Seriola lalandi dorsalis (Yellowtail amberjack): 111652542
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Entry
111652542 CDS
T06058
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slal03400
]
111652542 (spg11)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111652542 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
111652542
NCBI-ProteinID:
XP_023258590
LinkDB
All DBs
Position
Unknown
AA seq
2381 aa
AA seq
DB search
HLRRESDAIAVAVIPENQHCGEIADILKAQLAPGGSLLGCLRGRGRLVVWDPADREAPPA
AVDGCCRDFSWEEVPVHSQGVGSFRLLAVGSQCDLKLLEVEAERSASVSLLCVSECPADR
LLQTVREQDHSVSELQSLRVLSFTAGRCCVLLNADWLLQLQWQQVEEELQILSCCSLQLT
DSNRHTAVHHCVCRETLFTLSSTGLISVCDITDGRLLASVDLPVYLSSGPAEDDVVSSFS
SPSVSSSSSFCHLQVSADLSTAVAVTESHTAVGVDLNHYFRMFPDHLLCAAPPARPPLRP
QNLRDQDSVSSSGCSLAALGSTFSVDRSWEARLASMYSRAQQTPGSSTSCSSSSSQRART
SWFSSLPHLESHQAPSSAHSRVPCGGATVTFSVPESSVPSLLTVSEFSALLNFVSPGNEQ
TTVASWDLESGSVSYHQAEGAAAPVQRCGERQHRLLLKKAGVFQVLFSVSQQDLLSSLML
FGSAATVDAVCHLNSWGRCSIPIHALQAGLKNRQLDTVDFYLKSKENVLNPSTGFSAADQ
PAASTLTDSVQELCPALDLLCSAVRDSNSEAQSRQFSEQLLNITMNFVNTQIRSVLTNAR
NEDAGVRSCVDVLDRYITELRSYMKRFPWPAGGDTSSIDSAAPAQEEAQEDEWEQLPTEE
VVRQSILTNQIPRAQAVLRRRSRPEQRLSALRMEGLRQVFSRLQQRDLQTASTLLTNMGF
SVKKQLHSFSLYTDDKDLREFVVEELSRRSYFPEEEMQSVAFIREMERLGSLPASRRPGS
PTAHRLVQMSHRETGAGEEVLEELVGQRRSDQEGGLWRNLRLDWVRNWDQNCQTAVLLSR
LQHSELSSCDSAVLWRYLTALHDQRRVVSWIQNQETSDASLWPELAPEVVNSNTLCSSYM
REKILDLLARRGLFIPEELADLEQLLWRLAQGGGVMASAPPVPQYRSSLGLDLHGLFITF
CLEHGLQYLLYTYLEHYRLTPRNCPLLTNQSLSESQPWFEMLVKIQEITRDLSDPALVFQ
ASLTSAQVLLPGSQASLSSLLLEGHSLLALAAIMFVPGGIDQVVAQGERSGRSERTVDPQ
LLKMALAPHSKLKAALFPAGPRGHSPSSDVSVYHLLQSLHPLDPSRLFGWQVANSLNSTE
TSELPHFSSPHLVNKFALVENLDFLYYLRHGRPSFAYATFLVQQLSGCSDVTPLVQHTWQ
QVYRLALQCFNVPAVASAAVCFCELLGVCSLKLRVDIRAMNTVLQHQNLHNTHSAPTQHL
HSLVSKAVKLAEAEPGAAEELIGYLEAAVTDSLEQKGISRSSYEAAQEWALPVQFCQLHG
LKLSSVYPAHCASDGQFIHFLLFVQLHNFPPQQVRSLVAQFSPALQAHLSLAFQDLQVYS
QRRSCGSEEQEQALSSETAPGCPEHPRELFQVLLQSQEEAAPCRYLLQVSLMQRCPTLAV
LAACQQGAELLPSLCVWVLTSVDDVTAGEATSHLVVAPQHHDWTLHDLSIIWRTLLGRGR
IRPLLRGFELFQRDCPLVLVLRMFELCCDHRNFSEAKAKLLDFQRTLITLKNGGPVPSDG
LPLQWVESQASVLLLTMLQRCSSQYDLHRLLQLLTDVDKLLKSSGPDFRKLSQLSQLLQG
SEVSLSPRLLQCTSPSVQQEEFQAAVDALQAEGRYSQARQVALLAGLPVHRLLLSQLLQE
VNAQKSKTQWRRLETRVSFWKKCQEQLKTDGTDPESASSFFLSQSEAGTTDSSPAGGEAQ
AELLDVQERCLLLGLAAHWLSLVDPAPVDKLESLEKTLWVSRVRRHVLTVAMEKESVFNL
PPPAVTPEMNTYEMLMKEFSFSNISALNSEKCLSLEGLPGPSEEQQEPDIDSGLSPEERR
VLAALIGQLLDDGSIHEAGRICRYFSTYHRDMWVVLRCRGLASGDLNPEPQEEAADAPPR
RSMTSSASFSSLSFVMLPLPEDEVAVQLQQLVDQCRHGNNYCKQVLSLYQLSKELQTSFG
EICRKEPRCVLEMLLLSDQPERFRKAQAFIRAQGLTADAVAELVSSAVVQALLASAQELQ
PEKQVFRPAEGRDSLIQLIKLCDDPNLVGIKLLENLNAVPLRDLSCIVELLIVAHDCFSL
TCNMEGIVRVLQAARHLSHTYLAPGEHYSLLVRLLTGIGRYNEMTYVFDLLHQNHRFEML
LRKKMDTDRQQSSSLKTALLDYIKRCLPADSEKHNMVALCFSMRREIGENHEMAARTQLK
IIESQAWVVTPDLKSSLVKVLGLLKDAAESFSKPVCDHTRYASGGEVSCSVCQVFVVSEA
YGYSPDWAEILYQRVILKGDFVYLEELKQQRPLTCSLFEDVFNKLDGAPSSATPNVKRLL
THCDDVYSRYRLAYQQNLYDVTKTMLQDAKTSNYLNDRLAS
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
catctgcggcgggagagtgacgccatagcggtggctgtgatcccggagaaccagcactgt
ggagagatagcggacatcctcaaggctcagctcgctcccggaggctccctgctcggctgt
ctccggggccggggccggctggtggtgtgggacccggcggacagagaggctcctccggcc
gcggtggacggctgctgcagagatttttcctgggaggaagtgcccgtccacagtcaaggc
gtcggcagcttcagactcctggccgttggatctcagtgtgacctgaagctgctggaggtg
gaggccgaacgatcggcctccgtttctctgctgtgtgtctctgagtgtcctgcagaccgg
ctgctgcagaccgtcagagagcaggaccacagtgtgagtgagctgcagtcgctgcgtgtg
ttgtcgttcactgctggccgctgctgcgtgctgctgaacgctgattggctgctgcagctg
cagtggcagcaggtggaggaggagctgcagatattatcctgctgcagcctccagctgact
gacagcaacagacacacagctgtccaccactgtgtctgcagagaaaccctgttcaccctc
agctccaccggactcatatctgtgtgtgacatcactgacggcaggctgctggccagcgtg
gacctccctgtctacctgagctctggaccggcagaggacgacgttgtctcctccttttct
tcgccctccgtctcctcatcttcctccttctgccacctccaggtgtcagctgatctcagc
acagctgtagccgtcaccgagtctcacactgctgtgggcgtcgacctcaaccactacttc
aggatgttcccagaccacctgctctgtgccgccccccctgctcgcccccccctccggccc
cagaacctaagagaccaggacagcgtgtcgagctccggctgcagcctcgccgccctcgga
tcgaccttcagtgtcgaccgctcatgggaagctcgtctggcctccatgtacagcagagcc
cagcagactccaggctcctccacctcctgctcctcctcctcctcacagcgtgccaggaca
tcctggttctcctccctcccccacctggagtcccaccaggctccgtcctcggcccacagc
agagtcccttgcggcggggcgactgtcactttctccgtccccgagtcgtccgttccatct
ctgctcacggtctccgagttctctgccctcctgaacttcgtctcccctggcaacgaacag
accacagtggcgtcgtgggatttggagtccgggagcgtgagctaccaccaggcggagggc
gcggcggctccggttcagcgctgtggagagaggcagcacaggctgctgctgaagaaggcc
ggtgtgttccaggtcttgttctcggtttcccagcaggacttgctcagcagcttgatgttg
ttcggcagcgcggcgacagtggacgcagtgtgtcacctgaacagctgggggcgctgctcc
atccccatccacgccctgcaggccggactgaagaaccggcagctggacacggtggatttc
tacctgaagagcaaagaaaacgtcctgaacccgtcgacagggttcagtgctgccgatcag
ccggcagcctccactctcacagacagtgtccaggagctgtgtccagcgttggacctgctg
tgttcagccgtcagagactcgaacagtgaagctcagagccgacagttctcagagcagctg
ctcaacatcaccatgaacttcgtcaacacacagatccgctctgtgctgaccaacgcacgc
aatgaggatgcaggcgtgcggagctgcgtggacgttctggatcggtacatcaccgaactg
aggagctacatgaagaggtttccctggcctgcagggggcgacacctccagcatcgactct
gctgctcctgctcaggaggaggcgcaggaggacgagtgggagcagctgcccaccgaggaa
gtggtccgccaatccatcctgaccaatcagatccccagagctcaggccgtcctgaggagg
cggagccgcccggagcagcgtctgtcggctctgaggatggagggtctgcggcaggtgttc
tcccgcctgcagcagcgagacctgcagaccgccagcaccctgctcaccaacatgggtttc
agtgtgaagaagcagctgcacagtttcagtctttacaccgatgacaaggacctcagggag
tttgtggtggaggagctgtcgaggcggagttatttccccgaggaggagatgcagagtgtg
gccttcataagggagatggagaggctgggatcgctgcctgcgtcccgccgcccaggaagt
cccacagcgcacaggctcgttcagatgtctcacagggagacgggagctggtgaggaggtg
ctagaggagctggtgggacagaggaggtctgaccaggagggggggctctggaggaacctc
agattggactgggtgaggaactgggaccagaactgccagaccgccgtcctcctgtctaga
ctgcagcactcagagctgagctcctgtgactctgcggtgttgtggcgttacctgaccgcc
ctccacgaccagcgccgggtggtcagctggatccagaaccaggagaccagcgacgcctcc
ctgtggccggagttagccccagaggtggtcaacagcaacacgctctgcagctcctacatg
agggagaagatcctggacctgctggccaggagaggcctgttcatccccgaggagctggca
gacctggagcagctgctgtggaggctggctcagggcggaggggtgatggcttcagctcct
cccgtccctcagtaccgctcctccctcggcctcgacctccacggcctcttcatcaccttc
tgtctggagcacggcctccagtacctgctctacacctacctggagcactacagactgacg
cccaggaactgccccctcctgaccaatcagagcctgtcagagagtcagccctggtttgag
atgctggtgaagattcaggagatcaccagagacctgtcagacccggcactggtcttccag
gccagtctaaccagcgctcaggtgctgttgccaggcagccaggcgtcgctcagcagtctg
ctgttagagggtcacagtctcctcgctctggctgccatcatgttcgtccccggaggaatc
gaccaggtggtggctcagggtgaacggtcaggaaggtcagagcggaccgtcgaccctcag
ctcctgaagatggcgctggccccccactccaagctgaaggccgccctgttccccgccggg
ccccgaggacacagcccttcctccgacgtctccgtctaccacctcctgcagtcgctccac
cctctggacccgtccaggctgttcggctggcaggtggcaaactccctcaactccacagag
acgtcggagctgcctcatttctccagccctcacctggtcaacaagttcgctctggtggag
aacctggacttcctgtactacctccgtcacggccgaccatccttcgcctacgccaccttc
cttgtccagcagctgagtggctgcagtgacgtgacgccgctcgtgcagcacacctggcag
caggtgtacagattggccctgcagtgcttcaacgtgccggcggtggcgtctgcggccgtt
tgtttctgcgagctgctgggagtctgtagcctgaagctgagagtcgacatcagagccatg
aacaccgtcctgcagcaccagaacctccacaacacacactctgccccgacacaacatcta
cactctctggtatctaaagcagtgaagctggcagaggcggagcctggagcagcggaggag
ctgattggctacctggaggctgcagtgacagacagtctggagcagaagggcatcagcagg
tcgtcctacgaggcagctcaggagtgggcgttgcctgttcagttctgtcagctccacggt
ctgaagctcagctctgtttaccccgcccactgcgccagtgacggacagttcatccacttc
ctgttgtttgtccaactgcacaacttcccgccccagcaggtgaggtcactggtggctcag
ttcagccccgccctccaggcccacctgagtctggcgttccaggacctgcaggtgtacagt
cagaggaggagctgtggctccgaggagcaggagcaggctctgagctcagagacggccccc
gggtgtccggagcaccccagggagctgttccaggtcctcctgcagagccaggaggaggcg
gcaccctgcaggtacctgctgcaggtatctctgatgcagcgctgcccgaccctggctgtg
ctcgccgcctgtcaacagggggcggagctgctgccctccctgtgtgtgtgggtgttgacc
tccgtcgatgacgtcacagcgggggaagccacctcccacctggtggtagccccccagcac
cacgactggacgctgcacgacctgtcaatcatctggaggacgctgctggggcggggccgc
atcaggcccctcctacgaggcttcgagctcttccagagggactgccctctggtgttggtg
ctcaggatgtttgagctgtgctgtgaccacaggaacttctccgaggccaaagccaagctg
ctggacttccagaggacgctcatcactttaaagaacggcggtccggttccctccgacggc
ctccccctgcagtgggtggagagccaggcgtccgtgctgctcctcaccatgctgcagcgc
tgctcctcccagtacgacctccaccgcctcctgcagctcctgaccgacgtcgacaagctc
ctcaaatccagcggtccagacttcaggaagctgagtcagctcagtcagctgctgcagggg
tcagaggtcagcctgtctcccaggctgctgcagtgcacgtctccctccgtccagcaggag
gagttccaggcggctgtggacgctctgcaggccgaaggccgctacagccaggccaggcag
gtcgctctgctggccggcctccccgtccaccgcctgctgctgagccagctccttcaggaa
gtgaacgcccagaagtccaagactcagtggaggaggctggagacccgcgtcagtttctgg
aagaaatgtcaggagcagctgaagacggacggcactgatccagaatcagcctccagcttc
ttcctgtctcagtctgaagccgggaccacagactcctcccccgccggaggagaggctcag
gcggagctgctggacgtccaggagcgctgcctgctgctgggcctcgccgctcactggctc
tccctggtcgacccggctcccgtggacaaactggagagcctggagaaaacgctgtgggtg
agccgggtccgacgacacgtcctcaccgtcgccatggagaaggagagcgtcttcaacctg
ccgccgcccgccgtcacacctgaaatgaacacgtacgagatgctgatgaaggagttctcc
ttctccaacatatcagctctgaactcagagaagtgcctcagtctggagggactcccgggt
ccctcagaggagcagcaggagccggatatcgactccgggttgagtccagaggagaggcgc
gttctggccgcgctgatcggtcagttactggatgacggcagcatccatgaagccggccgt
atctgccgttatttctcaacgtatcaccgggacatgtgggtggtgctgcgctgcagaggc
ctcgcgtccggagacctgaaccccgaaccgcaggaagaggctgcagacgctccgccgagg
aggagcatgaccagctccgcctcttttagcagcctgtcgttcgtcatgctccccctcccc
gaagacgaggtggctgtccagctccagcaactggtggatcagtgtcgccacggcaacaac
tactgtaaacaagtcctcagcctctaccagctctccaaggagctgcagacctccttcggc
gagatctgcaggaaggagccgcgctgcgtgctggagatgctgctgctgtcggatcagccc
gagcgcttcaggaaggctcaggccttcatcagggcgcagggtctcaccgcagacgccgtg
gccgagctggtgtcctccgccgtggtccaggctctgctggcctccgcccaggagctgcag
cctgagaagcaggtgttcaggccggcggaggggcgggactctctgatccagctgatcaaa
ctgtgcgacgacccgaacctggtgggaatcaaactgctggaaaacctcaacgccgtccca
ctgagagacctgagctgcatcgtggagctgctgatcgtggctcacgactgtttcagtctc
acctgtaacatggagggaatcgtcagggtgctccaggccgcccgccacctcagccacacc
tacctcgccccaggagagcactacagcctgctggtgcgtctgctgacaggtattggcagg
tacaatgagatgacgtacgtcttcgacctgctgcatcagaaccatcgctttgagatgctg
ctgaggaagaagatggacacagacagacagcagagctccagtctgaagacggctctgctg
gattacatcaaacgctgcctccccgcagacagcgagaaacacaacatggtggcgctgtgt
ttcagcatgaggagggagatcggggagaaccacgagatggctgctcgcactcagctgaag
atcatcgagtctcaggcctgggtcgtcacccccgacctgaagagctcgctggtcaaggtg
ttgggtctgctgaaggacgccgccgagagcttctccaagcccgtgtgtgatcatacacgt
tatgcctcaggaggtgaagtcagctgttctgtgtgtcaggtgttcgtggtgtcggaggcg
tacggctacagtccagactgggctgagattctgtaccagcgggtgatcctgaagggagac
ttcgtttacctggaggagctcaaacagcagcgcccgctcacctgcagcctgttcgaggac
gtcttcaacaagctggacggcgctcccagcagcgccactcccaacgtgaagcggctgctg
acgcactgcgacgacgtgtacagccgctacaggctggcctaccagcagaacctgtacgac
gtcaccaagaccatgctgcaggacgccaagacctccaactacctgaacgacagactggcc
agctga
DBGET
integrated database retrieval system
