Seriola lalandi dorsalis (Yellowtail amberjack): 111651244
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Entry
111651244 CDS
T06058
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111651244 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slal03400
]
111651244 (xrcc5)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
111651244 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
Motif
Other DBs
NCBI-GeneID:
111651244
NCBI-ProteinID:
XP_023256982
Ensembl:
ENSSLDG00000007353
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFIQRQVFAETKDELALVLFGTD
STKNPLARDGQYQNITVHRNIMMPDFDLLEEIENQIQPESQQVDWLDALVVCMDLLQTAT
SGKKYDRLNIALLTDLSTQASSDQLDVIIDNLKRAGITLQFFLPFPVEEDEEDGGDANGR
GHSHPGTGKGLSGEQRQGLDMMKHMLLSLDEEDGLDQIYTFRNAIEQLCMFKRIERRPMA
WPCQLTIGSSLSIRVVGYKAVTEEKLKKMWITVEAQTTMKEDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQSMVHRHQFMGSQVIKLFA
ARDDEHAGVALSAVIRALDELKMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
TEDLRQFTFPSLENNKKLTPSDTQLSAVDSLIDSMMLVEEDENGEQKDMFKVHHIPNPAF
QRHFQCLHHRAVNPGTPLPPMEPWLKAALECPEVINERCRAPLEEMKRKFTLTEVEKKKK
LKTSAQIFGKDSEEPDAKKVKGDEEEEEEYNLADIAEGSVTSVGSVDPARDFRTLIKRKS
IPFGDACQQLTHRIEQLLSNKNTQYYMKSITCIQAFREQSVKLGNADLYNSYLQSLKRSI
PNRGLEVFWDLLIQDAITLISKDEVEGSIVSKNEANQFLIAEEKKEEVAAPPAEDTGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctaaatcagcgctggtgctgtgcatggatgtggggttctccatgtcgaac
tctgccccgggtgaagagcctccctttgaactcgccaaaaaagtcatccagaagtttatc
cagcgtcaggtttttgctgagactaaggatgaactggctttagttctttttggcaccgat
tccaccaaaaaccctctggcccgggacggccagtaccagaacatcaccgtccaccgcaac
atcatgatgcctgattttgacctactggaggaaattgagaatcagatccagccagagagt
cagcaggtggattggctggatgcgcttgttgtctgcatggatctccttcagacagcaacc
agtgggaagaagtatgatcgtctcaacattgccctcctgactgacctcagcacccaggcc
agttcagaccagctggatgttattattgacaaccttaaacgtgctggcatcaccttgcag
ttctttttgccgttccctgtggaggaggatgaggaggatggaggggatgcgaacggaagg
ggccacagtcacccagggacaggcaaaggtctgtccggggaacagaggcagggcctggac
atgatgaaacacatgttgctaagtctggatgaggaggacggtctggatcaaatttataca
ttcaggaatgcaattgagcagctgtgcatgttcaagcggattgagaggagacccatggcc
tggccctgtcagctgacgattggcagctctctgtccatacgtgttgttgggtataaagct
gtgacagaggagaagctgaagaagatgtggattacagttgaggctcaaaccaccatgaaa
gaggacgtgaagagagagactgtctactgtctggatgatgacaacgagacagaggtgcaa
aaggatgataccattcaaggttttcgttatggaagtgacattgttcccttctccaaagtg
gatcaagagcagatgaaatacaagcatgatgggaagtgctttgctgttctgggctttacc
aaacagagcatggtacatcgtcatcagttcatgggaagtcaggtcatcaagttgtttgct
gccagggacgatgagcatgcaggagtagcactgtccgctgtcatccgggcattggatgag
ctcaaaatggtggccattgtccgttatgcgtatgaccgacgcagcaaccctcaagtcgga
gcagctttcccttgtatcaagcaggactatgagtgtctaatgtacgtccaactgcccttc
acagaagacctcagacagttcacatttccttctcttgaaaacaacaaaaagttaactcca
tcagacactcagctgtctgctgtggactctctgattgactccatgatgttggtggaggaa
gatgagaacggagaacaaaaggacatgttcaaggtccaccacattccaaaccctgccttc
cagagacacttccagtgtctgcatcatcgagcagtaaaccccggtaccccccttcccccc
atggagccgtggctgaaggctgctctagagtgccctgaggtcattaatgaacgttgccga
gctccactagaggagatgaaaaggaagtttactctaacggaagtggagaagaaaaagaag
ttgaagacaagtgctcagatttttggcaaagactctgaggagccggatgccaagaaggta
aaaggagatgaagaggaggaggaggagtataacctggctgacattgctgaaggctctgtt
acttcggtgggaagcgtggatccagcccgagacttccgcactctgatcaagaggaagagt
attccatttggagatgcctgtcagcaactgactcacaggatagagcagttgcttagcaac
aagaacacacagtactacatgaaaagcatcacctgtatccaggcttttagagagcagtcc
gttaagctgggaaatgctgatctgtacaatagctacctccagtccctgaaaaggagcatc
ccaaacagagggctggaggtcttctgggacctgcttattcaagatgccataactttgatc
agcaaggacgaggttgaaggaagcatcgtgtccaaaaacgaagctaatcagtttctgatt
gccgaggagaagaaggaagaggtggctgctccaccagcagaagacacaggagatgttgat
gacttgctggacatgatgtaa
DBGET
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