Seriola lalandi dorsalis (Yellowtail amberjack): 111651639
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Entry
111651639 CDS
T06058
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111651639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111651639
03021 Transcription machinery [BR:
slal03021
]
111651639
03036 Chromosome and associated proteins [BR:
slal03036
]
111651639
Transcription factors [BR:
slal03000
]
Eukaryotic type
Helix-turn-helix
ARID
111651639
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111651639
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111651639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111651639
NCBI-ProteinID:
XP_023257403
Ensembl:
ENSSLDG00000022221
LinkDB
All DBs
Position
Unknown
AA seq
2334 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPELNSGKSGGGGGGGTVQRTGPMLGAGDGTLNNVDH
HRRNELNMVHSTSTTHNAPDGHDKDGNNLTSASASTNSTTSSMETGLIANHKLKCVGSGD
SPQSQPLPQQQQPPQFGQFAPHQQRQIQSNNTANNNGQGPRGDRGMDHQHHGGKENLLGG
HGEPQQQHMPGKGEGDLTCKPAERMTSTRYEHSNLGPTTNNSEFNNNYYTPRPCYEQHGG
QQQQSGGMGITHSSAHNSMENSHEAGFHNSQYNQYPAYRAGYGGGAYGMMGPSGCRQPGN
MMMGSNSSTSHGKSPLGAGSGGFQRFPGQTQQQQHPSGATPTLNQLLTSPSPMMRGYGGA
YQDYSGPTAQQQAGMGLGKDVGAQYGAASAHVWGGQQRNHPHSMSPGNGGPGLGRTQVSS
MDFMALKRSQLYGMANNPYSTPQQPGGGPYPSSQPYTSPPPHRYPMSIQGRGQLGMGGMQ
YPQQQQVAPYGQQGMGGYSQQQQQQQQQQQQTGQQGTPPYFSPPQQTPPGPTQSPYLQPR
PPPQQEAQQENYSARGPAPGNSGKANNEDGVSQDRPSSLPDLSGSIDDLPTGTDVGLGSA
VSAGGSSSSSSSSQGEQGGASNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQS
RSGSGPISPASGPSANTAVPGSTMAPQNSGNGPDGSHPPITRSPMAQERGFMSNMQRNQA
SSQFASPQSGPSMSPHPSPGGPLYPGMGPYSQSGPTGPYGPQGSQYGHQGNYPRPSNYSG
TASTSYSGPGPGLTNSLGMNASSPMHGQGPGQPIPVGRSHGPGNQNRVYPPMAPSSPSMP
QPAGPGMGPPSLGSSNRKAQEAAAAGMPGSANSTHNRRSPYVRSPAQMQPPQPTSTHWPS
PHPASTRPPPSPPLRPHHPSILPPSHSQHHRQGSYQGPGISQASTTVPYSQPTGNNSSAI
GNAQGPAYNMPPSGAMGMSGDSMMSPDGKPKTDVKDDTGPTNEPHKPKLQDGYSNNNSSS
GSQQCVSQPATPGGALPVPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPSSPKANPNPS
SLSGERITRLYELGVEPERRGWVERYLNFMEERGTPVAQLPAVGKKPLDLWKLYMAVREI
GGLAMVNKNKKWRELSTTLKVGTSSSSASSLKKQYIQYLFAYECKMERGEEPPADSSSSS
SSSSMAGGDNRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLG
QVTPLPPNRSSVSIQDPFSEVSDPAFQKRATSLPPSAPYQQGLSMPDMMMRMQYDAKDPF
AGMRKMAGADPYMPGQMPGGGMQDMYGRPPSALSMSQRSQYPYGPGYDRRPDHVMGMEGS
MGPPGSQNNLGPSNSEGSMYSPSRYPSQQRHDGYGQQYPGMPYGMHPSGMYPQQQQGYKR
PMDGMYGPPPKRHESDMYAMQYANQQPEMYNHYGGGYSGPEHRAIQGQFPYPYPRDRMAP
SGQSQHSMMGGGPTPNHAADGPNMWPSRTDLGYPYPNRQGPPSQMPPYGSIGRDDMDGRP
GQEQWHRQSPYMSSSAGMPPLSSRQPSSFSNSPSMANHLPRAPSPGAFQRSLDSRMSPSK
VPFMSPMKMPKPGMAMMGSQISGSMGQFPPNLRRDLNYPPGSVEATMSILKPRRKLTSKD
TGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRC
LIEIFGILEEFEVGTVAHKSFLDPASKQKEESIPDQETDSTVQPESESAPAAAELQEEQA
GAVMEEAPPVAAAPESAVVNGEKEESETSGKKEDKNKEDGEKEEKEEKSEEGAESKKESM
DQPVAELQPKPQQASKYDKLPIKIIHKEDLIEDMTEHLGYVTEFTSGLLHWQAGGGDSTA
HIQTHFEPRTAPPARAYEKIGKENKQENKMEVEKKQPLKHITATIDDVLCARVDALSYAH
PARSLPSYPFRVHSDGEQDHITLLEDEPRCLDEAPLSTTSSWQDSLSKRCLCVSNIVRSL
SFIPGNDSDMSRHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQQEQGLSSSKEEWWWE
CLSLLRENAMVTLANISGQLDLSNYSDTICLPILDGLLHWMVCPSAEAQDPFPSAAPHSQ
LTPQRLVLECLCKLSIQEGNVDLLLATPPFSRQEKLFTVLVRYVGQRKAQVYREMAVAVL
SHLAQGDPTAARAIAMQKGSVGNLVGFLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMM
CRAAKGLLAMAKVEENKTEFVLYESRLLDISISSVLSAGVVAIICQVLFHLGKL
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtttgggtccggagctcaattcggggaaatccggaggaggcggaggaggagggacc
gtacagcgaactggaccgatgctgggtgccggagatgggactctgaataatgtagaccat
caccgccgaaacgagctcaacatggtccattcaacttccacgactcacaacgctccggac
ggccacgacaaggatgggaataaccttacgtccgcctcggcgtcgactaattcaaccact
tcctcgatggaaacgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagat
tcccctcagtcccaaccgctgcctcagcagcagcagccgccgcaattcggccaatttgcg
ccacatcagcagcgacagatccaaagtaataacaccgccaataacaacggccaggggcct
cggggggacaggggtatggatcaccaacaccacggaggcaaagagaacctgttggggggg
cacggggagccacagcagcagcacatgccagggaaaggtgagggggacctcacctgtaaa
cccgcggagaggatgacgagtaccaggtacgaacattctaacttggggccaactactaac
aactcagagtttaataacaactattatactccaaggccctgttatgagcaacatggcgga
cagcagcaacaaagcggtgggatggggataacgcactcctcggcgcataacagcatggag
aactcccacgaagcggggttccacaacagccagtacaaccaatacccggcgtaccgggcg
ggctacggcggcggggcctacgggatgatgggcccctctggatgccggcaaccagggaac
atgatgatgggcagcaactcctcaacaagccacggcaagtctccactgggagctggttcg
ggtggctttcagaggttcccgggacaaactcagcagcaacagcatccttcaggggccacc
ccgaccctcaaccagctgctgacgtcccccagccccatgatgcggggttatggcggtgcc
tatcaagactacagtggccccacggcgcagcagcaagccggtatgggcctggggaaagat
gtgggggcccagtacggagcagcctcggctcacgtctggggaggacagcagagaaaccac
cctcactcaatgagcccgggaaacggagggccaggcctcggcaggacgcaggtgtcctcc
atggacttcatggctttgaagcgttcgcagctgtacggcatggcgaacaatccctactcc
actccacagcagccagggggtggtccttacccctctagccagccatacacgtcgcctcct
ccgcaccgatatccaatgagcattcaagggaggggccaactgggcatgggcggaatgcag
taccctcaacagcagcaggtggcgccgtatggccagcaggggatggggggctacagccag
cagcagcagcaacagcagcagcagcagcagcagacggggcagcagggaacccctccgtac
ttcagcccccctcagcagacccctccaggcccaacccagagtccctacctacagccgcga
ccaccaccacaacaggaggcccagcaggagaactacagcgccaggggtcctgctccaggg
aattctgggaaggccaacaacgaagatggcgtctcccaggatcgcccttccagtctgccg
gatctgtccggctcgattgatgacctccccacagggacggatgttggtctgggctcagcc
gtcagtgccggtggctcctccagcagcagcagtagtagccagggggagcagggaggcgcc
agtaaccagggacagtcccccttctccccacacgcctccccacatctccccagccagcgg
agcggcccctctccctcccctgttggctcgcctgcaggctccactcagtcccagcagtcc
cgatctggctctggacccatctctcctgccagcggaccctctgccaacaccgccgtacca
ggttccaccatggccccacagaactctggcaacggaccagatggatcccacccaccaatc
acccgctcacctatggctcaggagagagggttcatgtctaacatgcagaggaaccaggcc
agctcccagtttgcttctcctcagtccggaccctccatgtccccacacccttcacctggg
ggcccattgtatccagggatgggtccttactcccagagcggccccacaggcccttatgga
cctcaaggatctcagtatggacaccaaggtaactaccctcggccctctaactacagcggg
acggccagcaccagctacagcggccccggccccggcctgaccaacagtctgggaatgaat
gcgagcagccctatgcacggccagggccccggccagcccatacctgtaggacgtagccat
ggtccaggtaaccagaacagggtgtacccacctatggctcccagctcccccagcatgcct
cagccagctgggccagggatgggccctccttctttgggtagctcaaaccgcaaggcccag
gaggcagcagcagctggcatgccaggatctgccaactcaacacacaataggcggtctccg
tatgtaaggtccccagcacagatgcagccaccccaacccacctccacccactggccttca
cctcaccctgcctccacccgtccaccaccttcacctcctctcagacctcaccacccatcc
atcctgccaccctcacattcacaacaccataggcagggcagctatcaaggccctggcatc
agccaggcaagcaccactgtcccctacagccagccaacaggcaacaacagctcagccatc
ggtaacgcacaaggtccagcctacaatatgccgccgtcaggagccatgggaatgtccgga
gacagcatgatgagtccagatgggaaacccaaaacagacgtaaaagatgacacaggcccc
accaacgagcctcacaaaccaaagctacaggacggctacagcaacaataacagtagcagt
ggctcccagcagtgtgtgtcccagccagccacgccaggtggtgccctgcccgtaccctcc
cccctctcacccagcccagccagcctgtcctcctaccacggagacgacagcgacagcatc
agcagccccccttggcctctcaagaccccctccagccccaaagccaaccctaacccctcc
tccctcagcggggagcgaatcacacgcctttatgagcttggtgtggagccggagcggcgg
ggctgggtggagcgatacctgaacttcatggaggagaggggcacgcctgttgcccagctg
cccgctgtgggcaaaaagccactggatctctggaagctttacatggcagttcgggagatc
ggaggcctcgccatggtgaacaagaacaagaagtggcgtgagctgtccaccaccctgaaa
gttggcacgtcaagcagctccgccagctccctcaagaagcagtacatccagtatctgttt
gcctatgagtgtaagatggagagaggagaagagccgccggcagacagcagcagcagcagc
agcagcagcagcatggctggaggggacaacagaaagcaggtcaagatccagccgccctca
cctgctaattcaggcggctccctccaaggcccacagacgccccagtcctctggcagcagc
tctacagcagaggcagcaggggatctgaaaccccccacacctgctaccacccctctggga
caggtcactccactgccccctaacaggagtagtgtgagcatacaggaccccttctcggag
gtgagtgacccggccttccagaagcgtgccacctccctgcccccctcagctccttaccag
cagggcctcagcatgcctgacatgatgatgaggatgcagtacgacgccaaggaccccttc
gccgggatgaggaagatggcaggagctgatccctacatgccgggccagatgcctggtggt
ggtatgcaagacatgtatggtcgacccccatctgccctgagcatgagccaaaggtcacag
tatccgtacgggccaggctatgacaggagaccagaccatgtgatggggatggaggggagc
atgggtccccctgggagtcagaacaacctggggccctccaacagtgaaggcagcatgtac
tctcccagcagatacccttcacagcagagacacgatggctacggtcagcagtatcccggc
atgccatatgggatgcatccttctgggatgtaccctcaacagcagcagggctacaaacgg
cccatggacggtatgtatggccccccacccaagagacacgagagtgacatgtatgccatg
cagtacgccaaccagcagccggaaatgtacaaccactacggtggtgggtactcaggccct
gaacacagagccatacagggacagttcccctacccctacccccgtgaccgtatggccccc
tcaggacagagccagcacagtatgatgggtggggggcccactcctaaccacgctgccgat
gggcccaacatgtggccatccaggacagacctcggctatccttaccccaaccgacaggga
ccgccgtctcaaatgccgccttacggctcaattggtagagatgacatggacgggcggccc
gggcaggagcagtggcaccgtcagtccccctacatgtcatcatcagccggcatgcctccc
ctatcttcacgccagccatcgtctttttccaactccccatccatggccaaccacctgccc
agagcacccagcccaggggccttccagcgctccctggactctcggatgtcacccagcaaa
gtaccgttcatgtcacccatgaagatgcctaagcctgggatggccatgatgggctcacag
atcagtggatccatgggtcagtttcctcccaacctgaggagggacctcaactacccgcca
ggatcagtggaggccaccatgtccatcctcaagcctcgacgcaaacttacctccaaggac
actggaacgcctgaggcctggcgcgtcatgatgtctctgaagtctggcctgctggcagag
agcacatgggctctagacaccatcaacatcctgctgtacgatgacagcactgtggcctcc
tttaacctctcccagttgcctggattcctcgagctgatcgtcgagtacttccgccgctgt
ctgatcgagatctttggcatcttggaggagtttgaggtggggactgtggctcataaaagc
tttttggatcctgcttctaaacagaaagaagaatccatccctgaccaggaaactgattcg
actgtccaacctgaatcagagtcagcccccgcagcagcagagctgcaagaggagcaagca
ggagccgtcatggaggaagctccacccgtcgctgctgcaccagagtcggcagttgtgaat
ggtgaaaaggaggagtctgagacgagtggaaagaaggaggacaagaataaagaagatgga
gagaaagaggagaaggaagaaaagagtgaagaaggagcagagagtaaaaaggagtctatg
gaccaacctgttgcagaactacagcctaaacctcaacaagccagcaaatacgataagctc
ccaatcaagatcatccacaaagaggacctgattgaagacatgacagagcacttaggttac
gtcaccgagttcaccagtgggctgctacactggcaggccggtggaggcgactccaccgca
cacattcagacacactttgaaccacgcactgcgccacctgccagggcttatgagaagatc
ggaaaggagaacaaacaggaaaacaagatggaggtggaaaagaaacaacctctgaaacat
atcaccgctactatagatgatgttttgtgtgctcgggttgacgccctctcttacgctcac
cccgcacgctccttgccatcctacccattcagggtgcattcagatggggagcaggaccac
atcaccttgctggaggatgagccccgctgcctggatgaggctccgctctccacaacatcc
tcctggcaggactcgctgtccaagcgatgcctctgtgtctccaacatcgtccggagcctg
tctttcatcccggggaacgactcggatatgtcacgccaccctgctctggttcttcttctg
ggcaggctgctcctgctgcaccaccagcacccggagaggaacaggtcgccccctagctac
cagagagacgaacagcaggagcaggggctgtcgagtagcaaagaggagtggtggtgggag
tgtctgagtctgctcagggagaatgccatggtcacactggccaacatctctggccagctg
gatctctccaactattcagacactatctgcctccccatcctggatggccttctccactgg
atggtgtgcccttcagctgaggcccaggaccccttcccgtcagcagcaccccactcccag
ctcactcctcaaaggctggtgctggagtgcctctgcaagctgagcatccaagaaggcaac
gtggacctcctgctagctacgcctcctttcagccgacaggagaaactcttcactgtcctg
gtccgttacgtgggtcagaggaaggcccaggtgtacagggagatggcagtggctgtcctc
tcccacctggcgcagggagaccccacagcggcacgcgccattgccatgcagaagggcagc
gtgggtaatttggtaggtttcttggaggacggtgttagcatggcgcagtaccagcagaac
cctcacagcttactgcacatggggcatccccctatggacccaccgagcataaacatgatg
tgcagagcagctaaaggcctgctggccatggctaaagtggaggagaacaagacagagttt
gtgctgtacgaaagcagattattagacatctccatttcttcggtgctcagcgcgggagtg
gtggctattatttgccaagttctctttcacttagggaaattatga
DBGET
integrated database retrieval system
