Seriola lalandi dorsalis (Yellowtail amberjack): 111652904
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Entry
111652904 CDS
T06058
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111652904 (vps13a)
Membrane trafficking [BR:
slal04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111652904 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
111652904
NCBI-ProteinID:
XP_023259064
Ensembl:
ENSSLDG00000019834
UniProt:
A0A3B4YBG4
LinkDB
All DBs
Position
Unknown
AA seq
3277 aa
AA seq
DB search
MVFESLVVDVLNQFLGDYVVNLDSSQLQLGIWGGDAVLTNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKLKAAEQENPTLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTSDENWNPSLLDENSRLFFKCVQLDSLFAYWNVNSTLFSNHSADEALQCLQSSME
IHSSLPVNHDFIFRPISADAKLRMNPRSDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPVVHVHRNAHIWWRYVITGILEVNVKPRLVMWSWQHIRHHRQ
MVKRYRELYKTKITSKKPSEELLKQLEVPEKTLDIFNITLARQQAEVEASKAGLRIYRPG
IKMEEEESQGWFSWMWSWGGEADTQTKDSKTGGFDELLTSAEKSKLYTAIGYSETAVNPN
LPKNFEDMKVNFHMERLSVSIKDNKDKNEIIKLTVGELKSTLTQRPGAQAIKLTAQLSLF
EVTGLASNRPAPILLSSRKAATGAGTPLLCILFETNPLDEKANQRLHVESQPLEIIYDAI
TVNSMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKILDLNVNLMASYV
IIPQTGFYNGTQNILLLDLGHFQMSSQSRKHLPQLSVCASNIEDIMSMAYDSFDIQLSSL
QFLYSKPDGDWKMARKQKRSPLHILEPVDLKMDFCRAMVVKDSRMAKYKMSGELPLLSLR
ISDDKLRSVLELVESIPLPESRPAARGPSSTSKTKQSFTPQLTPRRPLNLADQRSSLIFE
SCETISITSLGSEEDLFYDAPSSPIGDRPFFPDNPMPLRYADLHKRKSLIKEESQKNMTD
FIMKFEISEFSVQLCRLSGDQEVTVLHLDIEGLGTELKVRTFDMTSNTYLREICLKCPEY
MDSEDKQVQLITTLDNTEVDLLTLEYIKADKNGPEFKSLHNNTEQLIKVTFSSLDVHLHT
EALLNTMNFLNKLLPESTKKEGGPEELPTIPEEDEAEAEREGEKKEEATVTKKRSSRSTK
FADVVTLHIRADLRCLKVFIRGQKARISEISIEGLVSQVLMRKKEMEVLANLKNIVILDC
DKDAFYKKAVSIADKEVFDFRMVNYTDATEGDAYLDMSKVDTSVSLTVGCIQVIFLNKFV
SSILAFINNFQEAKEALAEATAQAAEKAASGVKELAERSTRIALNVHFNAPVIFLPQSSS
SSNVIVADLGLLSVKNRFSKQPCTSDAKIPPVVDIMTVRLTDLKMFRTTYINERFQGETQ
LLKPVSLDLEIQRNLSSNWYHSIPDIEITAHLKPMTLILSQDDMIVVLRTLSENLSEKSD
AVPPPASLPTTEPSSDSVSNKESQGSGTTGPPSSNTVVIAAVVETQKNSKLKSTLKLDFK
FDSMTLVVYSPNGNEIQLLDSHDEQLKLAEFTLGTISTSVHMFSDSSMKASVRLSACLLD
DKRPRIKMVTPRMMAMRPGAEQNMMVEVNYRQTRESTTLDTVVQDVYLCASMEFLLTVAD
IFLKATQQGFAQVPQHKSSTGAGEKKNMNSSVTSKESAAPPAVVTKTEMNVVVRNPEIVF
VADLTRADAPALVMTTQCELIMKSGAERSQMTAVIKDLKVVACPFLREKRRNNVTTVLQP
CQVFFQSTQSPTTPQAMEVSINALTLKVSPIIINTVITIQSALTPTAETPEELDSPVPID
LWEKRGWKELKLWFLEEEGDEDTRSLVPLIPQGESLQVTIKSICLTLEAGVGHRTIPMLL
AKSSFHGDVTNWSTLINLHSELDLEVHYYNEEMGVWEPLLEPLEDDTKDGFRPWRLELKM
KKKPVKYTFLSDEVDYNVPDYKTVIVISSKDQLNIMLSKCGLAMLGNLGTAFAEAAKQTA
ECFQKDEAPFVVKNRLGLPVSVRHSEMFSPISRQSTNWTVELQDGETLGMDYTTTTDSDQ
FSAMISLSGKDYYIQPTPVGHTSASVIPLIKVGRGMYSVMHKDSGVTRFLVCQIYSVEGS
KYIKIRSPFQIINHFTIPFKVFEGSTCLGTALPTEEFCVPLDSYRSELSLQPITEDDTDA
QAAEFECSEGFSYEDVSNKQPETHLQQTCRRRGDQGGVMMINIVPLRDAVTFKHTGGIGE
NFDVPFVLHLWPSILLRNLLPYPIAYNLKDSGVSAPEATLNPGHSAQLHTAVINQSRLSL
RLLDYLAQDWSSEYSLHSDQEEITFIVFQSLRDDDEDDGEGTERKRAELDIAVHVKYDPG
QTVIAIHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLRNNKVRLMISD
SELSDDFSLDTVGSHGDVKCKGRYKDYLVGVKIDTSSFSLTRIVTFVPFYMLVNRTKHSV
FICEEGQDNWTEAQPEQSAIPFWPENDTKRLKIKVEGCLSPPRTIDFTRPENCLLLHLDN
SVGGITVDVNLSDHSATIRFSEYHDGAAPFLIINHTKDQTLQIHQSARTETTWVADELLD
LSFSVEEDSSQKITQQEELEAGKAVHYTWAEPTGSRELCWKCGTYSGKLKSEEDLREDIN
NDRKLFVISFYEGLQRVVLFTEEQRIYKLLCESEKAQLAEQEIILSLKNMGVSLVNNSSS
QEVSFIGITSSDVVWELKPKKKGRWKTLSTKEAELLENSFKEYIESAPVDYAIVDLENNF
QVSFTPNGMDMRMLQPCDAPLRRHFLPGVKVEYSVSPRQRAYRVQIHRIQIQNQLPGAIF
PYVFYPVKLPKSITMDSEPKPLTDISIVTRAAGHSDISRIKYFKVLIQEMDLKLDLGFLY
AILDLFTPENASITSSEQEVELFEKDIEYIKTELNHVSAADTSPTSLYEYFHISPIKLHL
SFSLSTGGEDGLKEKRDTELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFQFCTTQ
QLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEF
VEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNKQPSGLRE
GLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMAS
SAFQGIKRAAETSQDIESLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRFAKYRYFA
HAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKEPMIVEDRRLRIEAKERVK
SVFHAKEFGKIINFKTPEIAKWVLAKLEDARDSLPKY
NT seq
9834 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaaagcttggtggtagatgtcctgaaccagtttttaggagactacgttgtc
aatcttgacagctcacagctacagcttggcatatggggaggtgatgctgttcttacaaat
cttgaaataaaggaaaatgccttgagtcagcttgacattccttttaaagtgagagccggt
catataggacggttggagcttaagataccatggaagaacctctacacccagtcagtggag
gccacactggatggtgtctatctgctcatagtccccacagcaagtataaagtatgatgca
gaaaaagaggagaaacagctacaggaggctcgtcagagggagctacaacggatagaggag
acaaagctgaaggctgctgaacaagaaaaccccacgttagagaagcaggacacctttgtg
gaaaaacttgtcactcaggtcatcaaaaacctgcaggtcaagatctctaacatccatgtg
cggtatgaagatgatgtcaccaatccaaattgtcctttgtcatttggagtgtcacttaaa
aacctcagcctacagacatcagatgagaactggaatcccagtttgttggatgagaattcc
aggcttttcttcaagtgtgttcaactagacagcttgtttgcctactggaatgtcaactca
accctcttctccaatcacagtgcagatgaggccttgcaatgtcttcaaagcagcatggaa
atccacagctctcttcctgtcaaccatgacttcatttttcgtcccatctcagcggacgct
aaactacggatgaatcccaggtcagatgtggatttctcctcccctaaagtggacctcatg
gtcaatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcttggag
ttgctgggctcagtggatatgatgtcccggaacctgccatacaggaagtacagacctgtg
gtccatgttcataggaacgcccacatatggtggaggtatgtgatcacaggcatcttggag
gtgaatgtgaagccacgtctcgttatgtggtcatggcagcacattcgccaccacaggcag
atggtcaaacgatacagggagctctacaagacaaagatcaccagcaagaaacccagcgag
gagctgctcaaacagctagaggtgcctgagaagaccttggatatttttaacatcacattg
gccagacagcaggctgaagtggaggcgagtaaggcaggcctgcgtatttaccgtcctggg
ataaagatggaggaagaggagtctcagggttggttcagctggatgtggagctggggagga
gaggctgatacacaaacaaaagactctaagactggaggttttgatgagctgttaacctct
gctgagaaatccaaactctacactgccattggatacagtgagactgctgttaatcccaac
ctaccaaagaattttgaggatatgaaggtgaacttccacatggagaggctgtctgtgtcc
atcaaagacaacaaggacaaaaatgagatcattaagctgacagtgggagagctcaagtcc
acgctcacacagagacctggagcacaggccatcaaactcacggcccagcttagtttgttc
gaggtcacaggcctggccagtaaccggcctgcaccaatcctcctttcatcaaggaaggca
gccactggagcaggaaccccgctgctttgcatcctgtttgagaccaacccactggatgag
aaagcaaatcagcgacttcatgtggaatcacaacccctggaaatcatctatgatgcaata
accgtgaacagcatgtcagcattcttcatgcctcctgacgacctgcagctggatgagctc
accaacgcaaccctgatgaaactggagcagtttagagaccgaacagccactgggctaatg
tatgtgatcgaaacacagaaaattctcgacctgaatgtgaacttgatggcgtcctacgtc
atcattccacagactggtttttacaatggcacccagaacatcctactgttggatcttgga
cattttcagatgtccagtcaaagcaggaagcatctgcctcagctgtcagtgtgcgccagc
aacattgaagacatcatgtcgatggcatatgacagctttgacatacagcttagcagcctg
cagttcctttatagcaaaccagacggtgactggaaaatggcccgtaagcagaaacggtca
ccgctccacatcctagagccagtggatctaaaaatggatttctgccgggcgatggttgtc
aaagactcccgcatggcaaagtataagatgtctggagagcttcctctgctgtctcttcgt
atttctgatgataaacttcgaagtgttctggagctggtagaaagtatcccactgcctgag
agcagacctgctgcacgcggcccatcctccacttcaaagacaaagcagtcgttcacaccc
cagctcactcccagaagacccctgaacttagctgatcagcgctcctcactcattttcgag
tcatgtgagaccatcagcatcacctctttggggtcagaggaagatttgttctacgatgct
cccagctctcccatcggtgatcgaccattcttcccagacaatcccatgccgctgcgctac
gcagacttgcacaaaagaaaaagtctgatcaaggaagaatctcagaagaacatgactgac
ttcatcatgaagtttgaaatcagtgagttttccgttcagttgtgtcgcctgtctggggat
caggaggtcacagtgctccacttggacatagagggtctgggcactgagttgaaagtacgg
acctttgacatgacatcaaatacataccttcgagagatctgcctcaagtgtcctgaatac
atggattctgaagacaagcaggttcagctgataaccactctggacaacacagaggttgac
ttgctcaccctggagtacatcaaagctgataagaatggcccagagttcaagtctctacac
aacaatacagagcagctcatcaaggtgaccttttcatccctggatgttcatctgcataca
gaggctctcctcaataccatgaacttcctcaacaaactccttcctgaatccactaagaag
gagggagggccggaggaactccctactatccctgaggaggacgaagcagaggcagagagg
gagggggagaagaaagaggaagctactgtaaccaagaaaagaagttcaaggagtacaaag
tttgctgatgtggtgactctgcatatcagagctgatctgcgatgtctgaaggttttcatt
cgaggacagaaagccaggatctctgagattagtattgagggtctggtttctcaggttctg
atgcggaagaaggagatggaggttctggccaacctgaagaacattgtgatcctagactgc
gacaaagacgccttttacaagaaggcggtatctatagcagataaggaggtgtttgacttc
cgcatggtgaactatacagatgcaacagaaggagacgcatatttggacatgtctaaagtc
gacacctctgtctcactgacggtgggatgcatccaggtcatcttcctcaacaagtttgtc
tcttctatattggcgttcatcaataacttccaggaggccaaagaggccttggctgaggcg
acagcccaggctgcagaaaaggcagcgtcaggtgtgaaggagctggcagagcgaagtact
cgaattgctctgaacgtccacttcaatgcacctgtcatcttcctcccccagtcctcttct
tcctccaatgtcattgtagctgaccttggtctgctgtctgtcaagaaccgtttttccaag
cagccatgcacaagtgatgctaagatcccgcctgttgtggatataatgactgtgagactg
actgacctcaagatgttccggaccacgtacataaatgaaaggtttcagggagagacccaa
ctgctaaagccagtcagcctggacttggaaatccagagaaatctttcttccaactggtac
cacagcatacctgacatagagatcactgctcatctaaagcccatgactctgatcctcagc
caggatgacatgatagtggtcctgaggactctgagtgagaacctgtcagagaagtctgat
gctgttccacctccagcttctctacccaccactgagccctcctctgactcggtatccaac
aaagagtcccagggctctggaaccactggaccacccagtagtaacacagtggtgatagct
gctgttgtggagacccagaaaaacagcaagctgaagagcacactcaagttggacttcaag
tttgactccatgacactggtcgtgtacagccctaatgggaatgagatacagctgttggac
tcgcatgatgagcagctgaagctggcagagtttaccctgggcaccatctccacctccgtc
cacatgttctccgacagctccatgaaggcctcagtccgactttctgcctgccttcttgat
gacaagagacccagaatcaagatggtcacgccaaggatgatggcgatgcgtccaggtgca
gaacagaacatgatggtggaggtgaactatcgtcagacccgtgaaagcaccacgttggac
acagtggtgcaggatgtgtacttgtgtgccagcatggagttcctgctcactgtggcagac
atctttctcaaggccacccagcagggttttgctcaagtgccacaacataagagcagtact
ggagcaggagaaaaaaagaacatgaactcctctgtcacatccaaagagtccgctgcccct
ccagccgtggtgacaaagacagagatgaatgttgtggtgcgtaacccagagattgtgttt
gtggccgacctgacgcgtgccgacgcccccgccctggtgatgaccacgcagtgtgaactt
ataatgaaaagtggggcagagagatcacagatgactgctgttatcaaggacctcaaggta
gtggcgtgtcccttcttgagagagaagaggaggaacaatgtgaccacagtgctgcagcca
tgtcaggtgttctttcagagtactcagtccccaaccacacctcaggctatggaggtctcc
atcaatgctctcacactgaaggtatctccaatcatcatcaacacagtgatcaccatccag
tcggcactgactcccacagcggagacccctgaggagctggatagtcctgttcccattgat
ctctgggagaaacggggctggaaggagctcaaactttggttcctagaggaggagggggac
gaagacacaaggtcactggtcccactgataccacaaggagagtcattacaggttaccatc
aaatcaatatgtctgactctggaagctggtgtgggacatcgcaccatccccatgcttctg
gccaagtcctccttccatggagacgtcacaaactggtcgacactcattaacttacacagc
gagctcgacctggaggttcactattacaatgaagaaatgggagtatgggaaccgctgctg
gagccattagaagatgatacaaaagacggtttcagaccatggagacttgaactgaagatg
aagaagaagccagtgaagtacacatttttgtcagatgaagtggattacaatgttccagac
tataagacggttatcgtcatcagcagtaaagaccagctcaacatcatgctctccaaatgt
ggactggccatgctgggtaacctgggcacggcatttgcagaggctgccaaacagacagct
gagtgcttccaaaaggacgaagctccgttcgtggtgaaaaaccgcctgggcctgccagtg
tctgtccgccacagcgagatgttttctcctatcagccggcaaagcactaactggactgtg
gagctgcaggatggggaaaccctcgggatggactatacaaccacaacagactccgaccag
ttctcagccatgatctccttgagtggaaaggactactacatacagcctactccggtgggc
cacacctcagccagtgtgatccccctgatcaaggtgggcagaggaatgtacagcgtaatg
cacaaagactcaggagtcactcgtttcctggtttgtcagatttactctgtggagggcagc
aagtacatcaagatccgctcacctttccagatcatcaatcatttcacaataccattcaaa
gtttttgaaggatcaacatgtctgggtacagcgctccctactgaggagttctgtgtgcct
ctggattcatataggtctgagctgagccttcagccgataacagaggacgacactgacgct
caggctgctgagtttgagtgctcagagggcttcagttacgaagacgtcagcaacaagcag
cctgagacacacctccagcagacgtgccgtcgccgtggagaccagggtggtgtgatgatg
atcaacattgtgccattaagggatgctgtgacattcaaacacaccggaggtattggggag
aacttcgatgtgccctttgtacttcacctgtggccttccatcctgctacgcaacctactg
ccttaccccatcgcctacaacctaaaggacagtggagtctctgcccctgaggccactctg
aacccaggtcactctgcccagcttcacaccgcagtcatcaaccagtcaagactcagtctc
cggctgctggactacttggctcaggactggtcttctgagtacagtctccatagtgaccag
gaagagatcaccttcatcgtgttccagtctttacgggatgatgatgaggacgatggtgaa
gggacagagaggaagagggctgagttagacattgcagtccatgttaaatatgacccgggg
cagacagtgattgctatccactctccttattggatggtgaataagactggcaggttgctg
cagtacaaggctgatgatatccaccgcaaacaccccctggactatgacatgcccctgctc
ttctctttcaaaccgcggtacttcctgagaaacaataaggtccgccttatgatatcagac
agtgaactctctgatgatttctccctggatacagttggtagccatggagatgtgaaatgt
aaaggcagatacaaagattacctggttggtgtgaagattgatacgagcagtttcagtctg
acccgcatcgtgacctttgtgcccttttacatgctggtcaacagaaccaagcacagtgtc
ttcatatgtgaggaagggcaggacaactggaccgaggcacaaccagaacagtcagctatt
cctttctggcctgagaatgacaccaagcggctaaagatcaaagtagaaggttgtttatcg
cctcctcggactattgacttcacacgaccagagaactgcctgttgctgcatttggacaac
tctgtgggtgggatcaccgtcgacgtgaacctatccgaccactcagccactatccgattc
tcagagtaccacgatggcgccgcccccttcctcatcatcaaccatactaaagaccagact
cttcagattcatcagagcgcccggacagaaaccacgtgggtggctgacgagctgctcgac
ctctccttctcagtggaggaggacagctctcagaagataacgcagcaggaggagctggag
gctggaaaagctgtgcactacacctgggctgaacccactgggtcccgagagctttgctgg
aagtgtggtacatacagtgggaaactgaagagcgaggaggacctgcgcgaggacattaac
aacgacagaaaactgtttgtgatctccttttatgaaggtctccagcgcgttgtgctgttc
accgaggagcaacgtatctacaagctgctgtgtgagagcgagaaggcacagctggctgaa
caggaaatcatcctgtcgctaaagaacatgggcgtgtctctggtcaacaacagcagcagc
caggaggtctcctttattgggatcacaagctctgatgtggtttgggaactaaagcctaag
aaaaagggtcggtggaagactctgagcactaaagaagctgagcttttggagaacagcttc
aaagagtacattgaatctgcacctgtagactatgccatcgtcgacctggaaaacaacttc
caggtgtcctttactcccaatggcatggatatgcggatgctgcagccgtgtgacgctcct
ctcaggaggcacttcctgcctggggtgaaggtggagtatagcgtctcaccacgacagaga
gcctaccgtgtccaaatccaccgcatacagatccagaatcagctgccaggagccatattc
ccctacgttttttacccagtaaaattgccaaagtctatcaccatggactcagaacccaaa
cccctgactgatatcagcattgttaccagagcagcagggcactctgatatctctcgtatc
aagtatttcaaggtgttgattcaagagatggatctgaagcttgatctgggcttcctgtat
gccatcctggacctgttcactcctgagaacgccagcatcaccagctcagaacaggaggtg
gaactgtttgagaaggacatagagtatataaagacagaactaaaccatgtctctgctgct
gacacctctcctaccagcctctatgagtacttccacatttcccccatcaagctgcacctg
agtttctctctaagcacgggaggagaagatggcctgaaggagaagagagatacagaactc
atccccgtccagtccctcaacctgctgctgaagagtatcggtgcaactctcactgatgtg
caggacgtcgtcttcaagctggccttctttgagttgaccttccagttttgcacaactcag
cagctacagtgggaggtcatcagacattattccaagcaggctattaaacagatgtatgtg
ctggtgctgggcctggatgtgcttggaaacccctttgggctgatcagaggactgtcagag
ggagtggaggccttcttctatgagccctatcagggagccatccaggggccggaagagttt
gttgaaggaatggctcttggggtgaaggctctggtgggaggagctgtagggggtatagca
ggtgcggcctctaggataacaggcgccatggcgaagggcgtcgctgccataacgatggac
gaggaataccagcagaagagacgagaagctatgaacaaacaacccagtggcctgagagag
gggctgaccaggggtggaaaaggactggtatctggatttgtcagtgggatcacagggata
gtgaccaaacctattaaaggagcccagaaggagggtgctgcaggcttctttaaaggtgtt
gggaaaggtctggtcggcgcagtagccagacccacaggaggcattattgacatggccagc
agtgctttccaagggatcaagagggcggcagagacttcacaagatattgaatcgctgcgt
cctcctcgtttcatccacgaggacggtgtcatacgaccatataaggagagggaaggcctc
ggcagtcagatgctccagaaaattgagaatggacgttttgccaagtacagatacttcgct
catgccaaggtcaatgattccgacttcctcatgatcaccaagaggggcatattttttgtg
accaaaggcacatttggccagctgacctgtgaatggcagtatctgtttgaggagttcacc
aaggaaccaatgattgtagaggaccgcagacttcgcattgaggccaaggagagagtaaag
tcagtcttccatgccaaagagtttgggaagatcataaacttcaaaactcctgagatagcc
aagtgggttcttgccaaactggaggatgcaagagacagtttacctaaatactga
DBGET
integrated database retrieval system
