Seriola lalandi dorsalis (Yellowtail amberjack): 111652622
Help
Entry
111652622 CDS
T06058
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04270
Vascular smooth muscle contraction
slal04625
C-type lectin receptor signaling pathway
slal04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111652622 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111652622 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
111652622 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111652622 (arhgef12)
Membrane trafficking [BR:
slal04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111652622 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
HEPN_AbiU2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
111652622
NCBI-ProteinID:
XP_023258715
Ensembl:
ENSSLDG00000011746
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPQDRLSSTQPPWDENSSVCNQKVDILQKMLSKEQQELQAMKEEYSKNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFETEHTLTSKGDNSTDLSWSSTPI
SHRFGPGSPDSMCPRESSCPSPKSTPRNSFNSCHSPEAEDATDLDSLSPTTVSSPSSSRL
ISQIIGAEDDYFDSDQEQTNGQCNNFNSIEQLKSRPAHLSAFLHHVISQFDPAPVLCYLY
ADLYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISADLDRRRTELIPEEINRQHVQ
TLQDSLLPDIQKNLEDFRQKRSMGLTVAEVELAKLDQERVRDRIALERERSYAENIITKI
EDILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEK
EGEEKVKKPRFPSILGPQRRPSRIEAGPVGKALDGRPRPQKQLSQPTLGASEHMEPGRLR
GSQSSEGSELTHSMSVNSSSPNSATYSSDNSRDADTGGTLTSGPSRLSDGLQSDPLDGLS
YPASHFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNW
QQLVGREVLAVLRPHEIKRQEVINELFYTERAHVRMLRVLDHVFYQKLSKEAILPPADIK
NIFTNLEEILQLHVSILEQMAAIRKRNESSVIDQIGDDLLSWFSGGEEEKIKQAVGTFCS
NQPFALEIIKTKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMLRLTKYPLLLDNIAK
YTDNTTERDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILE
LKNLDLTKKTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGT
ADTKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQ
RADAMKVKPHSVIPLPQTDGERDSVGIITTGGSRLSRDPDRTSTGSTQSTDKESSPASRS
AMQSSLPGNNPFEKEEEEEEGFVDPELPYQVAEDGREGDSFNIFPSRADEALKTLAALKQ
VLVTQLMSQEAAEQTKRSTGARLLRTTSLRTPVDSRARVMVHNGSEKNSSQTEDPAQDLG
SGDTGFFDTPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLSTSQGCAADSGINLRFS
STSQAGSLSSFSRQVLSHLRNLQSNLNYLKEVEAKYNNLIRQRPERSAADTDGNKDKR
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccatcccccggacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgaatttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacgcttgttacacattctaatcacattgaagtggtgaagctaatcaaatcg
ggctcctatgtggccctcacagtcttggggcgccctccagggcttgcccagatccctttg
tctgaagcagagtctgaaatgttgggcgttagcatttcctctccaaactctccagcagca
gaacgcccctacagtcctcaggaccgcctctcctccacccaaccaccatgggatgagaat
agcagtgtctgcaaccagaaggttgatatcttgcaaaagatgctctcaaaagagcagcag
gagctgcaggccatgaaggaggagtacagtaagaacccctcccccaaactactgaaagac
atccaggaagctaaaaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatgtttgagacagag
cacactctcacctctaagggagacaacagtacagacctgtcctggagcagcactcctatt
tctcacagatttgggcctggatctccagacagtatgtgtccaagagagtcatcctgcccc
agcccaaagagcacacccaggaacagcttcaactcctgccactccccagaggcagaggac
gccactgacctggactccctgtcccctaccacagtcagcagtccctcttcttctcgcctc
atatcgcaaatcattggagctgaggatgactattttgattcagaccaggaacagacaaat
ggccagtgtaacaacttcaacagcattgagcagctcaagtctcgccctgcccacctctca
gccttccttcatcatgtcatctctcagtttgaccctgctcctgtgctgtgctacctctat
gctgacctctacaagcagaccaactccaaagagaccagacgggtgttcatggacctccac
accttcttcattgaccgaggagcaaatttgaaagttgctgttcctgaatccatctctgct
gatcttgaccggcgaaggacagaactgattccagaggaaataaacagacaacatgttcaa
acactgcaggattctctgctccctgacattcagaagaaccttgaggatttcaggcagaag
cgcagtatgggcctgacagtggctgaagtagaattggcgaaactggaccaagagcgagtc
agagaccgtatcgctcttgagcgagagcgttcgtatgctgaaaacatcatcaccaagata
gaggatatcctgttaacgacacagaccacagaggaagagaaatgcactacaatgcagtat
gtcatctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctggag
tccaaacgggtccggatcaactttctccccaagatcaagaaaagcatcaagacagaaaaa
gaaggagaggaaaaggtgaagaaacccagatttcccagtatccttggacctcagcgtcgg
cccagccgcattgaagcaggaccagtgggtaaagccttggatggtcgcccccggcctcag
aaacaattgtctcagcctacacttggggcaagtgagcacatggaacctgggcgtctaaga
ggcagccaatcgagcgagggctctgaactcacacactccatgtctgtcaacagctcatcc
cctaacagcgccacctatagctcagacaatagccgggatgctgatacgggtgggactctg
acctcaggcccctccaggctgagtgacggccttcagtccgaccctctggatgggttgtcg
taccctgcttcgcactttgacctttacagcctggaccaactgcaagaggatgacagagaa
agcgacagagcccatgagggaacaccaaaggccataagaaggcttgagggacttggtgct
gctgatgtccagagtgaggacgaccagggaactgactctgagcatgaccccccaaactgg
cagcagctggtggggcgagaagtcctggcggttctccggccacatgaaattaagagacag
gaagtcatcaatgaattgttttacacagagcgtgcacatgtgcggatgctgagagttttg
gaccacgttttctaccagaaactctccaaagaggccatcctgcctcctgctgacatcaag
aacatcttcaccaacctggaggagattctgcagctgcatgtttcaatactggagcaaatg
gcagctattcggaaaagaaatgagtcttcagtaattgatcagataggagacgacttgctc
tcttggttcagtggtggagaggaggagaagatcaagcaggcggtggggacgttctgcagt
aaccagccttttgctctggagatcatcaagaccaaacagaagaaagactcaaggttcact
tcgttcatccaggaggcagagagtaacagactgtgtcgccgactgcagcttaaagacatc
attcctgtagagatgctgcggctcaccaagtaccctctgctactagacaacatcgccaag
tacacagacaacacaacggagagggacaaagtgaagcaggcagcagactgctgtaggaag
atcctaaatcacgtcaaccaggctgtgaaggaatccgaggacaagcagaggttggaggac
tatcaaagaagattggacctctcctctttaaagcagacagacaaccccatgatcctggag
ctaaagaacctggatctgaccaagaaaacaatggtgcacgaaggaccactgtcatggaaa
gtgaacaaagacaagactattgagttgtacacactcctcctggaggacatcctggttctg
ctacagaaacaagatgagcgtctgatcctgaagtgtcacagcaaaaacctggcaggcact
gcagataccaaacatatcttcagcccaatcatcaaactcaacactgtcctggtgcgctcg
gtggccacagacaacaagtcctttttcgtcctttccatgtcagacaacggagcccagatc
tatgagctgatggcgcctacagtctcagatcagagaacgtggcagcgtctaatcacccag
agagctgatgccatgaaagtcaaacctcacagcgtcataccattacctcagaccgatggg
gagagagacagtgtggggatcattacaacaggtggttccaggctgagcagagaccccgac
cgtacgtccaccggcagcacccagtccacagataaagagagcagtccagcctctagaagt
gcgatgcagagctctctacctggtaataatccatttgagaaggaagaggaggaggaggaa
ggttttgtggacccagagcttccttaccaagtggctgaggacggcagagagggagactca
tttaacatatttccctcccgagcagacgaagcactgaaaacattggctgcattaaagcag
gtgttggtgacccagttaatgtcccaggaggctgcagagcaaaccaaacgctccacaggg
gctcgtctcctcaggaccacctctttgcggacccccgtagacagccgcgcgcgggtgatg
gtccacaacggctcagagaagaacagctctcaaacagaggacccggctcaggacctgggc
tctggggacacaggcttctttgacactcctgaggattatgcaggatacttagtcctggag
ggttacggtggcccaggggagagcagcacagatgatgacatcttggcatcaacaacaggg
aagcagctgagcacctcacaaggctgtgccgccgactctggcatcaatttgaggttttct
tcaacgtcacaggctggcagcctctcctctttcagcagacaggtcctatctcaccttaga
aaccttcagtccaacctaaactatctgaaggaggttgaggccaagtacaataatctaata
cgccaaaggccagagaggtcagcagcagacacggatggaaacaaagataagagatag
DBGET
integrated database retrieval system
