Seriola lalandi dorsalis (Yellowtail amberjack): 111652881
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Entry
111652881 CDS
T06058
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
slal03037
]
111652881 (ift88)
Cilium and associated proteins [BR:
slal03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111652881 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_14
TPR_6
TPR_7
TPR_16
TPR_11
ANAPC3
TPR_9
SNAP
ARM_TT21_5th
TPR_17
TPR_CcmH_CycH
TPR_10
TPR-S
ARM_TT21_4th
ARM_TT21_C
MIT
TPR_15
ARM_TT21
HAT_PRP39_C
ARM_TT21_N
DUF2225
TPR_MalT
Consortin_N
HEAT_Nup120
RNPP_C
SHPRH_helical-1st
ARM_TT21_2nd
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
111652881
NCBI-ProteinID:
XP_023259035
Ensembl:
ENSSLDG00000019181
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MENVHLALEEDDLYSGYNDYNPTFDSEELENDLGFQQAVRTSHGRRPPMTAKFPGTAIGA
RPIASSFGSRVPMTSSMGRPMTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSKGP
APPLEAKNDDTPEEKIKILEKKVNDLIEESCMAQSVGALQLALEKAKEAGRKERMLMRQR
EQSGNADHINLDLTYSVLLNLANQYANNEMFPEALNSYQVIVKNKMFSNAGRMKVNMANI
YFKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRMGQYSDAITSFEHIMSES
PNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDEEDKYIPSNDDTNANMVIEAIKN
DKLHQMERDLKVLAEKYIMTAAKLIAPAIETSFATGFDWCVDMVKSSQYVELANDLEINK
AITYLRQRDFNQVEAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYSDLAMNA
DRYNPAALINKGNTVFSKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRLEEALD
CFLKLHAILRNSAQVMFQLAHLYELLEDPQQAIEWLMQVISVTPTDPQALAKLGELHDGE
GDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLNEVQEYATKLKKVEKM
KEIKEQRVKSGREGSARGRREGREGSAGSAGISTPVLTSPKKASVMVSQSESKQLSPLLD
SERDSSHSSNSTKGERLSAKMRSLPASNEPYEASSQKELDASYVDPLGPQMERPKTGAKK
RMEDDDFADEELGDDLLPE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcatctggctctagaggaggatgatctttattcgggttacaacgactat
aatccaacatttgactccgaggagttggagaatgatttgggcttccagcaagcagtgcgg
acaagtcatggaagaagacccccgatgactgccaaatttcctggcactgctattggagct
cggcctatagcttcttcctttggatctcgggtccctatgacctcttccatgggcagaccc
atgactggagctgtgcaggatggagccgcccgaccaatgactgctgtcagagcagcaggt
tacacctcctccctgacccgtggctcaacctttgaccctctaggccagtccaaaggccct
gcacctccacttgaagcgaagaatgatgacacgcctgaggagaaaatcaagatcctggag
aagaaagtgaatgacctgatagaagagagctgcatggcacagagtgtgggagccttacaa
ctggctcttgaaaaagccaaagaggcaggcaggaaggagcgcatgctgatgagacagagg
gaacagtctggcaacgcagaccacatcaatttagacctcacctactcagttttgctcaac
cttgccaaccagtacgcgaacaatgaaatgttcccagaagccctaaacagctaccaggtc
attgtgaagaacaagatgttcagtaatgcaggccgaatgaaagtcaacatggccaacatc
tacttcaaacagaaaaactaccccaaagccattaagttctaccggatggcactggatcag
atctccaacgctcacaaggaaatgaggatcaagatcatgcagaatatcggcgtggtcttc
gtccgcatgggccagtactcagatgccataacgtccttcgaacacattatgagtgagagc
cccaatatcaagacgggcttcaacctcatcctgtgctactacgccatcggtgacagggag
aggatgaagaaggcctttcagaagctcatttctgtccctctgggcattgatgaagaagac
aagtacatcccatctaatgatgacaccaacgcaaatatggtcatcgaggccattaagaac
gacaagcttcaccagatggagagagacctaaaagtcctcgctgagaagtacatcatgacg
gcagccaagctcatcgccccggctattgagacttcctttgctactggatttgactggtgt
gtggacatggtgaagagctctcagtatgttgagcttgccaatgatctagagatcaacaaa
gccatcacctatctgagacagagggacttcaaccaggttgaggcagtagaaaccctgaaa
acatttgagaagaaggacagcagagtgaagagcgctgcagccaccaacctctcttttctc
tacttcctggagaaggactacgaccaggctgaccgatattctgatctcgccatgaacgct
gatcgctacaacccagcggcactcatcaacaagggcaacactgtgttctccaagcaggac
tatgaaaaggctgcagagttctacaaagaagcactgaggaatgattcctcctgcaccgag
gccctctacaacctgggcctcacctataagaaactgaatcgcctggaggaggctctggac
tgcttcctgaagctccatgccattctgaggaacagcgcccaagtcatgttccagctggcc
cacctctatgagcttctggaggatccccaacaggcaattgagtggttgatgcaggtcatc
agtgtaactcccaccgacccccaggcgctggccaaattgggggagctgcatgatggcgag
ggggacaagtcccaggctttccagtactactacgagtccttcaggtacttcccctccaac
atcgatgtgattgagtggctcggagcgtactacatcgagacccagttctgtgaaaaggcc
attcagtactttgaaagagccacactcatacaaccaacacaggtgaagtggcagttaatg
gtggcgagctgctacagaagaagtggaaactaccagaaagctctggaaacgtataaagac
atccaccgcaagttcccagaaaatgtagaatgtctgcgtttcttggtgaggctgtgcaca
gacatgggactgaatgaagttcaagaatacgccaccaagctgaagaaagtggagaagatg
aaggagatcaaagaacagagggtgaagtcggggcgagaaggcagcgccagaggtcggaga
gaaggcagagagggcagcgctgggagtgctggcatctccacacctgtcctcacctctcct
aagaaggccagcgtcatggtatctcaatctgagtctaaacaactcagtccactgttggac
tcagagagagacagcagccacagcagcaacagcactaaaggagagcggctgagcgccaag
atgaggtcacttcctgcctccaatgagccctacgaggccagcagccaaaaagaactagac
gcgtcctatgtggacccactggggcctcagatggagagaccaaagaccggagccaagaag
cgcatggaggatgacgactttgcagatgaagagctgggagacgacctgctgccggagtag
DBGET
integrated database retrieval system
