Seriola lalandi dorsalis (Yellowtail amberjack): 111651610
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Entry
111651610 CDS
T06058
Symbol
soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slal03036
]
111651610 (soga1)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111651610 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
Rsa3
Motif
Other DBs
NCBI-GeneID:
111651610
NCBI-ProteinID:
XP_023257373
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MTKTKEVDVHNSPTHLFFASPKERRLHLRQKMESGGGTEGSDSGQTQHAVPGQQQQNPRP
ETAELSAVLSAHPPGEKKKINRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGAIHLGS
RISRRSPVGSLAGKDGKAEKSGGGKPAGKSSFSAAALSKTSAAKAAKSTGGRRKVSDASI
GSDDLSKDSGCAPGKLSPTDSSSELSDCASEENKLSTDAVSSDTESRSSRGGGPDGDKPL
RDGTMSDRVNQQAAAKTTCSSAEKDKDRLSLGVETGEGSISPGEERSVTSFDSRVPASTS
LAFSDLTEEFMDGMQEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYMEEDVYQLQE
LRQQLEQANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHSQ
LDSVEKKRTRLEKENEELRVRLQDLEVAKQVLQQEIDKNSQKKRGARPNNKPDKKLGPQE
DSSDLKCQLHFAKEESALMCKKLTKLVKDSEAMKEELAKYRSLYGDVDATLTVEEVADSP
HTREAEIRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKGPQDGPQELSGVGGGLG
VGLGLSGGAMVLGGGASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYK
SELPPLTSTLSSNSLTSLTDGLLNDSPVHSIQEAAVLISTDTPAQEEELRLARLQIGELS
GKVKKLQYENRVLLSNLQRCDLASYHAPSSSSSSSSLRLALETDAEAGDSAECLPTSPPH
RKEPVGGENDGPEIKERKKKIEDNADMATSLPGCLGQKDHDALLAMRDQARLVSTAIQLL
TSPESNCLSSPPSIYHKVCSNDAAEPCDLEKPQAHSQISELSDLADRPLVGALTSRLQAL
HTQLQAFVERVDGLGKPPAGGRDPQVEGASPLPSPCASLICSRDEQNGLNAAEEKQPDYR
DHTEPEVKGQTEENSQSDSNEPEKQASSEQEQQEKETDEASPSRSSERLQARLSEAEESA
DGAQEELETERETTLKLTQIQDEHQKALLRRDFQLQSLGLQARLQRKLWSQERTLLVQES
QHLKQALLLLSLKLRCFLKQWRLGCKKDTEWKDVLEMNSLKDLYLLLEEDNLTSPAHQTD
KRSAADEQPLSPTIKSSAVSSTLADLKVALQDLSGELRQERQGSQELTQQFAKAKASWEV
ERTELQSLITQLETKAGKAAAALSSTDAPDPPDLKVALKREREEHQHLLAESYAAVMDLT
KQLQIGERNWGREKLELLERFSQERAQWEQRLREATVQQGKSKSSGGESSTDTVVANGAG
SPSTKSMSELDRPTVNGAADQEEKIQFAVPPLLIRPELSDLTRKNWTYLTNETPEVGDTC
KTWDGPSGSCNSLVGSELDLESVQRSHTAPDRTGIRIYYSPPAVRRIEHRRQNQHAREPQ
QAQNGSSSLGPSVWDRGVAVEETLGVQQQQQPSSSSSSSSFSSSYEQWLSSLSKQHRELL
ESRSSCVAGSIPGGLGGSANSVVDGMTSSSAFHGLEIGEISANLSDDMKEMTNCVRQAIR
SSSLERKSSKEPGSQAVGMSTRSTQTAAQYVSIGLQTDNLSGSRGAGLHSKAWSPRPSST
TTSSLVSARTRQISTSLDKVHSRIERPCCSPKYGSPKLQRRVSSGSTSRLDSTSSSRDRS
LWSLQQRPLGGGGGSAWARSTTTRDSPVLSGLTDGLSSLFSVVEHAGSTESLWRGDGGAS
QGASPARQPPAAGKPSGAAACGSDAGSQRYGGLVQEFFRNVCSGRGPGGVTLPGERAQRD
SLGSLGVLGGLSGVDEPKPECISAGVGGLGLGAGNDNVTRIVNKRFMRQTAGEEMVSIMG
GGKETLSSVGVVAAAAVAAASGTEDAPCDCTAQSSCFARPSRAAARHSLGQCKHRPQESP
VATEEKRDACNE
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaagaggttgatgtccataactctccgactcacctcttcttcgcctcg
cccaaggaacggagactccatctccggcagaagatggaaagcggaggcgggacggagggc
tcggacagcgggcagacgcagcacgcggtgcccgggcagcagcagcaaaacccccggccg
gaaactgcggagctctctgcggtgctgtccgctcatcctccgggggagaagaagaagata
aaccgggctccgtccccggccagaccgaaggatgttcccgggtggtcgctcacaaagatc
cgcggagggatcgggacgccgaccctgagcgtcaagccgggagccatccacctgggtagc
cgcatttccaggcgcagccccgtgggaagtctcgccggaaaggacgggaaagcggagaag
agcggtggtggtaaaccggcgggtaaatcctctttctccgccgccgcgttgtccaagact
tcggcggccaaggcggctaaaagcaccggagggcggaggaaggtgtcggacgccagtata
ggatccgacgatttgtccaaggactcgggctgcgccccggggaagctctccccgaccgac
agcagctccgagctgtcggactgcgcctccgaggaaaacaagctctccacggacgctgtg
agcagcgacaccgagtcgaggagcagccgaggcggcgggccggacggagacaagccgctc
agggatggcaccatgtcggacagagttaaccaacaagcagccgccaagaccacctgctcc
tctgcggagaaagacaaggaccggctctccctcggtgtggagaccggggaagggagcata
tccccgggcgaggagcgctcggtcacctcgtttgacagcagggtgccagcaagcacatct
ctggctttctcagacctcacggaggagtttatggacggcatgcaagaggagtttgtcagg
gaaatagaagagctgagatcggagaatgattacctcaaagatgagatggaggagctgagg
tctgagatgctggagatgagggacatgtacatggaagaagacgtttaccagctgcaggag
ctgcggcaacagctggagcaggcaaacaagacctgccgcatcctgcagtaccggctcagg
aaggcagagcggcgctctctccgcgtggcccagacggggcaggtggacggagaactgata
cgaacgctggagcaagacgtcaaagtggcgaaggacgtgtccatccgtctccacagccag
ctggacagcgtggagaagaagaggactcgtctggagaaggagaacgaggagctgagggtc
cgactgcaggacctggaggtcgccaaacaggtcctgcagcaggagatcgacaagaactcc
cagaagaaaagaggagcacgacccaacaacaaacctgacaagaagctcggtccgcaggag
gacagttcagacctgaagtgtcagctccactttgccaaagaggaatcagccctgatgtgc
aagaagctgaccaagctggtgaaggacagcgaggccatgaaggaggagctggccaagtac
aggtcgctgtacggagacgtcgacgccacgctcaccgtggaggaggttgcggactccccc
cacacccgcgaggcggagatcagagtccacctgaagctggtggaggaggaggccaacctg
ctgagtcgacgcatcgtggagctggaggtggagaacagggggctccgagccgagatggac
gacatgaaggggccgcaagatggacctcaggaactctctggtgttggcggcggtctgggg
gtgggtcttggtctctcaggaggagccatggttcttggaggaggggcttcgtctgaaaac
gtcatggagctccagagacacctccagtttgtggaggaggaggcggagcttctgaggagg
tctctgatcgagatggaggagcagaacaaactcctgatgaacgagatcaaccgctacaaa
tccgaactcccgccgctgacgtccacgctgtcgtccaattcgttaacgtctctgacggac
gggctgctcaacgacagccctgtgcactccatacaggaagcggcggtgctcatcagcacg
gacacccccgcccaggaggaggagctcaggctggcgaggcttcagatcggagaactgagc
gggaaggtgaagaagctgcagtacgagaaccgggtgcttctgtccaacctgcagcgctgt
gacctggcctcctaccatgctccttcctcctcatcctcctcctcctcgctgcgactggct
ctggagacggatgcagaggcgggagactccgctgagtgcctccccaccagccctcctcac
cgcaaagagcccgtgggcggcgagaacgacggcccggagatcaaggaacggaaaaagaag
attgaggacaacgctgacatggcaacttcgcttcctgggtgcctggggcagaaggaccat
gatgccttgctggccatgagggaccaggctcgcttggtttccacggcgatacagctcctg
acctcccccgagtccaactgcctctcctcgcccccatccatctatcacaaggtctgcagc
aacgacgcagcggagccgtgtgacctggagaaacctcaggctcacagtcagatttcagaa
ctgtctgacttggccgaccggcctctggtcggagctctgaccagcaggcttcaggcactg
cacacccagctgcaggccttcgtggagcgggtggacggcctgggtaaacccccggcaggt
gggagggaccctcaggtggaaggagcatctcccctgccctcaccctgcgcctccctcatc
tgctccagagacgagcagaatggactgaacgctgcagaggagaagcagcctgattatagg
gaccacacagagccagaggtgaaaggtcaaactgaagagaacagccaatcagacagcaat
gagccagaaaagcaggcaagcagcgagcaggagcagcaggagaaggagacggatgaagca
tcgccctcccggtccagtgagcggctccaggcccggctgtccgaggcagaggagtctgct
gacggagctcaggaggagctggagacggagagagaaaccactctcaaactcacacagatc
caggacgagcaccagaaggctctgctccgtcgggacttccagctgcagagtttgggtctc
caggctcggctgcagcggaagttatggagccaggagaggactctgctggtccaggagtct
cagcacctcaaacaggccctgttactgctcagcctcaagctgcgctgcttcctcaaacag
tggaggctgggctgcaagaaggacacggagtggaaggatgtcttggagatgaacagcctg
aaggatctctacctgctgctggaggaggacaacctgacaagccccgcccaccagactgac
aagaggtctgctgcagacgaacagccgctcagcccgactatcaagtcgagcgctgtgagc
agcactttggccgacctgaaggtggcgctgcaggatctgagcggtgagctgcgacaggag
agacaaggctcccaggaactcacccagcagtttgcaaaggccaaggcatcatgggaagtg
gagaggaccgagctgcagagcctcatcacgcagcttgagaccaaagcaggtaaagcagct
gcagctctgtcctctactgacgcaccggatcctccagacctgaaggtggcgctgaagagg
gagcgtgaagaacaccagcacctcctggctgagtcctatgctgctgtgatggacctcact
aaacagcttcagatcggagagaggaactggggcagagagaagctggagctgctggagagg
ttcagccaggagagagcgcagtgggagcagagactgagagaggccactgtacaacagggg
aagtcgaagtcatcaggcggcgagtcatccacggacacggttgttgccaatggagctggt
tcgccaagcaccaagtccatgtcagagctggatcggcccacggtcaatggagccgctgac
caggaggagaaaatccagtttgcagtcccgcctcttctgattcgtccagagctcagtgac
ctcaccaggaagaactggacctacctgaccaatgagactccagaggtcggggacacctgt
aaaacctgggacggtcccagtggctcctgtaacagcctggtgggatcagagctggatctg
gagtctgtccagaggagccacaccgctccagaccgcaccggcatccggatctactacagc
cctcctgccgtgagacgcatagagcaccggagacagaaccagcacgccagagagccacag
caggcgcagaacgggagctcgtccctggggccgagcgtctgggacaggggcgtggctgtg
gaggaaaccctcggggttcagcagcagcaacaaccgtcttcctcctcctcctcctcctcc
ttctcgtcctcgtacgagcagtggctgagctcgctgtccaagcagcacagggagctgctg
gagagcaggagcagctgcgtcgctggctcgatccccggcggcctcggtggctcagcgaac
agcgtggtcgacgggatgacgtcctcttcggctttccatggcctggagatcggggagatt
tctgccaacttaagtgacgacatgaaggagatgaccaactgtgtccgtcaggccattcgc
tcctcgtctctggagaggaagtccagcaaggaaccaggaagtcaggcggttggcatgtcc
acgaggtccacgcagaccgccgcccagtacgtcagcatcgggcttcaaaccgacaacctt
tccggcagcaggggggcggggctacactccaaagcctggtctcctcgtccctcgtctacg
accacctcctcgctggtgtcggcccgaacccggcagatatctacgtcgctggataaagtt
cacagccgcatcgagagaccgtgctgttcgcccaagtacggctcaccaaaactgcagcgc
agagtttcctctggctccacctccagactggacagcacctcctcctccagagaccgcagc
ctgtggagcctccagcagagacccctgggcggcggcggcggctcagcctgggctcgctcc
accaccaccagggacagccccgtcctcagcggcctcaccgacggcctctccagcctcttc
agcgtggtggagcacgccgggagcacagagtcgctctggaggggggacggaggagccagc
caaggtgccagtccagcacgccagccccccgccgcaggaaaaccctctggggcggcggcc
tgtggatctgacgccggctctcagcggtacggaggcctggtccaggagttcttcaggaac
gtgtgcagcggccgtggcccaggaggagtcaccctgcccggggagagagcgcaaagagac
tccctgggcagcctgggtgtcctgggggggctcagcggtgtggatgagcccaagccagag
tgcatctcagccggggtcggagggctcggattgggtgcaggcaacgacaacgtgaccagg
attgttaacaagaggttcatgaggcagacggccggggaggagatggtcagcatcatggga
ggagggaaggaaacactgagcagcgttggggtggtggcggcggcggcggtggcggcggca
tctgggacggaggatgcaccatgtgactgcactgcccagtcttcctgctttgcccgacca
tcaagagcagcagctcgccattcgctgggacaatgcaagcaccgcccacaagagtctccg
gtggcaaccgaggagaagagggacgcctgcaacgagtga
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integrated database retrieval system
