Seriola lalandi dorsalis (Yellowtail amberjack): 111651106
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Entry
111651106 CDS
T06058
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04137
Mitophagy - animal
slal04140
Autophagy - animal
slal04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111651106 (hif1a)
04137 Mitophagy - animal
111651106 (hif1a)
04148 Efferocytosis
111651106 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111651106 (hif1a)
Transcription factors [BR:
slal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111651106 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
FAM176
Saf4_Yju2
CCD97-like_C
TMEM51
PAS_2
CDC45
SPG4
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
111651106
NCBI-ProteinID:
XP_023256826
Ensembl:
ENSSLDG00000001837
UniProt:
A0A3B4WD64
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLSTDDPMAEEETELDIQLNSSYLKALEGFLMVLSEDGDIIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLVHRTGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDTHTEQTTNGLKEPPVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYEPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KPVKEEQQQQQMQQQEEEEKEEEEEEEEEEEEEKAAVQNSMPDMSPTLLKEEEEKTPELD
VIKLFTQAGEARPLASLYDQLKEEPEALTLLAPAAGDTIISLDFSCPDSEIQLPKEVPLY
NDVMLPSSSERLALPLSPLPTSAPLHVTITTTTTSEDAKSESYAPAPSSISTSHSSSEAD
SPLDFCFPMDSDMSADFKLDLVEKLFAIDTEPKTPFTTQAMEDLDLEMLAPYIPMDDDFQ
LRSLTQEEPLSCGPVKSLKSSPVHVTQDVSSYPSSPFSTPGSRTASPAPPEPVNAPHLAT
ILAKRTPQLDKEVSLRTLAAQNAQRKRKLGDLMEIIGQGSLPEEQVEQGKKLKASESGTT
RTILLLPSDLASRLLGSTSEGTNTLFTLPQLTRYDCEVNAPLQGRQYLLQGEELLRALDH
VN
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgagctcggagcggaggaaggagaag
tccagggatgcagcgcgatgtcggcgtgggaaggagtcggaagtgttctacgagctggcc
cagcagctgcccctgccccacagtgtcagctccagcctggataaggcctccatcatgagg
ctcaccatcagctacctgcgcatgaggaagctgctcagcactgatgacccaatggcagag
gaggaaacagagctggatatccagctaaacagctcctaccttaaggccttggaaggcttt
ctcatggtgctgtctgaagacggagatataatctatctctctgagaatgtcaacaagtgc
ctcgggctggcacagtttgacctgactggacacagcgtgtttgatttcacacatccctgt
gaccaggaggagctgagggagatgttggtccacagaacaggctccaaaaagaccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgtactctgacaagcaggggccga
actgtcaatgtcaagtcagcaacttggaaggttctccactgctcaggtcacgtgcgtgtt
tatgacacccacactgagcagactaccaacgggctcaaggagccacctgtcccttacctg
gttttgatctgtgaccccatcccacacccctccaacattgaggtccctctggacaccaag
acctttctcagccgccacacaatggacatgaagttcacgtattgtgacgagaggatcact
gagctcatgggttatgagccagaggacctgttgaatcgttctgtgtatgagtactatcac
gctctggactctgaccatcttaccaagactcaccataacttgttcgcaaagggccaggtc
agcacaggacaataccggatgttggccaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaacttt
gtgctcagcggcatccaggaggagaaactgatcttgtctctggagcagactgaggatgtg
aagccagtgaaggaggagcagcagcagcagcagatgcagcagcaggaggaagaggaaaag
gaggaggaggaggaggaggaggaggaggaggaagaagagaaagctgcagttcagaacagc
atgcctgacatgtctccaaccctgctgaaggaggaggaggagaagactccagagctggat
gtgatcaaactgttcacccaggcgggagaggcccggccgctggctagcctgtatgaccag
ctgaaggaagagcctgaggccctcaccctgctggccccggcagccggagacacaatcatt
tccctggacttcagctgccctgattcagaaatccagctaccaaaggaggtccctctctat
aatgatgtaatgctaccctcctccagtgagaggctggctctgcccctttcaccgctgccg
accagcgcgcctctccatgtcaccatcaccaccaccaccacctctgaggatgcaaaatct
gagagctatgctccagctccgtccagtatatcgaccagccacagctcctcagaggctgac
agtccattggacttttgtttccccatggactcagatatgagcgcagacttcaagctagac
ttggtggagaagctgtttgccatcgatacggagcccaagacccccttcaccacacaggct
atggaggacttagatctggaaatgttagctccctacattcccatggatgatgacttccag
ctgcgcagtctgacccaagaagagcctctgtcttgtggaccagtcaaatccctcaagagc
tctccagtccatgtcacacaagatgtcagcagctatcccagctccccattcagcacacca
ggcagtcgcacagcttccccggcaccacctgagcctgtaaacgcccctcatcttgccacc
atccttgctaagaggacaccgcagttggacaaagaagtttcactcaggaccttggcagct
cagaacgcacagcgcaaaagaaaactgggtgacttaatggagattattggacagggaagt
ttgcctgaggaacaagtggaacagggcaaaaagctgaaggcctctgagtcaggaacaacc
aggaccatacttctgctgccttcagatttggcaagtcgactgcttggcagcacatcagag
ggcaccaatactctctttaccctgccacagctcacccgctacgactgcgaggtcaacgcc
cccttgcaaggccgtcagtacctgctgcagggggaggagctgctgcgcgcactggaccac
gtcaactga
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integrated database retrieval system
