtgttgtctgtttacagcatgatagatcagcagcgcaaacag
actgtgagtctccatggagcaaagggtctgctctccacatcagatggcgtgttagtgttc
acagagagagacattttcagcctgagtctggtgccattcaaagagcagatccaggcactt
gtaggacaagagagggtcgaggaggcattactgctgctggatggagttcaaagccgttgt
ccacttgactcatacaaggagctgcagaaggccatcgcttgcttggctggatttgttcat
ttttaccaggagggtttttccgaggccagagatctattcattaaaggtgagttggacccc
agagaaatcatccgcctctacccagacatgcagtcgtgtctcagcgaggactttcagtcc
cggcttgaccgagtgaacaagggcagggatctccaggtgctctggcaagaggaaagagac
acatttcatcattacctggccttcctgggagatttcctcagagcagtcagagggacggag
caggacctgaagtgtgctacggaggtggactgcgccctcctgtggctgtacacagaactg
ggagacagtgaaaatctgcagcagcttgtgacatttaccaacgaatgcagcctggatcat
tgtgttcctgttctggagaaacacagcagattttttgctttaggttccctgtatcaaagt
catgggaagcaaactgatgcaataaagacttgggtgaagattgcagagggccccaacaaa
gacccttcttgcccagatgtatatggccatatagtgtggactctgagtcagctggaagac
agagatgctgtgtggacatttgcagactggactctgcaaagaaaccaagagataggtgtg
cagattttcaccaagcgtccaccagatgatcgactggagacacaagatgtccttgtttgc
ttggagaagtacccactggcgctggttttgtatcttgagttcttaatccaagatttgagc
agtgaggaggagagacatcacaaccgtctggctttggcatatgttactcagactctgcaa
gaagaagaggaaacagatttgaggccgaccagagggaagcttcaacagctgctatgggaa
tccaaattctatgacgtctccactgtatacgagagagtcaagtcaacaaccctgcacaca
gagaaagccattctcctcgggaagacgggggaacactcccaggctctgcaggtgcttgtt
caccaggagcaagacctccaggctgcagaggcctactgctgcagggctgcccagggccag
gacactcagttcaggcaggccttactgctcaccctgctccaaatctacctgggctctgag
gattttaccaacactgcggtggatctgctcaacaacaaccctcaggtctttgcagctgag
aaggtcatccagctcctgcctgactcctggtctgttcaactagtatctcagttcttagtt
ggatccgtcagggagaccttccaccagagacggatggcgatgctgcaaaaggcgctggct
caggcggagctcatgaggcacaaggtcacttggatgcaggcctcaaaaacaaaggtcgga
ctggacaaggagcagaagtgtaaggtttgtcaaagagaccttgcagagccacagtttgcc
tgtaccctgtatggcgaggtgatgcacaccacctgcgctgagtcgtaa
DBGET
integrated database retrieval system
