Seriola lalandi dorsalis (Yellowtail amberjack): 111651583
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Entry
111651583 CDS
T06058
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111651583 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111651583 (sf3b3)
03041 Spliceosome [BR:
slal03041
]
111651583 (sf3b3)
03036 Chromosome and associated proteins [BR:
slal03036
]
111651583 (sf3b3)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111651583 (sf3b3)
Spliceosome [BR:
slal03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111651583 (sf3b3)
Complex B
111651583 (sf3b3)
Complex C
U2 SnRNP specific factors
111651583 (sf3b3)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111651583 (sf3b3)
TFTC complex
111651583 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
111651583
NCBI-ProteinID:
XP_023257340
Ensembl:
ENSSLDG00000017532
UniProt:
A0A3B4XZR5
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQCTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFTNTG
DDWYVLVGVARDMILNPRSVAGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacatcacgctgcagcgtgccactggcatcacccatgccatccatgga
aacttttcaggaaccaagatgcaggagattgttgtttctaggggaaagatcttggaatta
ttgcggccagatgccaacacaggaaaggtgcacactctgctcacagtggaggtgtttggc
attatcaggtccctgatggctttcagactcactggaggaaccaaagattacatagttgtg
ggaagtgacagcggccgtattgtcatcctggaatatcatccatcgaaaaacatgtttgag
aagattcaccaggaaacgtttggaaagagcggctgtcggcgcattgttcctggacagttc
ctggctgtggacccaaaaggcagagctgttatgataggagcaatcgagaaacagaagctg
gtttatattctgaacagagacgcagctgcgagactgaccatctcctctccactggaagcc
cataaagcgaacacactggtgtaccatgttgtcggagtcgatgttggctttgaaaatccc
atgtttgcttgcttagaaatggactatgaggaagctgacaatgacccaacaggagaagct
gctgcaaacacgcaacagacgctcaccttttacgagctggaccttggcttgaatcatgtg
gtccgcaagtacagcgaggctttggaagagcatggaaacttcctcatcactgtccctggt
ggttcagatgggcccagtggagtcctgatctgctctgaaaactacatcacttacaagaac
tttggagaccagcctgacatccgctgtcccatcccgcgacgcaggaatgatctggatgac
ccagagcgtggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc
ttcctggcacagactgagcagggagacatctttaaggttaccctggagacagatgaagaa
atggtcacagaaatcaggctgaagtattttgacacaatccctgtggcaacagccatgtgt
gtcctgaagaccggcttcctgtttgtgtcgtcagagtttggaaaccattacctctaccag
atcgctcacttaggtgacgacgacgacgaacctgagttctcatctgcaatgccattggaa
gagggagacaccttctttttccagccccgccccctcaaaaacctagtgctggtggatgag
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagacaca
cctcagctgtatgtggcctgtggacgaggtccaaggtcaactctaagggtccttcggcac
ggactcgaggtttcagagatggctgtgtctgagctgcccggtaaccccaacgctgtgtgg
acagtacgcagacacgtggaagatgagtttgacgcctacatcatcgtgtctttcgtcaac
gctactctggttctgtccattggggagactgtagaggaagtgacagattctggatttctg
ggaacaacgcccactctctcctgctccctgctgggtgaagatgccttggtgcaagtgtac
ccagacggcatccgccacatcagagcagacaagcgtgtgaacgagtggaagactcctggt
aaaaaaacaattgtccgctgcgctgtgaaccagcggcaggtggtgatcgcactcactgga
ggagagctggtctactttgagatggacccgtccggccagctgaatgagtacacagagcgg
aaagagatgtctgcagatgtggtttgcatgagcctggctaacgtcccacctggtgagcaa
cgctctcgattcctggctgttggactggttgacaacactgtccgaatcatctccctggac
ccttcggactgcctgcagccgctgagtatgcaggccctgccagcccagccagagagtctg
tgtatcgtagagatgggaggcgttgaaaaacaggatgaacttggagaaaagggaaccatc
ggattcctctacctcaacattggacttcagaatggtgtgctgctcaggactgtgttggac
ccagtaaccggtgacctgtcggatacaagaacacgctacttggggtcacgacctgtcaag
ctcttcagagtcaggatgcagggacaggaagctgtgctggcaatgtccagtcgttcctgg
ctcagctactcgtaccagtctcgcttccatctgacccctctgtcatatgagactctggag
tacgcctctggctttgcctctgagcaatgcccagaaggtatagtggccatctccaccaac
acattgagaatcttggctttggagaagttaggggctgtcttcaaccaggtggcctttcct
ctgcagtgcaccccaagaaaatttgttatccacccggagaccaacaacctcattttgatt
gagactgaccacaatgcctacaccgaggcgaccaaagctcagcgaaagcagcagatggct
gaggagatggtggaggctgctggcgaggatgaaagagaactggccgctgaaatggccgct
gccttcctcaacgagaatctcccagaagccatctttggtgcacctaaagctggagccggg
cagtgggcctcactggtgcgtctggtcaaccccatacagggttcaacattggaccaggtg
caactggaacagaacgaagctgcgttcagtgtggccgtgtgtcgtttcaccaacacagga
gacgattggtatgttctggtgggtgttgccagggacatgattctcaaccccagatcagtg
gctggtggctttatctacacctataggctgattggtggaggggagaagctggagtttgtt
cacaagaccccggtggaggacgtgcctttggccattgctccattccagggacgaatcctg
gtgggggttgggaaactgctgagaatctatgacctgggcaaaaagaagctgcttcgcaaa
tgtgaaaataagcacgtacccaacctggtgactggtatccataccatcggccagcgtgta
attgtgacagacgtccaggagagtctgttctgggttcgttatcgacgtaacgagaaccag
ctcatcatctttgctgacgacacatatccacgctgggtgacaacggcctgtctgctcgac
tatgacaccatggcctccgctgacaagttcgggaacatcagcattgtgcgtcttcccccc
aacaccagtgatgatgtggatgaagaccccacaggcaacaaagctttatgggacagaggc
ctccttaatggagcgtcacagaaggctgaggtcataatgaactaccacgtaggagagaca
gtgttatctctccagaaaaccactctgattcctggaggttcagagtccttggtctacacc
acactgtctggaggcatcggcatactggtcccattcacatcacatgaggatcatgacttt
ttccagcatttagagatgcacatgcgctctgaattccctccactgtgcggtagagaccat
ctcagctttagatcctactacttcccggttaagaatgtgattgatggagatctgtgcgag
cagtttaacagtatggaccctcacaagcagaagagtgtggcagaagagctggacagaacg
ccaccagaggtctctaagaaactggaggatattcgcactcgctacgctttctaa
DBGET
integrated database retrieval system
