Seriola lalandi dorsalis (Yellowtail amberjack): 111652567
Help
Entry
111652567 CDS
T06058
Symbol
ercc3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
slal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111652567 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
111652567 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111652567 (ercc3)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111652567 (ercc3)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111652567 (ercc3)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111652567 (ercc3)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111652567 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
111652567
NCBI-ProteinID:
XP_023258628
Ensembl:
ENSSLDG00000008744
UniProt:
A0A3B4X0M2
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MVMKINLTFLKEFAYLKVCKMGKRDKGDREKRPKKRFYEEEDDEEEVVGGESQEAIPAAA
GKQVDESSTKLDEYGAKDYRVQMLLKNDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVA
IAEPVCRPNHIHEYKLTAYSLYAAVSVGLQTSDIVEYLQKLSKTSVPDGIVQFIKLCTVS
YGKVKLVLKHNRYFVESAFPDVIQRLLQDNVIRECRLRTADGADTELITEVIHSKSAISK
SGQEKGGTSTSQQPSEGQTSTQQVPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEEL
QKRCIQLEYPLLAEYDFRNDTVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVL
PCGAGKSLVGVTAACTVRKRCLVLGNSSVSVEQWKAQFKMWSTIDDSLICRFTSDAKDKP
IGCSVAISTYSMLGHTTKRSWEAERVMEWMRSQEWGLIILDEVHTIPAKMFRRVLTIVQA
HCKLGLTATLVREDDKIVDLNFLIGPKLFEANWMELQNNGYIAKVQCAEVWCPMSPEFYR
EYVAIKTKKRILLYTMNPNKFRACQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPYI
YGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRL
GRVLRAKKGMVAEEYNAYFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEED
LMFSSRDDQQQLLQKVLAASDLDAEEEVVAGEVGTRPQFSRRAGTMSSMSGADDTVYMEY
QSRSSRASALAKSVHPLFKRFRK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaagataaatctgacatttttgaaagaatttgcttatttaaaagtctgtaag
atgggtaaaagggataaaggagaccgtgagaagaggcccaaaaagcgtttctatgaggag
gaagatgatgaagaagaggtggtgggaggcgagtctcaggaggccatacctgctgctgca
gggaaacaagtggatgagtccagtacaaaactggatgagtatggagccaaagactaccgt
gttcagatgttgttaaagaatgatcactcttcacggcccctctgggtggctccagatgga
cacatttttctggaagccttctcaccagtgtataagtacgcccaggatttcttggtggcc
attgcagagccagtgtgcaggcctaaccacatccatgagtacaagctgacggcttactcc
ctgtatgcagctgtcagtgtggggctgcagacctctgatattgtggagtacctgcagaaa
ctcagcaagacatctgtacctgatggaattgtgcagttcattaagctctgcacagtgagc
tatggcaaagtcaagctggtgctcaagcacaataggtattttgttgagagtgccttccct
gatgtgatccagcgccttctgcaggacaacgtgatccgtgaatgtcgtctccgtactgca
gatggagcagacactgagcttattactgaagtcatccacagcaagtcagcgatctccaag
tctggtcaggaaaagggaggcacttccacctcacagcagcccagcgagggacaaacctca
acccagcaggtccccgaggacattttcagctactatgagcaaatggataaagaagaggag
gaggaggaggagactcagactgtgtcctttgagattcgccaggagatgattgaagaacta
cagaagcgctgtattcagctggagtaccccctcctagcagagtacgactttcgcaatgat
actgtcaacccagacatcaacatagacctgaagcccactgctgtgttgcggccctaccag
gaaaagagtctgcgcaagatgtttgggaatggacgcgctcgttccggggtcatcgtgctg
ccctgcggagctggcaaatcgctggtgggcgtgacagcggcgtgcacggtgcgtaaacgc
tgcctggtgttgggtaactcctctgtgtcagtggagcaatggaaggcccaattcaaaatg
tggtccactattgatgactctctgatctgccgcttcacctccgacgccaaggacaaaccc
atcggctgctcggtggccatcagcacctattctatgctgggtcacaccaccaagcgctcc
tgggaggctgagagggtcatggagtggatgcggagccaggagtggggactcattatcctg
gatgaggtgcacactatccctgccaagatgtttcgtcgtgttctgaccattgtccaggct
cactgcaaactggggctcactgccacgctggtcagggaagatgacaagattgtggacctc
aacttcctaattgggcctaagctgttcgaggccaactggatggaactgcagaacaatggc
tacattgccaaagtccagtgcgcagaggtgtggtgcccgatgtctcccgagttttacaga
gaatatgtggccattaagacgaagaagcgcatccttctctatactatgaaccccaataag
ttccgtgcttgccagtttctcattcgttttcatgagcggcgcaatgacaagatcattgtc
tttgctgacaacgtgtttgccttgaaggaatacgccattcgcctcaacaagccttacatc
tatggtccaacctctcagggggaacgtatgcagattttacagaactttaaacacaacccc
aagatcaacaccattttcatctccaaggttggagacacctcatttgacttgccagaagcc
aatgttttgatccagatctcttcccacggtggatcacgcagacaggaggcccagaggctt
gggagagtcttacgagccaagaaaggaatggtagcagaggagtacaatgcgtacttctat
tcactggtgtcccaggacacacaggagatggcttactccaccaagaggcagaggttcctg
gtggaccaaggatacagctttaaggtcatcacaaagttggcaggtatggaggaagaggac
ttaatgttctccagcagagatgatcaacagcagctgcttcagaaggtccttgctgcttca
gacctggatgctgaggaggaagtggtggcaggggaggtgggcacacgaccacagttctca
aggcgagcaggcaccatgagctccatgtcaggtgcagatgacactgtctacatggaatat
caaagccgaagcagcagagcctctgcgttggccaagagcgttcatccactgttcaagcgc
ttcagaaagtag
DBGET
integrated database retrieval system
