Seriola lalandi dorsalis (Yellowtail amberjack): 111652334
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Entry
111652334 CDS
T06058
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111652334 (scaf4)
03041 Spliceosome [BR:
slal03041
]
111652334 (scaf4)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111652334 (scaf4)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
111652334 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111652334
NCBI-ProteinID:
XP_023258341
Ensembl:
ENSSLDG00000021671
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MDAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSAAAPYTGTEEPGSSPPPAKEPVTAVTANSTMTSAAQLQNS
DAFAAVAQLFQSSQGQQLQQMLQNFQQQPVKPDANTQPHLHTTQTHIQNITTGLSMVTPQ
PPPATQLTQPTQPTQQKTAFDKVTKLLDRFDYDDEPEVGEETKKDDITSQPSFMQQPPAF
PQHVEHFKPPMMNMSQDLSQQVPLPPNGQLQAYGLPPGQNFPVMIPPMGHALPGQALPGS
TGPPGFPGVYPPHNAAQLQQDLSMDMDRSAMRDGRHGRRSHSGSRSPKRRRSRSNSRTRR
SRHRRSRSRSRDRRHHSPRSRSQERREREKERERRQKGLPPPKSETLSICSTTLWVGQLD
KRTQQQDVACLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSYKVNQKAIK
IAWALNKGIKAEFKQYWDVELGVTYVPWSKIREDQLEELKDGGILDVDTLSPEWSGVRKT
LDHPEELNHNGRSEPQQPEETQVLPLAAAAAPPAQVPPMQQPMVGVGSLQPPVFPGPIGM
PPPSFPPGVPPPPFIRPGFNPMQMPPGFPPPGAMPLGPPPPAKVGVEEPPLDPTGLGNRK
NDEVPEGPNIFNNQMAPMGNQVGVPPGAPPGALSGIPPGVPPGGPPGALPGGPPGNIQPS
SGGLLGARPGIIPLQRPPVPPLPHMQRFPPPHVTRPPHPNMPPMPPQMMPRGPHPQMMHH
EPPQPKGGFGMPPPHNMRAPFPPHGHGPPPQGPPPPFIRPGGPRGLEGPEEMDGRPFRGD
RPGFRDREPDRDRDWDRDRDRDRDRGFGGGRRPFGDGGRGGGGDRMDGRDRLGGWQEDGG
NHRGGGWERDRDRDRDRDRDRDRDRDRDRDRDRRDWRERRSSLDSDRERGRGDDGEREHG
RGEGGERGRAEGGSRERGRGAEGKEGERPRRSERRERTTRWDRDDRLAELENMDKFRTSN
STEQPCVTPVVTVETSKEPSVEDSQQKAKSELVAPAPEVTTAAGEPMPSEPSPPAQSAPT
DTKQEAAS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtcaacgccttcaaccaggagttattctcattgatggactccaagcccccg
atctctcgggcaaagatgatctccatcaccaaatcagccatcaaagctatgaaactctac
aaacatgtggtccagattgtggaaaagtttatcaagaagtgcaagcctgagtacaaggta
gcaggcctgtatgtggtggattccattgttaggcagtccagacaccagtttggaccggac
aaggacgtgtttggcccaaggtttaccaaaaacattacagggacttttgagaacctctgc
ctttgccccgtagaggacaggagtaagattgtgcgggtcttgaacctgtggcagaagaat
ggggtgttcaagatcgaggttattcagcccctcttggacatggcagctggctctagcagt
gctgctgcaccctatacgggcacagaagagccaggttcctctccacctccagccaaagag
ccagttaccgcagtaacggcaaattccaccatgacatctgctgctcagctgcaaaactct
gatgcctttgctgcagtggcacagctcttccagtcctcacagggtcaacagctgcagcag
atgctccagaactttcagcagcagccagtgaagcccgacgccaacactcagcctcatctc
catacgacccaaacccacatccaaaacatcaccactgggctgagcatggtcaccccacaa
cctcccccagccacccaactcactcagcccactcagcccacccagcagaagacagccttt
gacaaggtgacgaaactgctggaccgttttgattatgatgatgaaccagaagttggagaa
gaaacaaagaaggatgacatcacttcacagccctcctttatgcagcagcctccagccttc
ccacagcacgtggagcactttaaaccaccaatgatgaacatgtcgcaagacctctcacaa
caggttcctctccctcctaatggccagctccaagcctatggtttaccaccagggcaaaac
ttcccagttatgatacctcctatggggcacgctctgccagggcaggccctccctggttcc
actgggcctccaggcttcccaggcgtataccctccccacaacgcagcccagctacaacag
gatttgtcaatggatatggaccgttcagctatgagggacggcagacatggtcgaaggtca
cactcaggctccaggtctccgaaacggaggaggtcacggtctaattcccgtacacggcgg
tccaggcacaggagatcccgctcgcgctccagagaccggcgtcatcattccccgcgctct
cgctcgcaggagcgcagggagcgagagaaagagagagagcgacggcagaaaggcctccca
ccacccaagagcgagacactgagcatttgcagtaccactctgtgggtgggccagctggac
aaaagaacacaacagcaggatgttgcctgtttactggaggagtttgggcagatagaatcc
atcaatatgatccctccacgtgggtgcgcctatattgtcatgatacataggcaagatgcc
ttcagggctctacagaagcttagtagaggatcttacaaagttaaccagaaagccatcaag
attgcttgggctttgaacaagggcataaaggctgagtttaaacagtattgggacgtggag
ctgggtgtcacctacgtaccttggtctaaaatcagagaagaccagttggaggagctaaaa
gacggaggaatactggatgttgacaccttatcaccagagtggagtggagtgaggaagact
ctagaccacccagaggaactcaaccacaacggccggtcagagccacagcagccggaggag
acgcaggtattacctctggctgctgcagctgctcctcctgcacaggtccctccaatgcag
cagccaatggttggtgtgggttctctgcagcctcctgtctttcctggtcccataggaatg
cctccgccttccttcccaccaggtgtcccacctcctcctttcatcagacctggcttcaac
cccatgcagatgcctccagggttccctcccccaggtgccatgcctctaggccccccacct
cccgccaaagttggagttgaggaaccacccctggacccaacagggctgggcaaccggaaa
aatgacgaggtccccgaaggtcccaacatcttcaacaaccagatggcacctatgggcaac
caagtaggtgtacctccaggtgcaccaccaggtgctctctctggtatacctccaggtgta
cctccaggtggacctccaggtgctcttccgggcggtcctccaggaaacatccagccctcc
tctggtggtctgcttggtgctcggcctggtataatcccgctccagcgtcctcctgttccc
ccactaccacacatgcagcgtttccctccaccccatgtgacaagacctcctcaccccaac
atgccccctatgcccccacagatgatgcccaggggaccacaccctcaaatgatgcaccac
gagccccctcaacctaaaggaggctttgggatgccccctccccacaatatgagggctccg
ttccctccacatgggcatggccctcctcctcaaggtcctccacctccttttatcagacca
ggtggtcctcgtggcctggaagggcccgaagaaatggatggcagaccattcaggggagac
agacctggtttcagggaccgagagccagacagggacagagactgggatcgggacagggat
agagacagggatagaggttttggaggtggaaggcgtccctttggtgatggagggagagga
ggaggtggtgatagaatggatgggagggacaggctcggaggctggcaggaagacggcggc
aatcaccgtggaggaggatgggagagagacagagacagggacagagatcgggaccgggac
cgagaccgagaccgggaccgggaccgggacagagacagacgtgactggagggagaggcga
agcagtctggatagcgacagggaacgagggaggggcgatgatggggaaagggagcatggg
aggggggagggaggagaaagaggaagggcagagggagggagtcgagaaagagggagagga
gctgaaggaaaagaaggggagcggccacggcggtcagaacggcgagagaggaccacgcgg
tgggacagggatgatcgactggccgaattggaaaacatggacaaatttcggacctctaac
agcaccgagcaaccttgtgtgactcctgtggttaccgtggaaaccagtaaagaaccgagt
gtggaagattctcaacaaaaggcaaaatcagaacttgtagctccggccccagaggtaact
actgctgcaggagagccaatgccttctgagccctcacctccagctcaaagtgcacccaca
gacacaaaacaggaagcagcatcatag
DBGET
integrated database retrieval system
