Seriola lalandi dorsalis (Yellowtail amberjack): 111652805
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Entry
111652805 CDS
T06058
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111652805 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
slal04054
]
111652805 (dhx58)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111652805 (dhx58)
Pattern recognition receptors [BR:
slal04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
111652805 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
111652805
NCBI-ProteinID:
XP_023258948
Ensembl:
ENSSLDG00000017659
UniProt:
A0A3B4XVR3
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MADFDLYTYQEEVVERALQRENIIIWLPTGGGKTRAAVYVAKRHLETTERAKVVVLVNKV
HLVDQHYKKEFKPHLDQNYKVVPVSGESDEKDFFGKVVQKSDVVICTAQILYNALTNTEE
TKHVELSDITLLIIDECHHTHKESVYNKVMRFYLEKKLKGERRLPQILGLTASPGTGGAK
ILNRAVEHVLQICANLDSAIVSTKNYAPELKRKVPRPIKSFDIVEKRPADPFGSHLKWMM
ELIHEYMNLPPDFKLRECGTQEYEADVVILEKRGVKEDNRLLAQCALHLRQYNDALLIND
TLRMMDAYCSLEDFYSTKLTRTIDGTDLFLVGLFQENQVELKKIAQDSRYENPKMAKLES
VLLKQFGQGVQSRGILFSKTRRSTYCLNDWVLNNRALQQAGIKATILTGAGNGSTYMTQN
EQAETIRNFRDGTLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAQNSQ
YSVVAMRGGREERREITNEYLEELTREAIAKVQEMNLQDFHRKINELQIQAVISSRVAEN
QKTEKRSRYTASSIQFLCRNCFKSVASGSDIKLVDNAHYVNVNPDFEKHYKAGGQVKIPR
SFEDWEPGRTISCNNGNCNKDWGFEMKYKKIALLPNLAIKNFALQTPDGRITVKKWKDVQ
FNVEDFSFNQYCQDYYPDLLD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttgatctgtacacataccaggaggaagtggtcgagagggctcttcagaga
gagaacataatcatctggctgccgacaggaggtggaaagacccgcgctgctgtgtatgtg
gccaaaagacatctggagaccactgagcgggcgaaggtggtggtcctggtgaacaaggtt
caccttgtagaccaacattacaagaaagagttcaagcctcacctggaccaaaactacaaa
gtggtgccagtcagtggagagagtgacgagaaggacttctttggaaaagtggtgcagaag
tccgacgtggttatctgcacggcacagatcttatataacgctctgactaacacagaggaa
accaaacatgtcgagctctcagacattactctactgataattgatgagtgccaccacacc
cacaaggagtcagtctacaacaaggtaatgagattctatttggagaaaaagttgaaagga
gaacgtcgattgccacagatcttgggtctcactgcatcaccgggtacaggaggcgccaag
atcctgaacagggctgtggagcatgtcctgcagatttgtgccaacttggactcagccata
gtctcaactaaaaactatgcccctgagctgaagaggaaggtacccagacccatcaaatca
tttgacattgtggagaaaaggccagcggatccatttgggagtcatctgaaatggatgatg
gagctgatccacgagtacatgaacttacctccagacttcaaactcagagagtgtggcaca
caggagtatgaggcagatgtggtgattttagagaagcgaggggtaaaagaggacaacaga
ctgctggcacaatgtgcactccacctcagacagtacaacgacgccctgctgatcaacgac
accctgcgaatgatggatgcttattgctccctggaggacttctacagcacaaagttaacc
agaaccatcgacggaacagacctcttcctggtgggacttttccaagagaatcaggtggag
ctgaagaaaattgcacaggattctcgttacgagaacccaaagatggccaaacttgagagc
gttctgcttaaacagtttggacaaggcgtgcaatcaagggggatcctcttcagtaaaacc
cgtagaagcacttattgcctcaatgactgggtcctcaacaacagagccttacagcaagct
ggcatcaaggcaaccatcctcactggggctggcaatggcagcacttacatgacacagaac
gagcaggcggagacgatccgcaatttccgcgacggtactctcaaccttctgatctccacc
agtgtggctgaggaaggccttgacatccctgaatgcaacctggtggtgcgctatggactg
cttacaaatgagattgcccagcagcaggccagtggacgtgcaagagcccaaaacagccag
tattcagtagtcgccatgagagggggccgggaagagcgccgagagatcaccaatgaatat
ctggaagagctgactcgagaagctatcgctaaagtccaagaaatgaacctccaagacttt
cacagaaagatcaatgagttacagatacaggcagttatcagcagtagagttgcagagaac
caaaaaacagagaagaggagtcgctacactgcttccagtatccagttcttgtgtcgaaac
tgcttcaagtctgtggcatctggcagtgacattaaacttgttgacaacgcgcactatgtc
aatgtcaatcctgactttgagaaacactacaaagccggcggacaggtgaagattccaaga
agttttgaggactgggagcctgggcgcacgatcagttgcaataatggcaactgcaacaag
gattggggatttgagatgaagtacaagaagatcgccctgctgcccaatctagccattaag
aattttgccctgcagacccctgatggcaggataactgtgaagaagtggaaggatgtccaa
ttcaatgttgaggacttcagctttaaccaatactgccaagactactaccctgacctcctc
gactga
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