KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111652822
Entry
111652822         CDS       T06058                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04137  Mitophagy - animal
slal04144  Endocytosis
slal04145  Phagosome
slal04148  Efferocytosis
slal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111652822 (rab5c)
   04145 Phagosome
    111652822 (rab5c)
   04137 Mitophagy - animal
    111652822 (rab5c)
   04148 Efferocytosis
    111652822 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111652822 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slal04131]
    111652822 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slal04147]
    111652822 (rab5c)
   04031 GTP-binding proteins [BR:slal04031]
    111652822 (rab5c)
Membrane trafficking [BR:slal04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111652822 (rab5c)
 Endosome - Lysosome transport
    111652822 (rab5c)
Exosome [BR:slal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111652822 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   111652822 (rab5c)
  Exosomal proteins of colorectal cancer cells
   111652822 (rab5c)
  Exosomal proteins of bladder cancer cells
   111652822 (rab5c)
GTP-binding proteins [BR:slal04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111652822 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 111652822
NCBI-ProteinID: XP_023258966
Ensembl: ENSSLDG00000017771
LinkDB
Position
Unknown
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQESQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQAGAGTAGRARGGVDLQETAPHGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggaccggcacggaccaacggcactgcagcaagcaacaagatttgc
cagtttaagctagtgctgttgggggaatcagcagtggggaagtccagcttggtgctacgc
tttgtcaaaggccagttccatgagtaccaggagagcaccattggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtaaagtttgagatctgggacactgcaggacag
gaacggtatcacagtttggcacctatgtactacaggggagcccaggccgccatcgttgtc
tacgatatcaccaacacagacacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagcccaaatattgttattgcactggcagggaacaaagcagacctggccaac
aagagagctgtagatttccaggaatcacaagcatatgcagatgacaacagtttgctcttc
atggagacttcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagcttcctaagaacgagcctcaggctggagcaggcactgctggacgagcccgaggcggc
gtggacctgcaggaaactgcaccgcatggcagaagtggccagtgttgtggaggcgggaac
taa

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