Seriola lalandi dorsalis (Yellowtail amberjack): 111653221
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Entry
111653221 CDS
T06058
Name
(RefSeq) keratin, type II cytoskeletal cochleal-like
KO
K07605
type II keratin, basic
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111653221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slal04812
]
111653221
04147 Exosome [BR:
slal04147
]
111653221
Cytoskeleton proteins [BR:
slal04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
111653221
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111653221
Exosomal proteins of other body fluids (saliva and urine)
111653221
Exosomal proteins of colorectal cancer cells
111653221
Exosomal proteins of bladder cancer cells
111653221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
ADIP
CENP-F_leu_zip
CCDC39
FKBP15
FPP
CCDC113_CCDC96_CC
DUF4349
AAA_13
ATG16
Sec10_N
SlyX
ACBP4_C
HB_LcnD
CENP-Q
TolA_bind_tri
CALCOCO1
COG6_N
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
111653221
NCBI-ProteinID:
XP_023259466
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MTSYRTMSVKKVVSSSGGGGGGFSSGGGFSGGSSFGSSRMSVGGGGGGGYSSRSAISIRP
TIAMSSSSLRSSMGGGGGGGFGYGSGGGFGGGAGGFGSGYGVGLGGGGGGGFGGGFGGGL
GGGGGMAIAPITNVQVNSSLLAPLNLEIDPNIQTVRTQEKEQIKTLNNRFASFIDKVRFL
EQQNKMLETKWSLLQDQTTTRSNIDAMFEAYIANLRRQLDGLGNEKMKLEGELRNMQGLV
EDFKNKYEDEINKRATVENEFVLLKKDVDGAYMNKVELEARVDALQDEINFLRSVYEAEL
RELQGQIKDTSVIVEMDNSRNLDMDAIVAEVKAQYEDIANRSRADAESWYQQKYQEMQVN
AGQAGADLHSTKSEIAELNRMISRLQNEIESVKGQRANLEAQIAEAEERGELAVKDAKLR
IRDLEDALQRAKQDMARQVREYQELMNVKLALDIEIATYRKLLEGEESRISSGGGSATIH
IQSSSSGFGGGMGGGMGGGMGGGMGGGMGIGGGYGSGLSLGGGGGGYGSGMSMSGGGMGL
SSMSIGGGGGSSISQRSSTIVSSRRY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctacagaactatgagcgtgaaaaaagtcgtttccagctcaggcggtggtgga
ggtggtttcagtagtggaggtggtttcagtggtggaagcagtttcggtagcagccgtatg
tctgtaggaggaggaggaggaggaggatattcctcacgatctgccatttctataaggcct
acaattgcaatgtcttccagctcattgaggtcaagcatgggtggtggtggtggtggtggt
tttggttatggcagtggcggcggttttggtggtggcgctggtggttttggcagtggttac
ggcgtcggtctcggtggcggcggtggcggcggtttcggcggcggtttcggcggcggtctc
ggcggcggtggaggtatggcaattgctccaatcacaaacgtccaagtcaactcgagcctg
ctggcccccctgaaccttgagatcgaccccaacatccagactgtccgtacccaagagaaa
gagcagatcaagactctaaacaaccgcttcgccagcttcattgacaaggtgcgcttcctg
gagcagcagaacaaaatgctggagaccaagtggagcctgctgcaggaccagaccaccacc
cgctccaacatcgacgccatgttcgaggcttacattgccaacctgcgcagacagctggat
gggcttggcaatgagaagatgaagctggagggagagctgaggaacatgcagggactggtg
gaggacttcaagaacaaatatgaagatgaaatcaacaagcgcgccaccgtggagaatgag
tttgtgctcctcaagaaggatgtagatggcgcctacatgaacaaagttgagctggaggcc
agggttgatgcccttcaggatgagattaacttcctcaggagcgtctatgaggcggaactg
cgtgaactccagggacaaatcaaggacacctcagtcattgtggagatggacaacagccgc
aacctggacatggacgccattgtggctgaagtcaaggctcagtatgaggacatcgccaac
cgcagccgtgctgatgctgagtcatggtatcagcagaagtaccaggagatgcaggtcaac
gctggccaggctggagctgaccttcacagcaccaagagtgaaatcgctgaactcaaccgt
atgatcagccgcctccagaatgagatcgagtcagtcaagggacagcgtgccaaccttgag
gcccagatcgctgaggccgaggagcgcggtgagctggctgtgaaggacgccaagctccgc
atcagggacctggaagacgccctgcagagagccaagcaggacatggcccgccaggtccgt
gagtaccaggagctcatgaacgtcaagctggctctggacattgagatcgccacctacagg
aagcttctggaaggagaggaatccagaatttcctccggtggtggatctgcaaccatccac
atacagagctcaagcagcggctttggaggtggtatgggcggaggcatgggcggaggcatg
ggcggcggcatgggcggaggcatgggcataggcggcggctatggcagcggcctgagcttg
ggcggcggcggcggcggctatggtagcggcatgagcatgagtggcggcggaatgggcctg
tcaagcatgagcataggaggaggcggtggcagcagcatcagccaaagaagcagcaccata
gtctcttctcgccgttactaa
DBGET
integrated database retrieval system
